RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 ARID3CA6NKF2 412 aa27.75■■■□□ 2.03
AP3S1-201ENST00000316788 ROCK1Q13464 1354 aa27.74■■■□□ 2.03
AP3S1-201ENST00000316788 ADCY10Q96PN6 1610 aa27.72■■■□□ 2.03
AP3S1-201ENST00000316788 RAPGEF6Q8TEU7 1601 aa27.71■■■□□ 2.03
AP3S1-201ENST00000316788 CCER2I3L3R5 266 aa27.7■■■□□ 2.03
AP3S1-201ENST00000316788 DDX10Q13206 875 aaKnown RBP27.7■■■□□ 2.03
AP3S1-201ENST00000316788 NUP153P49790 1475 aaKnown RBP27.7■■■□□ 2.02
AP3S1-201ENST00000316788 ABCC2Q92887 1545 aa27.68■■■□□ 2.02
AP3S1-201ENST00000316788 DENND4BO75064 1496 aaPredicted RBP27.68■■■□□ 2.02
AP3S1-201ENST00000316788 DNMT1P26358 1616 aaKnown RBP27.66■■■□□ 2.02
AP3S1-201ENST00000316788 UHRF1BP1LA0JNW5 1464 aa27.65■■■□□ 2.02
AP3S1-201ENST00000316788 DAPK1P53355 1430 aa27.64■■■□□ 2.01
AP3S1-201ENST00000316788 RRP7BPQ9NSQ0 103 aa27.61■■■□□ 2.01
AP3S1-201ENST00000316788 CDK11AQ9UQ88 783 aaPredicted RBP27.61■■■□□ 2.01
AP3S1-201ENST00000316788 KDM6BO15054 1643 aa27.6■■■□□ 2.01
AP3S1-201ENST00000316788 ABCC5O15440 1437 aa27.58■■■□□ 2.01
AP3S1-201ENST00000316788 SUPT16HQ9Y5B9 1047 aaKnown RBP27.58■■■□□ 2.01
AP3S1-201ENST00000316788 ATP10BO94823 1461 aa27.58■■■□□ 2
AP3S1-201ENST00000316788 TROQ12816 1431 aaPredicted RBP27.56■■■□□ 2
AP3S1-201ENST00000316788 ANP32CO43423 234 aa27.56■■■□□ 2
AP3S1-201ENST00000316788 CHIC2Q9UKJ5 165 aa27.55■■■□□ 2
AP3S1-201ENST00000316788 KCNH8Q96L42 1107 aa27.54■■■□□ 2
AP3S1-201ENST00000316788 MPHOSPH9Q99550 1183 aa27.53■■■□□ 2
AP3S1-201ENST00000316788 ZCCHC11Q5TAX3 1644 aaKnown RBP27.53■■■□□ 2
AP3S1-201ENST00000316788 ITSN2Q9NZM3 1697 aa27.52■■■□□ 2
AP3S1-201ENST00000316788 TRIM52Q96A61 297 aa27.5■■□□□ 1.99
AP3S1-201ENST00000316788 NPM1P06748 294 aaKnown RBP eCLIP27.49■■□□□ 1.99
AP3S1-201ENST00000316788 RPRD2Q5VT52 1461 aaKnown RBP27.47■■□□□ 1.99
AP3S1-201ENST00000316788 ANKRD30BQ9BXX2 1392 aa27.46■■□□□ 1.99
AP3S1-201ENST00000316788 ADGRL2O95490 1459 aa27.45■■□□□ 1.98
AP3S1-201ENST00000316788 HIRIP3Q9BW71 556 aaPredicted RBP27.44■■□□□ 1.98
AP3S1-201ENST00000316788 CAMSAP2Q08AD1 1489 aa27.43■■□□□ 1.98
AP3S1-201ENST00000316788 ADGBQ8N7X0 1667 aa27.42■■□□□ 1.98
AP3S1-201ENST00000316788 GPATCH8Q9UKJ3 1502 aaKnown RBP27.41■■□□□ 1.98
AP3S1-201ENST00000316788 ASXL2Q76L83 1435 aa27.41■■□□□ 1.98
AP3S1-201ENST00000316788 TEX14Q8IWB6 1497 aa27.39■■□□□ 1.98
AP3S1-201ENST00000316788 CROCC2H7BZ55 1655 aa27.37■■□□□ 1.97
AP3S1-201ENST00000316788 EIF4G2P78344 907 aaKnown RBP eCLIP27.37■■□□□ 1.97
AP3S1-201ENST00000316788 HSPA5P11021 654 aaKnown RBP27.36■■□□□ 1.97
AP3S1-201ENST00000316788 NCOA1Q15788 1441 aa27.35■■□□□ 1.97
AP3S1-201ENST00000316788 PLEKHD1A6NEE1 506 aa27.34■■□□□ 1.97
AP3S1-201ENST00000316788 L3MBTL2Q969R5 705 aa27.34■■□□□ 1.97
AP3S1-201ENST00000316788 ZNF644Q9H582 1327 aaPredicted RBP27.34■■□□□ 1.97
AP3S1-201ENST00000316788 PZPP20742 1482 aa27.33■■□□□ 1.97
AP3S1-201ENST00000316788 KIF14Q15058 1648 aa27.32■■□□□ 1.96
AP3S1-201ENST00000316788 WDR7Q9Y4E6 1490 aa27.32■■□□□ 1.96
AP3S1-201ENST00000316788 CFDP1Q9UEE9 299 aaPredicted RBP27.32■■□□□ 1.96
AP3S1-201ENST00000316788 WASHC2AQ641Q2 1341 aa27.31■■□□□ 1.96
AP3S1-201ENST00000316788 SHANK2Q9UPX8 1470 aa27.31■■□□□ 1.96
AP3S1-201ENST00000316788 CNTLNQ9NXG0 1405 aa27.28■■□□□ 1.96
AP3S1-201ENST00000316788 ABCC10Q5T3U5 1492 aa27.27■■□□□ 1.96
AP3S1-201ENST00000316788 SLC4A1APQ9BWU0 796 aaKnown RBP27.26■■□□□ 1.95
AP3S1-201ENST00000316788 ANKRD30AQ9BXX3 1397 aa27.26■■□□□ 1.95
AP3S1-201ENST00000316788 KIAA1107Q9UPP5 1409 aa27.23■■□□□ 1.95
AP3S1-201ENST00000316788 MBD5Q9P267 1494 aa27.22■■□□□ 1.95
AP3S1-201ENST00000316788 SPATA31E1Q6ZUB1 1445 aa27.22■■□□□ 1.95
AP3S1-201ENST00000316788 CCDC7Q96M83 1385 aa27.22■■□□□ 1.95
AP3S1-201ENST00000316788 FOXD1Q16676 465 aa27.19■■□□□ 1.94
AP3S1-201ENST00000316788 FAM69CQ0P6D2 419 aa27.19■■□□□ 1.94
AP3S1-201ENST00000316788 POLR1AO95602 1720 aaPredicted RBP27.18■■□□□ 1.94
AP3S1-201ENST00000316788 CDC42BPAQ5VT25 1732 aa27.18■■□□□ 1.94
AP3S1-201ENST00000316788 DIP2BQ9P265 1576 aa27.18■■□□□ 1.94
AP3S1-201ENST00000316788 KDM5DQ9BY66 1539 aa27.18■■□□□ 1.94
AP3S1-201ENST00000316788 MYT1Q01538 1121 aa27.18■■□□□ 1.94
AP3S1-201ENST00000316788 NBPF8Q3BBV2 869 aa27.16■■□□□ 1.94
AP3S1-201ENST00000316788 ARHGEF5Q12774 1597 aa27.15■■□□□ 1.94
AP3S1-201ENST00000316788 ANKRD50Q9ULJ7 1429 aa27.15■■□□□ 1.94
AP3S1-201ENST00000316788 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.15■■□□□ 1.94
AP3S1-201ENST00000316788 TRHP20396 242 aaPredicted RBP27.14■■□□□ 1.94
AP3S1-201ENST00000316788 NEFLP07196 543 aa27.13■■□□□ 1.93
AP3S1-201ENST00000316788 TTC37Q6PGP7 1564 aa27.13■■□□□ 1.93
AP3S1-201ENST00000316788 KIF13AQ9H1H9 1805 aa27.12■■□□□ 1.93
AP3S1-201ENST00000316788 C9orf84Q5VXU9 1444 aa27.11■■□□□ 1.93
AP3S1-201ENST00000316788 FKBP8Q14318 412 aa27.1■■□□□ 1.93
AP3S1-201ENST00000316788 GLI2P10070 1586 aa27.08■■□□□ 1.92
AP3S1-201ENST00000316788 ABCA9Q8IUA7 1624 aa27.07■■□□□ 1.92
AP3S1-201ENST00000316788 UHRF1BP1Q6BDS2 1440 aa27.07■■□□□ 1.92
AP3S1-201ENST00000316788 ARHGEF12Q9NZN5 1544 aa27.06■■□□□ 1.92
AP3S1-201ENST00000316788 ZNF777Q9ULD5 760 aaPredicted RBP27.05■■□□□ 1.92
AP3S1-201ENST00000316788 C11orf95C9JLR9 678 aaPredicted RBP27.04■■□□□ 1.92
AP3S1-201ENST00000316788 ARID4BQ4LE39 1312 aaPredicted RBP27.03■■□□□ 1.92
AP3S1-201ENST00000316788 TSHZ2Q9NRE2 1034 aa27.03■■□□□ 1.92
AP3S1-201ENST00000316788 CD109Q6YHK3 1445 aa27.03■■□□□ 1.92
AP3S1-201ENST00000316788 PRKRIP1Q9H875 184 aaPredicted RBP27.02■■□□□ 1.92
AP3S1-201ENST00000316788 PKD2Q13563 968 aa27.02■■□□□ 1.92
AP3S1-201ENST00000316788 MAP3K4Q9Y6R4 1608 aa27.01■■□□□ 1.91
AP3S1-201ENST00000316788 KIF7Q2M1P5 1343 aa27.01■■□□□ 1.91
AP3S1-201ENST00000316788 PREX2Q70Z35 1606 aa27■■□□□ 1.91
AP3S1-201ENST00000316788 RALGAPBQ86X10 1494 aa26.99■■□□□ 1.91
AP3S1-201ENST00000316788 RSPH4AQ5TD94 716 aa26.99■■□□□ 1.91
AP3S1-201ENST00000316788 TSPOAP1O95153 1857 aa26.98■■□□□ 1.91
AP3S1-201ENST00000316788 CCDC141Q6ZP82 1450 aa26.97■■□□□ 1.91
AP3S1-201ENST00000316788 TSPY4P0CV99 314 aa26.97■■□□□ 1.91
AP3S1-201ENST00000316788 TSPY10P0CW01 314 aa26.97■■□□□ 1.91
AP3S1-201ENST00000316788 HNRNPUQ00839 825 aaKnown RBP eCLIP26.97■■□□□ 1.91
AP3S1-201ENST00000316788 PLCH2O75038 1416 aa26.96■■□□□ 1.91
AP3S1-201ENST00000316788 KDM5CP41229 1560 aa26.96■■□□□ 1.91
AP3S1-201ENST00000316788 MAST1Q9Y2H9 1570 aa26.95■■□□□ 1.9
AP3S1-201ENST00000316788 NUP155O75694 1391 aa26.95■■□□□ 1.9
AP3S1-201ENST00000316788 KIF15Q9NS87 1388 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms