RNA–Protein interactions for RNA: ENST00000348022.6

RBBP6-202, Transcript of RB binding protein 6, ubiquitin ligase, humanhuman

TSL 1 (best) BASIC

Gene RBBP6, Length 5,739 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP6-202ENST00000348022 ERCC4Q92889 916 aaPredicted RBP5.79□□□□□ -1.48
RBBP6-202ENST00000348022 CDCA8Q53HL2 280 aa5.78□□□□□ -1.48
RBBP6-202ENST00000348022 KIAA1211Q6ZU35 1233 aa5.78□□□□□ -1.48
RBBP6-202ENST00000348022 SUPT16HQ9Y5B9 1047 aaKnown RBP5.78□□□□□ -1.48
RBBP6-202ENST00000348022 TCERG1O14776 1098 aaKnown RBP5.78□□□□□ -1.48
RBBP6-202ENST00000348022 EIF4G2P78344 907 aaKnown RBP eCLIP5.78□□□□□ -1.48
RBBP6-202ENST00000348022 HAP1P54257 671 aaPredicted RBP5.78□□□□□ -1.48
RBBP6-202ENST00000348022 CHMP4CQ96CF2 233 aa5.78□□□□□ -1.48
RBBP6-202ENST00000348022 RBM19Q9Y4C8 960 aaKnown RBP5.78□□□□□ -1.48
RBBP6-202ENST00000348022 GOLGA6L7A0A1B0GV03 622 aa5.77□□□□□ -1.48
RBBP6-202ENST00000348022 MIER1Q8N108 512 aa5.77□□□□□ -1.49
RBBP6-202ENST00000348022 CCAR2Q8N163 923 aaKnown RBP5.77□□□□□ -1.49
RBBP6-202ENST00000348022 GZF1Q9H116 711 aaPredicted RBP5.77□□□□□ -1.49
RBBP6-202ENST00000348022 IPO7O95373 1038 aaKnown RBP5.77□□□□□ -1.49
RBBP6-202ENST00000348022 HSP90AB3PQ58FF7 597 aa5.77□□□□□ -1.49
RBBP6-202ENST00000348022 CAGE1Q8TC20 777 aa5.77□□□□□ -1.49
RBBP6-202ENST00000348022 CSRNP3Q8WYN3 585 aa5.77□□□□□ -1.49
RBBP6-202ENST00000348022 TAOK2Q9UL54 1235 aa5.77□□□□□ -1.49
RBBP6-202ENST00000348022 MAPK8IP3Q9UPT6 1336 aa5.76□□□□□ -1.49
RBBP6-202ENST00000348022 CHGAP10645 457 aaKnown RBP5.76□□□□□ -1.49
RBBP6-202ENST00000348022 TSPYL1Q9H0U9 437 aa5.76□□□□□ -1.49
RBBP6-202ENST00000348022 NUDCQ9Y266 331 aa5.76□□□□□ -1.49
RBBP6-202ENST00000348022 KIF16BQ96L93 1317 aa5.76□□□□□ -1.49
RBBP6-202ENST00000348022 FAM13BQ9NYF5 915 aa5.76□□□□□ -1.49
RBBP6-202ENST00000348022 GOLGA6L19H0YKK7 550 aa5.75□□□□□ -1.49
RBBP6-202ENST00000348022 DEF6Q9H4E7 631 aa5.75□□□□□ -1.49
RBBP6-202ENST00000348022 PDE4CQ08493 712 aa5.75□□□□□ -1.49
RBBP6-202ENST00000348022 LEKR1Q6ZMV7 388 aa5.75□□□□□ -1.49
RBBP6-202ENST00000348022 DIAPH3Q9NSV4 1193 aa5.75□□□□□ -1.49
RBBP6-202ENST00000348022 IPO9Q96P70 1041 aaKnown RBP5.75□□□□□ -1.49
RBBP6-202ENST00000348022 PLCD4Q9BRC7 762 aa5.75□□□□□ -1.49
RBBP6-202ENST00000348022 MYO6Q9UM54 1294 aa5.75□□□□□ -1.49
RBBP6-202ENST00000348022 ATP6V1DQ9Y5K8 247 aa5.74□□□□□ -1.49
RBBP6-202ENST00000348022 TPD52L1Q16890 204 aaPredicted RBP5.74□□□□□ -1.49
RBBP6-202ENST00000348022 GSE1Q14687 1217 aa5.73□□□□□ -1.49
RBBP6-202ENST00000348022 SPRYD3Q8NCJ5 442 aa5.73□□□□□ -1.49
RBBP6-202ENST00000348022 RASSF8Q8NHQ8 419 aa5.73□□□□□ -1.49
RBBP6-202ENST00000348022 A0A0G2JS52 829 aa5.73□□□□□ -1.49
RBBP6-202ENST00000348022 HMGB1P09429 215 aaKnown RBP5.73□□□□□ -1.49
RBBP6-202ENST00000348022 FAM43AQ8N2R8 423 aa5.73□□□□□ -1.49
RBBP6-202ENST00000348022 MNS1Q8NEH6 495 aa5.73□□□□□ -1.49
RBBP6-202ENST00000348022 BECN2A8MW95 431 aa5.73□□□□□ -1.49
RBBP6-202ENST00000348022 ANKRD20A12PQ8NF67 263 aa5.73□□□□□ -1.49
RBBP6-202ENST00000348022 PES1O00541 588 aaKnown RBP5.73□□□□□ -1.49
RBBP6-202ENST00000348022 KIAA0754O94854 1291 aa5.73□□□□□ -1.49
RBBP6-202ENST00000348022 KNSTRNQ9Y448 316 aa5.73□□□□□ -1.49
RBBP6-202ENST00000348022 CCDC173Q0VFZ6 552 aa5.72□□□□□ -1.49
RBBP6-202ENST00000348022 FRAT1Q92837 279 aaPredicted RBP5.72□□□□□ -1.49
RBBP6-202ENST00000348022 GIMAP7Q8NHV1 300 aa5.72□□□□□ -1.49
RBBP6-202ENST00000348022 HOMER1Q86YM7 354 aa5.71□□□□□ -1.49
RBBP6-202ENST00000348022 ZNF777Q9ULD5 760 aaPredicted RBP5.71□□□□□ -1.49
RBBP6-202ENST00000348022 ISY1Q9ULR0 285 aaKnown RBP5.71□□□□□ -1.49
RBBP6-202ENST00000348022 KRI1Q8N9T8 703 aaKnown RBP5.71□□□□□ -1.49
RBBP6-202ENST00000348022 ZNF592Q92610 1267 aa5.71□□□□□ -1.49
RBBP6-202ENST00000348022 SLKQ9H2G2 1235 aaPredicted RBP5.71□□□□□ -1.49
RBBP6-202ENST00000348022 RWDD1Q9H446 243 aaPredicted RBP5.71□□□□□ -1.49
RBBP6-202ENST00000348022 SEPT11Q9NVA2 429 aaKnown RBP5.71□□□□□ -1.49
RBBP6-202ENST00000348022 NPHP1O15259 732 aa5.71□□□□□ -1.5
RBBP6-202ENST00000348022 IPO8O15397 1037 aaKnown RBP5.71□□□□□ -1.5
RBBP6-202ENST00000348022 ANKRD18AQ8IVF6 992 aa5.71□□□□□ -1.5
RBBP6-202ENST00000348022 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.71□□□□□ -1.5
RBBP6-202ENST00000348022 ST18O60284 1047 aa5.71□□□□□ -1.5
RBBP6-202ENST00000348022 SF3A1Q15459 793 aaKnown RBP5.71□□□□□ -1.5
RBBP6-202ENST00000348022 CCDC47Q96A33 483 aaKnown RBP5.71□□□□□ -1.5
RBBP6-202ENST00000348022 CHMP4AQ9BY43 222 aa5.71□□□□□ -1.5
RBBP6-202ENST00000348022 CREBRFQ8IUR6 639 aa5.7□□□□□ -1.5
RBBP6-202ENST00000348022 B4GALNT3Q6L9W6 998 aa5.7□□□□□ -1.5
RBBP6-202ENST00000348022 HMGN5P82970 282 aaKnown RBP5.7□□□□□ -1.5
RBBP6-202ENST00000348022 HDAC5Q9UQL6 1122 aa5.7□□□□□ -1.5
RBBP6-202ENST00000348022 CCP110O43303 1012 aa5.7□□□□□ -1.5
RBBP6-202ENST00000348022 GPATCH3Q96I76 525 aa5.69□□□□□ -1.5
RBBP6-202ENST00000348022 HOOK1Q9UJC3 728 aaKnown RBP5.69□□□□□ -1.5
RBBP6-202ENST00000348022 TIMELESSQ9UNS1 1208 aa5.69□□□□□ -1.5
RBBP6-202ENST00000348022 PMFBP1Q8TBY8 1022 aa5.69□□□□□ -1.5
RBBP6-202ENST00000348022 EZRP15311 586 aaKnown RBP5.69□□□□□ -1.5
RBBP6-202ENST00000348022 DHX8Q14562 1220 aaKnown RBP5.69□□□□□ -1.5
RBBP6-202ENST00000348022 SPATA24Q86W54 205 aa5.69□□□□□ -1.5
RBBP6-202ENST00000348022 DDX49Q9Y6V7 483 aaKnown RBP5.69□□□□□ -1.5
RBBP6-202ENST00000348022 FBXO3Q9UK99 471 aa5.68□□□□□ -1.5
RBBP6-202ENST00000348022 RABEP1Q15276 862 aa5.68□□□□□ -1.5
RBBP6-202ENST00000348022 CAVIN1Q6NZI2 390 aaKnown RBP5.68□□□□□ -1.5
RBBP6-202ENST00000348022 CLASRPQ8N2M8 674 aaKnown RBP5.68□□□□□ -1.5
RBBP6-202ENST00000348022 CCDC39Q9UFE4 941 aa5.68□□□□□ -1.5
RBBP6-202ENST00000348022 ZCCHC6Q5VYS8 1495 aaKnown RBP5.68□□□□□ -1.5
RBBP6-202ENST00000348022 MARCH6O60337 910 aa5.67□□□□□ -1.5
RBBP6-202ENST00000348022 ERLIN2O94905 339 aa5.67□□□□□ -1.5
RBBP6-202ENST00000348022 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.67□□□□□ -1.56e-6■■■■■ 48.1
RBBP6-202ENST00000348022 BCCIPQ9P287 314 aaKnown RBP eCLIP5.67□□□□□ -1.5
RBBP6-202ENST00000348022 GOLGA6L10A6NI86 522 aa5.67□□□□□ -1.5
RBBP6-202ENST00000348022 RRP9O43818 475 aaKnown RBP5.67□□□□□ -1.5
RBBP6-202ENST00000348022 EIF3JO75822 258 aaKnown RBP5.67□□□□□ -1.5
RBBP6-202ENST00000348022 SETSIPP0DME0 302 aa5.67□□□□□ -1.5
RBBP6-202ENST00000348022 PRKCSHP14314 528 aaPredicted RBP5.67□□□□□ -1.5
RBBP6-202ENST00000348022 RALBP1Q15311 655 aa5.67□□□□□ -1.5
RBBP6-202ENST00000348022 C14orf37Q86TY3 774 aa5.66□□□□□ -1.5
RBBP6-202ENST00000348022 PCMTD1Q96MG8 357 aaPredicted RBP5.66□□□□□ -1.5
RBBP6-202ENST00000348022 CT47B1P0C2W7 299 aaPredicted RBP5.66□□□□□ -1.5
RBBP6-202ENST00000348022 CFAP57Q96MR6 1250 aa5.66□□□□□ -1.5
RBBP6-202ENST00000348022 ODF2Q5BJF6 829 aa5.66□□□□□ -1.5
RBBP6-202ENST00000348022 RSPH4AQ5TD94 716 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms