RNA–Protein interactions for RNA: ENST00000298552.7

TSC1-201, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-201ENST00000298552 DCAF8L1A6NGE4 600 aa9.37□□□□□ -0.91
TSC1-201ENST00000298552 PPP1R15AO75807 674 aaPredicted RBP9.37□□□□□ -0.91
TSC1-201ENST00000298552 E9PSI1 815 aa9.35□□□□□ -0.91
TSC1-201ENST00000298552 RASSF8Q8NHQ8 419 aa9.35□□□□□ -0.91
TSC1-201ENST00000298552 CCDC173Q0VFZ6 552 aa9.35□□□□□ -0.91
TSC1-201ENST00000298552 ANKRD20A12PQ8NF67 263 aa9.35□□□□□ -0.91
TSC1-201ENST00000298552 HNRNPUQ00839 825 aaKnown RBP eCLIP9.35□□□□□ -0.91
TSC1-201ENST00000298552 NUDCQ9Y266 331 aa9.35□□□□□ -0.91
TSC1-201ENST00000298552 CLGNO14967 610 aa9.35□□□□□ -0.91
TSC1-201ENST00000298552 ODF2Q5BJF6 829 aa9.35□□□□□ -0.91
TSC1-201ENST00000298552 MAP7D2Q96T17 732 aa9.35□□□□□ -0.91
TSC1-201ENST00000298552 AMER1Q5JTC6 1135 aaPredicted RBP9.34□□□□□ -0.91
TSC1-201ENST00000298552 MAPK8IP3Q9UPT6 1336 aa9.33□□□□□ -0.92
TSC1-201ENST00000298552 RUFY1Q96T51 708 aa9.33□□□□□ -0.92
TSC1-201ENST00000298552 EZRP15311 586 aaKnown RBP9.33□□□□□ -0.92
TSC1-201ENST00000298552 GOLGA6L7A0A1B0GV03 622 aa9.33□□□□□ -0.92
TSC1-201ENST00000298552 CCDC47Q96A33 483 aaKnown RBP9.33□□□□□ -0.92
TSC1-201ENST00000298552 CHMP3Q9Y3E7 222 aa9.33□□□□□ -0.92
TSC1-201ENST00000298552 CWC15Q9P013 229 aaKnown RBP9.32□□□□□ -0.92
TSC1-201ENST00000298552 SUPT16HQ9Y5B9 1047 aaKnown RBP9.32□□□□□ -0.92
TSC1-201ENST00000298552 ARGLU1Q9NWB6 273 aaPredicted RBP9.32□□□□□ -0.92
TSC1-201ENST00000298552 WWC2Q6AWC2 1192 aa9.32□□□□□ -0.92
TSC1-201ENST00000298552 HOOK1Q9UJC3 728 aaKnown RBP9.32□□□□□ -0.92
TSC1-201ENST00000298552 MNS1Q8NEH6 495 aa9.32□□□□□ -0.92
TSC1-201ENST00000298552 DEF6Q9H4E7 631 aa9.32□□□□□ -0.92
TSC1-201ENST00000298552 G3V3G9 751 aa9.32□□□□□ -0.92
TSC1-201ENST00000298552 DCAF8Q5TAQ9 597 aa9.32□□□□□ -0.92
TSC1-201ENST00000298552 PABPN1Q86U42 306 aaKnown RBP eCLIP9.32□□□□□ -0.92
TSC1-201ENST00000298552 R3HCC1Q9Y3T6 440 aaKnown RBP9.31□□□□□ -0.92
TSC1-201ENST00000298552 AEBP2Q6ZN18 517 aaPredicted RBP9.31□□□□□ -0.92
TSC1-201ENST00000298552 LRRFIP1Q32MZ4 808 aaKnown RBP9.31□□□□□ -0.92
TSC1-201ENST00000298552 MARCH6O60337 910 aa9.3□□□□□ -0.92
TSC1-201ENST00000298552 NF2P35240 595 aa9.3□□□□□ -0.92
TSC1-201ENST00000298552 WWC1Q8IX03 1113 aa9.3□□□□□ -0.92
TSC1-201ENST00000298552 TPD52L1Q16890 204 aaPredicted RBP9.3□□□□□ -0.92
TSC1-201ENST00000298552 HDGFP51858 240 aaKnown RBP9.29□□□□□ -0.92
TSC1-201ENST00000298552 CFAP57Q96MR6 1250 aa9.29□□□□□ -0.92
TSC1-201ENST00000298552 TSPYL1Q9H0U9 437 aa9.29□□□□□ -0.92
TSC1-201ENST00000298552 AMOTL1Q8IY63 956 aa9.28□□□□□ -0.92
TSC1-201ENST00000298552 PPM1EQ8WY54 764 aa9.28□□□□□ -0.92
TSC1-201ENST00000298552 BCCIPQ9P287 314 aaKnown RBP eCLIP9.28□□□□□ -0.92
TSC1-201ENST00000298552 FBLN2P98095 1184 aa9.28□□□□□ -0.92
TSC1-201ENST00000298552 DYDC1Q8WWB3 177 aa9.28□□□□□ -0.92
TSC1-201ENST00000298552 KIF3BO15066 747 aa9.28□□□□□ -0.92
TSC1-201ENST00000298552 CTDP1Q9Y5B0 961 aaPredicted RBP9.28□□□□□ -0.92
TSC1-201ENST00000298552 CT47A1Q5JQC4 288 aaPredicted RBP9.27□□□□□ -0.92
TSC1-201ENST00000298552 DNAI2Q9GZS0 605 aa9.27□□□□□ -0.93
TSC1-201ENST00000298552 FYB1O15117 783 aa9.27□□□□□ -0.93
TSC1-201ENST00000298552 CCDC175P0C221 793 aa9.27□□□□□ -0.93
TSC1-201ENST00000298552 TRIM21P19474 475 aaKnown RBP9.27□□□□□ -0.93
TSC1-201ENST00000298552 KIF16BQ96L93 1317 aa9.27□□□□□ -0.93
TSC1-201ENST00000298552 ZBTB7CA1YPR0 619 aa9.26□□□□□ -0.93
TSC1-201ENST00000298552 FOXD1Q16676 465 aa9.26□□□□□ -0.93
TSC1-201ENST00000298552 ERCC4Q92889 916 aaPredicted RBP9.26□□□□□ -0.93
TSC1-201ENST00000298552 ATP6V1DQ9Y5K8 247 aa9.26□□□□□ -0.93
TSC1-201ENST00000298552 CREBRFQ8IUR6 639 aa9.26□□□□□ -0.93
TSC1-201ENST00000298552 SPATA24Q86W54 205 aa9.26□□□□□ -0.93
TSC1-201ENST00000298552 DESP17661 470 aa9.26□□□□□ -0.93
TSC1-201ENST00000298552 CCDC43Q96MW1 224 aaKnown RBP9.26□□□□□ -0.93
TSC1-201ENST00000298552 WASHC2AQ641Q2 1341 aa9.25□□□□□ -0.93
TSC1-201ENST00000298552 GRIPAP1Q4V328 841 aa9.25□□□□□ -0.93
TSC1-201ENST00000298552 PATL2C9JE40 543 aaKnown RBP9.25□□□□□ -0.93
TSC1-201ENST00000298552 VPS53Q5VIR6 699 aa9.25□□□□□ -0.93
TSC1-201ENST00000298552 HSP90B2PQ58FF3 399 aa9.25□□□□□ -0.93
TSC1-201ENST00000298552 PAF1Q8N7H5 531 aa9.25□□□□□ -0.93
TSC1-201ENST00000298552 FAM9BQ8IZU0 186 aa9.23□□□□□ -0.93
TSC1-201ENST00000298552 TXLNBQ8N3L3 684 aa9.23□□□□□ -0.93
TSC1-201ENST00000298552 TRIM34Q9BYJ4 488 aa9.23□□□□□ -0.93
TSC1-201ENST00000298552 CWC22Q9HCG8 908 aaKnown RBP9.23□□□□□ -0.93
TSC1-201ENST00000298552 KNSTRNQ9Y448 316 aa9.22□□□□□ -0.93
TSC1-201ENST00000298552 ERLIN2O94905 339 aa9.22□□□□□ -0.93
TSC1-201ENST00000298552 USP8P40818 1118 aa9.22□□□□□ -0.93
TSC1-201ENST00000298552 PDE4CQ08493 712 aa9.22□□□□□ -0.93
TSC1-201ENST00000298552 AKAP17AQ02040 695 aaKnown RBP9.22□□□□□ -0.93
TSC1-201ENST00000298552 GOLGA6L19H0YKK7 550 aa9.21□□□□□ -0.93
TSC1-201ENST00000298552 CENPJQ9HC77 1338 aaPredicted RBP9.21□□□□□ -0.93
TSC1-201ENST00000298552 NOL10Q9BSC4 688 aaKnown RBP9.21□□□□□ -0.93
TSC1-201ENST00000298552 STAMBPO95630 424 aa9.21□□□□□ -0.93
TSC1-201ENST00000298552 TSPY4P0CV99 314 aa9.21□□□□□ -0.93
TSC1-201ENST00000298552 TSPY10P0CW01 314 aa9.21□□□□□ -0.93
TSC1-201ENST00000298552 ZNF777Q9ULD5 760 aaPredicted RBP9.21□□□□□ -0.94
TSC1-201ENST00000298552 IPO8O15397 1037 aaKnown RBP9.21□□□□□ -0.94
TSC1-201ENST00000298552 DHX8Q14562 1220 aaKnown RBP9.21□□□□□ -0.94
TSC1-201ENST00000298552 TPRNQ4KMQ1 711 aa9.21□□□□□ -0.94
TSC1-201ENST00000298552 PES1O00541 588 aaKnown RBP9.21□□□□□ -0.94
TSC1-201ENST00000298552 MTERF4Q7Z6M4 381 aaKnown RBP9.21□□□□□ -0.94
TSC1-201ENST00000298552 RABEP1Q15276 862 aa9.21□□□□□ -0.94
TSC1-201ENST00000298552 FBXO3Q9UK99 471 aa9.21□□□□□ -0.94
TSC1-201ENST00000298552 MRS2Q9HD23 443 aa9.2□□□□□ -0.94
TSC1-201ENST00000298552 GORABQ5T7V8 394 aa9.2□□□□□ -0.94
TSC1-201ENST00000298552 H0YHG0 523 aa9.2□□□□□ -0.94
TSC1-201ENST00000298552 SMC4Q9NTJ3 1288 aa9.2□□□□□ -0.94
TSC1-201ENST00000298552 TAOK2Q9UL54 1235 aa9.19□□□□□ -0.94
TSC1-201ENST00000298552 CPLX2Q6PUV4 134 aaKnown RBP9.19□□□□□ -0.94
TSC1-201ENST00000298552 TAF7LQ5H9L4 462 aa9.19□□□□□ -0.94
TSC1-201ENST00000298552 CCP110O43303 1012 aa9.18□□□□□ -0.94
TSC1-201ENST00000298552 TCERG1O14776 1098 aaKnown RBP9.18□□□□□ -0.94
TSC1-201ENST00000298552 HSP90AA2PQ14568 343 aaPredicted RBP9.18□□□□□ -0.94
TSC1-201ENST00000298552 SEPT7Q16181 437 aaKnown RBP9.18□□□□□ -0.94
TSC1-201ENST00000298552 IPO9Q96P70 1041 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 1611.8 ms