RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 NEUROD2Q15784 382 aa8.22□□□□□ -1.09
SMCO3-201ENST00000316048 ZMYND10O75800 440 aa8.21□□□□□ -1.09
SMCO3-201ENST00000316048 EMILIN3Q9NT22 766 aa8.21□□□□□ -1.09
SMCO3-201ENST00000316048 GPHNQ9NQX3 736 aaPredicted RBP8.21□□□□□ -1.1
SMCO3-201ENST00000316048 DPYSL4O14531 572 aa8.2□□□□□ -1.1
SMCO3-201ENST00000316048 DSG2Q14126 1118 aa8.2□□□□□ -1.1
SMCO3-201ENST00000316048 EVX2Q03828 476 aa8.18□□□□□ -1.1
SMCO3-201ENST00000316048 PDCD7Q8N8D1 485 aaKnown RBP8.18□□□□□ -1.1
SMCO3-201ENST00000316048 MICALL2Q8IY33 904 aa8.18□□□□□ -1.1
SMCO3-201ENST00000316048 SMYD5Q6GMV2 418 aa8.17□□□□□ -1.1
SMCO3-201ENST00000316048 ATN1P54259 1190 aaPredicted RBP8.15□□□□□ -1.1
SMCO3-201ENST00000316048 BARGINQ6ZT62 677 aa8.15□□□□□ -1.1
SMCO3-201ENST00000316048 GPIHBP1Q8IV16 184 aa8.15□□□□□ -1.11
SMCO3-201ENST00000316048 GPBP1L1Q9HC44 474 aaPredicted RBP8.13□□□□□ -1.11
SMCO3-201ENST00000316048 PDIA6Q15084 440 aa8.12□□□□□ -1.11
SMCO3-201ENST00000316048 C2orf72A6NCS6 295 aa8.11□□□□□ -1.11
SMCO3-201ENST00000316048 IRX5P78411 483 aaPredicted RBP8.11□□□□□ -1.11
SMCO3-201ENST00000316048 FOXK1P85037 733 aa8.11□□□□□ -1.11
SMCO3-201ENST00000316048 TMC2Q8TDI7 906 aa8.11□□□□□ -1.11
SMCO3-201ENST00000316048 C14orf37Q86TY3 774 aa8.1□□□□□ -1.11
SMCO3-201ENST00000316048 HAX1O00165 279 aa8.09□□□□□ -1.11
SMCO3-201ENST00000316048 PLPP6Q8IY26 295 aa8.09□□□□□ -1.11
SMCO3-201ENST00000316048 ATMINO43313 823 aaPredicted RBP8.09□□□□□ -1.11
SMCO3-201ENST00000316048 KIF3CO14782 793 aa8.08□□□□□ -1.12
SMCO3-201ENST00000316048 GPR37O15354 613 aa8.08□□□□□ -1.12
SMCO3-201ENST00000316048 TMEM121BQ9BXQ6 578 aaPredicted RBP8.08□□□□□ -1.12
SMCO3-201ENST00000316048 BOLA1Q9Y3E2 137 aa8.08□□□□□ -1.12
SMCO3-201ENST00000316048 TMEM92Q6UXU6 159 aa8.07□□□□□ -1.12
SMCO3-201ENST00000316048 KRI1Q8N9T8 703 aaKnown RBP8.07□□□□□ -1.12
SMCO3-201ENST00000316048 AK7Q96M32 723 aa8.06□□□□□ -1.12
SMCO3-201ENST00000316048 ASTLQ6HA08 431 aaPredicted RBP8.06□□□□□ -1.12
SMCO3-201ENST00000316048 UPF1Q92900 1129 aaKnown RBP eCLIP8.06□□□□□ -1.12
SMCO3-201ENST00000316048 OCEL1Q9H607 264 aa8.06□□□□□ -1.12
SMCO3-201ENST00000316048 GRXCR2A6NFK2 248 aa8.05□□□□□ -1.12
SMCO3-201ENST00000316048 SPDYE16A6NNV3 312 aaPredicted RBP8.05□□□□□ -1.12
SMCO3-201ENST00000316048 TRIM66O15016 1216 aa8.03□□□□□ -1.12
SMCO3-201ENST00000316048 KDM4CQ9H3R0 1056 aa8.03□□□□□ -1.12
SMCO3-201ENST00000316048 IL27Q8NEV9 243 aa8.02□□□□□ -1.13
SMCO3-201ENST00000316048 PELP1Q8IZL8 1130 aaKnown RBP8.02□□□□□ -1.13
SMCO3-201ENST00000316048 COLQQ9Y215 455 aaPredicted RBP8.02□□□□□ -1.13
SMCO3-201ENST00000316048 MAP3K9P80192 1104 aa8.01□□□□□ -1.13
SMCO3-201ENST00000316048 PDE4DQ08499 809 aa8.01□□□□□ -1.13
SMCO3-201ENST00000316048 PLCG2P16885 1265 aa8□□□□□ -1.13
SMCO3-201ENST00000316048 PRIM1P49642 420 aaKnown RBP8□□□□□ -1.13
SMCO3-201ENST00000316048 IER5LQ5T953 404 aa8□□□□□ -1.13
SMCO3-201ENST00000316048 DDX12PQ92771 950 aa8□□□□□ -1.13
SMCO3-201ENST00000316048 NUTM2FA1L443 756 aa7.99□□□□□ -1.13
SMCO3-201ENST00000316048 G3V3G9 751 aa7.99□□□□□ -1.13
SMCO3-201ENST00000316048 OSBPP22059 807 aa7.99□□□□□ -1.13
SMCO3-201ENST00000316048 ERICH6Q7L0X2 663 aa7.99□□□□□ -1.13
SMCO3-201ENST00000316048 FECHP22830 423 aa7.99□□□□□ -1.13
SMCO3-201ENST00000316048 OXER1Q8TDS5 423 aa7.97□□□□□ -1.13
SMCO3-201ENST00000316048 CCDC102AQ96A19 550 aa7.97□□□□□ -1.13
SMCO3-201ENST00000316048 POTEFA5A3E0 1075 aa7.96□□□□□ -1.13
SMCO3-201ENST00000316048 GABBR2O75899 941 aa7.95□□□□□ -1.14
SMCO3-201ENST00000316048 FAM117AQ9C073 453 aa7.95□□□□□ -1.14
SMCO3-201ENST00000316048 SUPT5HO00267 1087 aaKnown RBP7.94□□□□□ -1.14
SMCO3-201ENST00000316048 CLCN6P51797 869 aa7.94□□□□□ -1.14
SMCO3-201ENST00000316048 SEC24BO95487 1268 aa7.93□□□□□ -1.14
SMCO3-201ENST00000316048 MAP2K5Q13163 448 aa7.93□□□□□ -1.14
SMCO3-201ENST00000316048 L3MBTL3Q96JM7 780 aaPredicted RBP7.93□□□□□ -1.14
SMCO3-201ENST00000316048 EVI5O60447 810 aa7.93□□□□□ -1.14
SMCO3-201ENST00000316048 IRF6O14896 467 aa7.92□□□□□ -1.14
SMCO3-201ENST00000316048 MINK1Q8N4C8 1332 aaPredicted RBP7.92□□□□□ -1.14
SMCO3-201ENST00000316048 GNPATO15228 680 aa7.91□□□□□ -1.14
SMCO3-201ENST00000316048 PTGER2P43116 358 aa7.91□□□□□ -1.14
SMCO3-201ENST00000316048 PARP9Q8IXQ6 854 aa7.91□□□□□ -1.14
SMCO3-201ENST00000316048 PLEKHG3A1L390 1219 aa7.91□□□□□ -1.14
SMCO3-201ENST00000316048 CDHR5Q9HBB8 845 aa7.9□□□□□ -1.14
SMCO3-201ENST00000316048 FCHSD2O94868 740 aa7.88□□□□□ -1.15
SMCO3-201ENST00000316048 PTGDRQ13258 359 aa7.88□□□□□ -1.15
SMCO3-201ENST00000316048 HIC1Q14526 733 aa7.88□□□□□ -1.15
SMCO3-201ENST00000316048 DCBLD2Q96PD2 775 aa7.88□□□□□ -1.15
SMCO3-201ENST00000316048 ZNF316A6NFI3 1004 aaPredicted RBP7.88□□□□□ -1.15
SMCO3-201ENST00000316048 AMHR2Q16671 573 aa7.88□□□□□ -1.15
SMCO3-201ENST00000316048 TBC1D12O60347 775 aa7.87□□□□□ -1.15
SMCO3-201ENST00000316048 ARXQ96QS3 562 aa7.87□□□□□ -1.15
SMCO3-201ENST00000316048 PTCD2Q8WV60 388 aaKnown RBP7.87□□□□□ -1.15
SMCO3-201ENST00000316048 METRNQ9UJH8 293 aa7.87□□□□□ -1.15
SMCO3-201ENST00000316048 POTEIP0CG38 1075 aa7.85□□□□□ -1.15
SMCO3-201ENST00000316048 REPIN1Q9BWE0 567 aaKnown RBP7.85□□□□□ -1.15
SMCO3-201ENST00000316048 TTLL12Q14166 644 aaPredicted RBP7.85□□□□□ -1.15
SMCO3-201ENST00000316048 C3orf67Q6ZVT6 689 aa7.85□□□□□ -1.15
SMCO3-201ENST00000316048 SLC39A7Q92504 469 aa7.85□□□□□ -1.15
SMCO3-201ENST00000316048 NPDC1Q9NQX5 325 aaPredicted RBP7.84□□□□□ -1.16
SMCO3-201ENST00000316048 TSR1Q2NL82 804 aaKnown RBP7.83□□□□□ -1.16
SMCO3-201ENST00000316048 RBM33Q96EV2 1170 aaKnown RBP7.83□□□□□ -1.16
SMCO3-201ENST00000316048 MS4A1P11836 297 aa7.82□□□□□ -1.16
SMCO3-201ENST00000316048 EN1Q05925 392 aaPredicted RBP7.82□□□□□ -1.16
SMCO3-201ENST00000316048 GIGYF2Q6Y7W6 1299 aaKnown RBP7.82□□□□□ -1.16
SMCO3-201ENST00000316048 ANO8Q9HCE9 1232 aaPredicted RBP7.82□□□□□ -1.16
SMCO3-201ENST00000316048 C7P10643 843 aa7.81□□□□□ -1.16
SMCO3-201ENST00000316048 DDRGK1Q96HY6 314 aa7.81□□□□□ -1.16
SMCO3-201ENST00000316048 PHOX2BQ99453 314 aa7.81□□□□□ -1.16
SMCO3-201ENST00000316048 MAP3K7O43318 606 aa7.81□□□□□ -1.16
SMCO3-201ENST00000316048 PCDHGA10Q9Y5H3 936 aa7.81□□□□□ -1.16
SMCO3-201ENST00000316048 SLC34A2O95436 690 aa7.8□□□□□ -1.16
SMCO3-201ENST00000316048 FAM161AQ3B820 660 aa7.8□□□□□ -1.16
SMCO3-201ENST00000316048 DAXXQ9UER7 740 aaPredicted RBP7.79□□□□□ -1.16
SMCO3-201ENST00000316048 NLRP7Q8WX94 980 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms