RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 CDC42BPAQ5VT25 1732 aa32.83■■■□□ 2.85
PDLIM2-202ENST00000308354 ZNF316A6NFI3 1004 aaPredicted RBP32.82■■■□□ 2.84
PDLIM2-202ENST00000308354 DIEXFQ68CQ4 756 aaKnown RBP32.79■■■□□ 2.84
PDLIM2-202ENST00000308354 SIN3AQ96ST3 1273 aa32.79■■■□□ 2.84
PDLIM2-202ENST00000308354 KCNH8Q96L42 1107 aa32.77■■■□□ 2.84
PDLIM2-202ENST00000308354 KDM6BO15054 1643 aa32.77■■■□□ 2.84
PDLIM2-202ENST00000308354 AKNAQ7Z591 1439 aa32.77■■■□□ 2.84
PDLIM2-202ENST00000308354 GCC2Q8IWJ2 1684 aa32.77■■■□□ 2.84
PDLIM2-202ENST00000308354 NEUROD1Q13562 356 aa32.75■■■□□ 2.83
PDLIM2-202ENST00000308354 UHRF1BP1LA0JNW5 1464 aa32.75■■■□□ 2.83
PDLIM2-202ENST00000308354 ZCCHC11Q5TAX3 1644 aaKnown RBP32.73■■■□□ 2.83
PDLIM2-202ENST00000308354 ROCK1Q13464 1354 aa32.72■■■□□ 2.83
PDLIM2-202ENST00000308354 TRIM52Q96A61 297 aa32.7■■■□□ 2.83
PDLIM2-202ENST00000308354 KDM5BQ9UGL1 1544 aa32.7■■■□□ 2.82
PDLIM2-202ENST00000308354 TTC37Q6PGP7 1564 aa32.67■■■□□ 2.82
PDLIM2-202ENST00000308354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.66■■■□□ 2.82
PDLIM2-202ENST00000308354 HNRNPMP52272 730 aaKnown RBP eCLIP32.65■■■□□ 2.82
PDLIM2-202ENST00000308354 CDC42BPBQ9Y5S2 1711 aa32.63■■■□□ 2.81
PDLIM2-202ENST00000308354 PREX2Q70Z35 1606 aa32.61■■■□□ 2.81
PDLIM2-202ENST00000308354 NCOA1Q15788 1441 aa32.6■■■□□ 2.81
PDLIM2-202ENST00000308354 CROCC2H7BZ55 1655 aa32.59■■■□□ 2.81
PDLIM2-202ENST00000308354 SAMD9LQ8IVG5 1584 aa32.57■■■□□ 2.8
PDLIM2-202ENST00000308354 ARHGAP5Q13017 1502 aa32.56■■■□□ 2.8
PDLIM2-202ENST00000308354 ADGBQ8N7X0 1667 aa32.54■■■□□ 2.8
PDLIM2-202ENST00000308354 DENND4BO75064 1496 aaPredicted RBP32.53■■■□□ 2.8
PDLIM2-202ENST00000308354 MBD5Q9P267 1494 aa32.53■■■□□ 2.8
PDLIM2-202ENST00000308354 TSPY4P0CV99 314 aa32.53■■■□□ 2.8
PDLIM2-202ENST00000308354 TSPY10P0CW01 314 aa32.53■■■□□ 2.8
PDLIM2-202ENST00000308354 MPHOSPH9Q99550 1183 aa32.53■■■□□ 2.8
PDLIM2-202ENST00000308354 ANKRD30AQ9BXX3 1397 aa32.52■■■□□ 2.8
PDLIM2-202ENST00000308354 ADGRL2O95490 1459 aa32.52■■■□□ 2.8
PDLIM2-202ENST00000308354 C9orf84Q5VXU9 1444 aa32.52■■■□□ 2.8
PDLIM2-202ENST00000308354 MYO5CQ9NQX4 1742 aa32.49■■■□□ 2.79
PDLIM2-202ENST00000308354 FOXD1Q16676 465 aa32.47■■■□□ 2.79
PDLIM2-202ENST00000308354 SHANK2Q9UPX8 1470 aa32.46■■■□□ 2.79
PDLIM2-202ENST00000308354 SYCP2Q9BX26 1530 aa32.45■■■□□ 2.79
PDLIM2-202ENST00000308354 ARHGEF5Q12774 1597 aa32.45■■■□□ 2.79
PDLIM2-202ENST00000308354 PLCH2O75038 1416 aa32.43■■■□□ 2.78
PDLIM2-202ENST00000308354 CCDC141Q6ZP82 1450 aa32.43■■■□□ 2.78
PDLIM2-202ENST00000308354 WDR7Q9Y4E6 1490 aa32.42■■■□□ 2.78
PDLIM2-202ENST00000308354 TIMELESSQ9UNS1 1208 aa32.41■■■□□ 2.78
PDLIM2-202ENST00000308354 ANKRD50Q9ULJ7 1429 aa32.41■■■□□ 2.78
PDLIM2-202ENST00000308354 SLC4A1APQ9BWU0 796 aaKnown RBP32.39■■■□□ 2.78
PDLIM2-202ENST00000308354 TONSLQ96HA7 1378 aa32.39■■■□□ 2.78
PDLIM2-202ENST00000308354 RSPH4AQ5TD94 716 aa32.37■■■□□ 2.77
PDLIM2-202ENST00000308354 EFCAB2Q5VUJ9 269 aa32.37■■■□□ 2.77
PDLIM2-202ENST00000308354 ASXL2Q76L83 1435 aa32.36■■■□□ 2.77
PDLIM2-202ENST00000308354 KIF15Q9NS87 1388 aa32.36■■■□□ 2.77
PDLIM2-202ENST00000308354 ARHGEF12Q9NZN5 1544 aa32.34■■■□□ 2.77
PDLIM2-202ENST00000308354 PPP1R15AO75807 674 aaPredicted RBP32.34■■■□□ 2.77
PDLIM2-202ENST00000308354 ACIN1Q9UKV3 1341 aaKnown RBP32.34■■■□□ 2.77
PDLIM2-202ENST00000308354 NPM1P06748 294 aaKnown RBP eCLIP32.33■■■□□ 2.77
PDLIM2-202ENST00000308354 KIAA1107Q9UPP5 1409 aa32.32■■■□□ 2.76
PDLIM2-202ENST00000308354 PZPP20742 1482 aa32.31■■■□□ 2.76
PDLIM2-202ENST00000308354 PLEKHH2Q8IVE3 1493 aa32.3■■■□□ 2.76
PDLIM2-202ENST00000308354 ANKRD30BQ9BXX2 1392 aa32.24■■■□□ 2.75
PDLIM2-202ENST00000308354 NUP155O75694 1391 aa32.23■■■□□ 2.75
PDLIM2-202ENST00000308354 ABCC1P33527 1531 aa32.22■■■□□ 2.75
PDLIM2-202ENST00000308354 TRAPPC8Q9Y2L5 1435 aa32.22■■■□□ 2.75
PDLIM2-202ENST00000308354 ABCA9Q8IUA7 1624 aa32.2■■■□□ 2.75
PDLIM2-202ENST00000308354 PKD2Q13563 968 aa32.19■■■□□ 2.74
PDLIM2-202ENST00000308354 MAST1Q9Y2H9 1570 aa32.19■■■□□ 2.74
PDLIM2-202ENST00000308354 MIER1Q8N108 512 aa32.19■■■□□ 2.74
PDLIM2-202ENST00000308354 AFAP1Q8N556 730 aa32.17■■■□□ 2.74
PDLIM2-202ENST00000308354 FANCAO15360 1455 aa32.17■■■□□ 2.74
PDLIM2-202ENST00000308354 ARAP3Q8WWN8 1544 aa32.17■■■□□ 2.74
PDLIM2-202ENST00000308354 CYB5RLQ6IPT4 315 aa32.16■■■□□ 2.74
PDLIM2-202ENST00000308354 L3MBTL2Q969R5 705 aa32.11■■■□□ 2.73
PDLIM2-202ENST00000308354 RPRD2Q5VT52 1461 aaKnown RBP32.09■■■□□ 2.73
PDLIM2-202ENST00000308354 PLXNC1O60486 1568 aa32.09■■■□□ 2.73
PDLIM2-202ENST00000308354 HIRIP3Q9BW71 556 aaPredicted RBP32.08■■■□□ 2.73
PDLIM2-202ENST00000308354 SPAG9O60271 1321 aaKnown RBP32.08■■■□□ 2.73
PDLIM2-202ENST00000308354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.07■■■□□ 2.72
PDLIM2-202ENST00000308354 KDM5DQ9BY66 1539 aa32.05■■■□□ 2.72
PDLIM2-202ENST00000308354 ADGRL1O94910 1474 aa32.04■■■□□ 2.72
PDLIM2-202ENST00000308354 SCAPERQ9BY12 1400 aa32.03■■■□□ 2.72
PDLIM2-202ENST00000308354 RIMBP3CA6NJZ7 1639 aa32.02■■■□□ 2.72
PDLIM2-202ENST00000308354 RIMBP3BA6NNM3 1639 aa32.02■■■□□ 2.72
PDLIM2-202ENST00000308354 RIMBP3Q9UFD9 1639 aa32.02■■■□□ 2.72
PDLIM2-202ENST00000308354 DUOX2Q9NRD8 1548 aa32.01■■■□□ 2.72
PDLIM2-202ENST00000308354 CD109Q6YHK3 1445 aa32■■■□□ 2.71
PDLIM2-202ENST00000308354 FAM135AQ9P2D6 1515 aa31.98■■■□□ 2.71
PDLIM2-202ENST00000308354 MYT1LQ9UL68 1186 aa31.98■■■□□ 2.71
PDLIM2-202ENST00000308354 ZFYVE16Q7Z3T8 1539 aa31.97■■■□□ 2.71
PDLIM2-202ENST00000308354 TEX14Q8IWB6 1497 aa31.96■■■□□ 2.71
PDLIM2-202ENST00000308354 RTEL1-TNFRSF6BF6WH68 1400 aa31.94■■■□□ 2.7
PDLIM2-202ENST00000308354 ERBINQ96RT1 1412 aa31.94■■■□□ 2.7
PDLIM2-202ENST00000308354 UNC13BO14795 1591 aa31.93■■■□□ 2.7
PDLIM2-202ENST00000308354 CENPBP07199 599 aaPredicted RBP31.92■■■□□ 2.7
PDLIM2-202ENST00000308354 NBPF8Q3BBV2 869 aa31.89■■■□□ 2.7
PDLIM2-202ENST00000308354 ATP7AQ04656 1500 aa31.88■■■□□ 2.69
PDLIM2-202ENST00000308354 SCAF1Q9H7N4 1312 aaKnown RBP31.88■■■□□ 2.69
PDLIM2-202ENST00000308354 YTHDC1Q96MU7 727 aaKnown RBP31.88■■■□□ 2.69
PDLIM2-202ENST00000308354 INO80Q9ULG1 1556 aaPredicted RBP31.85■■■□□ 2.69
PDLIM2-202ENST00000308354 IQGAP3Q86VI3 1631 aa31.81■■■□□ 2.68
PDLIM2-202ENST00000308354 MAGI2Q86UL8 1455 aa31.81■■■□□ 2.68
PDLIM2-202ENST00000308354 DDX10Q13206 875 aaKnown RBP31.8■■■□□ 2.68
PDLIM2-202ENST00000308354 ZNF518AQ6AHZ1 1483 aa31.79■■■□□ 2.68
PDLIM2-202ENST00000308354 ZNF326Q5BKZ1 582 aaKnown RBP31.78■■■□□ 2.68
PDLIM2-202ENST00000308354 HSPA5P11021 654 aaKnown RBP31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms