RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 TPM4P67936 248 aa18.79■□□□□ 0.6
UBR5-201ENST00000220959 DCAF8Q5TAQ9 597 aa18.79■□□□□ 0.6
UBR5-201ENST00000220959 B4GALNT3Q6L9W6 998 aa18.79■□□□□ 0.6
UBR5-201ENST00000220959 SAFB2Q14151 953 aaKnown RBP eCLIP18.79■□□□□ 0.6
UBR5-201ENST00000220959 DCAF11Q8TEB1 546 aa18.78■□□□□ 0.6
UBR5-201ENST00000220959 IPO8O15397 1037 aaKnown RBP18.78■□□□□ 0.6
UBR5-201ENST00000220959 GORABQ5T7V8 394 aa18.77■□□□□ 0.6
UBR5-201ENST00000220959 TAF7LQ5H9L4 462 aa18.77■□□□□ 0.59
UBR5-201ENST00000220959 A0A0U1RQG5 324 aaPredicted RBP18.76■□□□□ 0.59
UBR5-201ENST00000220959 PTMSP20962 102 aa18.76■□□□□ 0.59
UBR5-201ENST00000220959 HDGFL2Q7Z4V5 671 aaPredicted RBP18.76■□□□□ 0.59
UBR5-201ENST00000220959 GOLGA3Q08378 1498 aa18.76■□□□□ 0.59
UBR5-201ENST00000220959 CCDC34Q96HJ3 373 aa18.76■□□□□ 0.59
UBR5-201ENST00000220959 CCDC9Q9Y3X0 531 aaKnown RBP18.75■□□□□ 0.59
UBR5-201ENST00000220959 STK26Q9P289 416 aa18.74■□□□□ 0.59
UBR5-201ENST00000220959 CALD1Q05682 793 aaKnown RBP18.73■□□□□ 0.59
UBR5-201ENST00000220959 GBP4Q96PP9 640 aa18.73■□□□□ 0.59
UBR5-201ENST00000220959 CHMP3Q9Y3E7 222 aa18.73■□□□□ 0.59
UBR5-201ENST00000220959 PDE4CQ08493 712 aa18.72■□□□□ 0.59
UBR5-201ENST00000220959 GPATCH3Q96I76 525 aa18.71■□□□□ 0.59
UBR5-201ENST00000220959 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
UBR5-201ENST00000220959 CEP89Q96ST8 783 aa18.71■□□□□ 0.58
UBR5-201ENST00000220959 CHMP4AQ9BY43 222 aa18.71■□□□□ 0.58
UBR5-201ENST00000220959 HSP90B1P14625 803 aaKnown RBP18.7■□□□□ 0.58
UBR5-201ENST00000220959 SYAP1Q96A49 352 aaPredicted RBP18.7■□□□□ 0.58
UBR5-201ENST00000220959 RASSF8Q8NHQ8 419 aa18.69■□□□□ 0.58
UBR5-201ENST00000220959 SIN3AQ96ST3 1273 aa18.69■□□□□ 0.58
UBR5-201ENST00000220959 GOLGA6L1Q8N7Z2 621 aa18.68■□□□□ 0.58
UBR5-201ENST00000220959 CCNB3Q8WWL7 1395 aa18.67■□□□□ 0.58
UBR5-201ENST00000220959 CREBRFQ8IUR6 639 aa18.66■□□□□ 0.58
UBR5-201ENST00000220959 SPAG9O60271 1321 aaKnown RBP18.65■□□□□ 0.58
UBR5-201ENST00000220959 GGT6Q6P531 493 aa18.65■□□□□ 0.58
UBR5-201ENST00000220959 EEA1Q15075 1411 aa18.64■□□□□ 0.58
UBR5-201ENST00000220959 CEP162Q5TB80 1403 aa18.64■□□□□ 0.58
UBR5-201ENST00000220959 ITPRIPQ8IWB1 547 aa18.64■□□□□ 0.57
UBR5-201ENST00000220959 HDAC5Q9UQL6 1122 aa18.64■□□□□ 0.57
UBR5-201ENST00000220959 TRIM6-TRIM34B2RNG4 842 aa18.63■□□□□ 0.57
UBR5-201ENST00000220959 CSPP1Q1MSJ5 1256 aa18.63■□□□□ 0.57
UBR5-201ENST00000220959 STK31Q9BXU1 1019 aa18.63■□□□□ 0.57
UBR5-201ENST00000220959 KIF27Q86VH2 1401 aa18.63■□□□□ 0.57
UBR5-201ENST00000220959 MARCH6O60337 910 aa18.63■□□□□ 0.57
UBR5-201ENST00000220959 USP35Q9P2H5 1018 aa18.62■□□□□ 0.57
UBR5-201ENST00000220959 VPS53Q5VIR6 699 aa18.62■□□□□ 0.57
UBR5-201ENST00000220959 RWDD1Q9H446 243 aaPredicted RBP18.62■□□□□ 0.57
UBR5-201ENST00000220959 FRAT2O75474 233 aaPredicted RBP18.62■□□□□ 0.57
UBR5-201ENST00000220959 TNNT3P45378 269 aaPredicted RBP18.61■□□□□ 0.57
UBR5-201ENST00000220959 U2AF1L5P0DN76 240 aaPredicted RBP18.61■□□□□ 0.57
UBR5-201ENST00000220959 U2AF1Q01081 240 aaKnown RBP eCLIP18.61■□□□□ 0.577e-7■■□□□ 12.9
UBR5-201ENST00000220959 GZF1Q9H116 711 aaPredicted RBP18.6■□□□□ 0.57
UBR5-201ENST00000220959 GTF2E1P29083 439 aaPredicted RBP18.58■□□□□ 0.56
UBR5-201ENST00000220959 KTN1Q86UP2 1357 aaKnown RBP18.57■□□□□ 0.56
UBR5-201ENST00000220959 ARID3AQ99856 593 aa18.57■□□□□ 0.56
UBR5-201ENST00000220959 PMFBP1Q8TBY8 1022 aa18.56■□□□□ 0.56
UBR5-201ENST00000220959 TPM3P06753 285 aa18.56■□□□□ 0.56
UBR5-201ENST00000220959 HMMRO75330 724 aa18.55■□□□□ 0.56
UBR5-201ENST00000220959 TOMM22Q9NS69 142 aa18.55■□□□□ 0.56
UBR5-201ENST00000220959 KRI1Q8N9T8 703 aaKnown RBP18.55■□□□□ 0.56
UBR5-201ENST00000220959 EIF4G1Q04637 1599 aaKnown RBP18.54■□□□□ 0.56
UBR5-201ENST00000220959 DEKP35659 375 aaKnown RBP18.54■□□□□ 0.56
UBR5-201ENST00000220959 SLC4A10Q6U841 1118 aa18.53■□□□□ 0.56
UBR5-201ENST00000220959 SF3A1Q15459 793 aaKnown RBP18.53■□□□□ 0.56
UBR5-201ENST00000220959 ANO8Q9HCE9 1232 aaPredicted RBP18.52■□□□□ 0.56
UBR5-201ENST00000220959 SLKQ9H2G2 1235 aaPredicted RBP18.52■□□□□ 0.56
UBR5-201ENST00000220959 PES1O00541 588 aaKnown RBP18.52■□□□□ 0.55
UBR5-201ENST00000220959 TPD52L1Q16890 204 aaPredicted RBP18.52■□□□□ 0.55
UBR5-201ENST00000220959 KIF3AQ9Y496 699 aa18.51■□□□□ 0.55
UBR5-201ENST00000220959 SMC4Q9NTJ3 1288 aa18.51■□□□□ 0.55
UBR5-201ENST00000220959 MFAP1P55081 439 aaKnown RBP18.5■□□□□ 0.55
UBR5-201ENST00000220959 RCAN3Q9UKA8 241 aa18.5■□□□□ 0.55
UBR5-201ENST00000220959 CEP164Q9UPV0 1460 aa18.5■□□□□ 0.55
UBR5-201ENST00000220959 TSR1Q2NL82 804 aaKnown RBP18.5■□□□□ 0.55
UBR5-201ENST00000220959 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
UBR5-201ENST00000220959 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
UBR5-201ENST00000220959 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.49■□□□□ 0.55
UBR5-201ENST00000220959 KIF16BQ96L93 1317 aa18.48■□□□□ 0.55
UBR5-201ENST00000220959 PHF14O94880 888 aa18.48■□□□□ 0.55
UBR5-201ENST00000220959 NGDNQ8NEJ9 315 aaKnown RBP18.48■□□□□ 0.55
UBR5-201ENST00000220959 EID1Q9Y6B2 187 aa18.48■□□□□ 0.55
UBR5-201ENST00000220959 AMPHP49418 695 aa18.47■□□□□ 0.55
UBR5-201ENST00000220959 WWC1Q8IX03 1113 aa18.47■□□□□ 0.55
UBR5-201ENST00000220959 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
UBR5-201ENST00000220959 NOL8Q76FK4 1167 aaKnown RBP18.46■□□□□ 0.55
UBR5-201ENST00000220959 TCERG1O14776 1098 aaKnown RBP18.46■□□□□ 0.55
UBR5-201ENST00000220959 ROCK2O75116 1388 aaKnown RBP18.46■□□□□ 0.55
UBR5-201ENST00000220959 RB1CC1Q8TDY2 1594 aa18.46■□□□□ 0.55
UBR5-201ENST00000220959 TPM2P07951 284 aa18.45■□□□□ 0.54
UBR5-201ENST00000220959 AKAP17AQ02040 695 aaKnown RBP18.45■□□□□ 0.54
UBR5-201ENST00000220959 CCER2I3L3R5 266 aa18.44■□□□□ 0.54
UBR5-201ENST00000220959 TCEAL9Q9UHQ7 104 aa18.44■□□□□ 0.54
UBR5-201ENST00000220959 GOLGA6L3A6NEY3 463 aa18.44■□□□□ 0.54
UBR5-201ENST00000220959 TERF2IPQ9NYB0 399 aa18.44■□□□□ 0.54
UBR5-201ENST00000220959 HSPA5P11021 654 aaKnown RBP18.43■□□□□ 0.54
UBR5-201ENST00000220959 LMOD3Q0VAK6 560 aa18.43■□□□□ 0.54
UBR5-201ENST00000220959 H3BQV1 296 aa18.43■□□□□ 0.54
UBR5-201ENST00000220959 IFFO2Q5TF58 517 aa18.43■□□□□ 0.54
UBR5-201ENST00000220959 PKD2Q13563 968 aa18.43■□□□□ 0.54
UBR5-201ENST00000220959 ST18O60284 1047 aa18.43■□□□□ 0.54
UBR5-201ENST00000220959 LTV1Q96GA3 475 aaPredicted RBP18.43■□□□□ 0.54
UBR5-201ENST00000220959 RALBP1Q15311 655 aa18.42■□□□□ 0.54
UBR5-201ENST00000220959 CTDP1Q9Y5B0 961 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms