RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
GPATCH1-201ENST00000170564 ITSN2Q9NZM3 1697 aa16.5■□□□□ 0.23
GPATCH1-201ENST00000170564 CHIC2Q9UKJ5 165 aa16.49■□□□□ 0.23
GPATCH1-201ENST00000170564 ABCC5O15440 1437 aa16.49■□□□□ 0.23
GPATCH1-201ENST00000170564 ZNF316A6NFI3 1004 aaPredicted RBP16.49■□□□□ 0.23
GPATCH1-201ENST00000170564 DAPK1P53355 1430 aa16.49■□□□□ 0.23
GPATCH1-201ENST00000170564 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
GPATCH1-201ENST00000170564 ABCC2Q92887 1545 aa16.48■□□□□ 0.23
GPATCH1-201ENST00000170564 RRP7BPQ9NSQ0 103 aa16.46■□□□□ 0.23
GPATCH1-201ENST00000170564 DENND4BO75064 1496 aaPredicted RBP16.46■□□□□ 0.23
GPATCH1-201ENST00000170564 AKNAQ7Z591 1439 aa16.44■□□□□ 0.22
GPATCH1-201ENST00000170564 PLEKHD1A6NEE1 506 aa16.44■□□□□ 0.22
GPATCH1-201ENST00000170564 CROCC2H7BZ55 1655 aa16.44■□□□□ 0.22
GPATCH1-201ENST00000170564 CDC42BPBQ9Y5S2 1711 aa16.43■□□□□ 0.22
GPATCH1-201ENST00000170564 MIER1Q8N108 512 aa16.43■□□□□ 0.22
GPATCH1-201ENST00000170564 TTC37Q6PGP7 1564 aa16.43■□□□□ 0.22
GPATCH1-201ENST00000170564 ZCCHC11Q5TAX3 1644 aaKnown RBP16.42■□□□□ 0.22
GPATCH1-201ENST00000170564 SIN3AQ96ST3 1273 aa16.42■□□□□ 0.22
GPATCH1-201ENST00000170564 CFDP1Q9UEE9 299 aaPredicted RBP16.42■□□□□ 0.22
GPATCH1-201ENST00000170564 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.39■□□□□ 0.21
GPATCH1-201ENST00000170564 PREX2Q70Z35 1606 aa16.39■□□□□ 0.21
GPATCH1-201ENST00000170564 UHRF1BP1LA0JNW5 1464 aa16.38■□□□□ 0.21
GPATCH1-201ENST00000170564 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
GPATCH1-201ENST00000170564 KDM5BQ9UGL1 1544 aa16.38■□□□□ 0.21
GPATCH1-201ENST00000170564 SAMD9LQ8IVG5 1584 aa16.37■□□□□ 0.21
GPATCH1-201ENST00000170564 ZNF777Q9ULD5 760 aaPredicted RBP16.37■□□□□ 0.21
GPATCH1-201ENST00000170564 ADGBQ8N7X0 1667 aa16.36■□□□□ 0.21
GPATCH1-201ENST00000170564 NCOA1Q15788 1441 aa16.34■□□□□ 0.21
GPATCH1-201ENST00000170564 MBD5Q9P267 1494 aa16.34■□□□□ 0.21
GPATCH1-201ENST00000170564 ADGRL2O95490 1459 aa16.33■□□□□ 0.2
GPATCH1-201ENST00000170564 MYO5CQ9NQX4 1742 aa16.3■□□□□ 0.2
GPATCH1-201ENST00000170564 ARHGEF5Q12774 1597 aa16.29■□□□□ 0.2
GPATCH1-201ENST00000170564 HNRNPMP52272 730 aaKnown RBP eCLIP16.28■□□□□ 0.2
GPATCH1-201ENST00000170564 SHANK2Q9UPX8 1470 aa16.28■□□□□ 0.2
GPATCH1-201ENST00000170564 OSCARQ8IYS5 282 aa16.27■□□□□ 0.19
GPATCH1-201ENST00000170564 SYCP2Q9BX26 1530 aa16.27■□□□□ 0.19
GPATCH1-201ENST00000170564 C9orf84Q5VXU9 1444 aa16.26■□□□□ 0.19
GPATCH1-201ENST00000170564 KCNH8Q96L42 1107 aa16.26■□□□□ 0.19
GPATCH1-201ENST00000170564 ARHGEF12Q9NZN5 1544 aa16.26■□□□□ 0.19
GPATCH1-201ENST00000170564 FOXD1Q16676 465 aa16.25■□□□□ 0.19
GPATCH1-201ENST00000170564 ARHGAP5Q13017 1502 aa16.25■□□□□ 0.19
GPATCH1-201ENST00000170564 PZPP20742 1482 aa16.25■□□□□ 0.19
GPATCH1-201ENST00000170564 MPHOSPH9Q99550 1183 aa16.25■□□□□ 0.19
GPATCH1-201ENST00000170564 TRIM52Q96A61 297 aa16.24■□□□□ 0.19
GPATCH1-201ENST00000170564 CCDC141Q6ZP82 1450 aa16.21■□□□□ 0.19
GPATCH1-201ENST00000170564 PLCH2O75038 1416 aa16.21■□□□□ 0.19
GPATCH1-201ENST00000170564 ANKRD30AQ9BXX3 1397 aa16.2■□□□□ 0.18
GPATCH1-201ENST00000170564 WDR7Q9Y4E6 1490 aa16.2■□□□□ 0.18
GPATCH1-201ENST00000170564 PPP1R15AO75807 674 aaPredicted RBP16.2■□□□□ 0.18
GPATCH1-201ENST00000170564 ANKRD50Q9ULJ7 1429 aa16.19■□□□□ 0.18
GPATCH1-201ENST00000170564 ANKRD30BQ9BXX2 1392 aa16.18■□□□□ 0.18
GPATCH1-201ENST00000170564 TIMELESSQ9UNS1 1208 aa16.18■□□□□ 0.18
GPATCH1-201ENST00000170564 MAST1Q9Y2H9 1570 aa16.17■□□□□ 0.18
GPATCH1-201ENST00000170564 ABCC1P33527 1531 aa16.17■□□□□ 0.18
GPATCH1-201ENST00000170564 KIF15Q9NS87 1388 aa16.16■□□□□ 0.18
GPATCH1-201ENST00000170564 KIAA1107Q9UPP5 1409 aa16.16■□□□□ 0.18
GPATCH1-201ENST00000170564 ABCA9Q8IUA7 1624 aa16.16■□□□□ 0.18
GPATCH1-201ENST00000170564 ASXL2Q76L83 1435 aa16.15■□□□□ 0.18
GPATCH1-201ENST00000170564 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
GPATCH1-201ENST00000170564 TRAPPC8Q9Y2L5 1435 aa16.13■□□□□ 0.17
GPATCH1-201ENST00000170564 TSPY4P0CV99 314 aa16.13■□□□□ 0.17
GPATCH1-201ENST00000170564 TSPY10P0CW01 314 aa16.13■□□□□ 0.17
GPATCH1-201ENST00000170564 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
GPATCH1-201ENST00000170564 PLXNC1O60486 1568 aa16.12■□□□□ 0.17
GPATCH1-201ENST00000170564 KDM5DQ9BY66 1539 aa16.12■□□□□ 0.17
GPATCH1-201ENST00000170564 ARAP3Q8WWN8 1544 aa16.12■□□□□ 0.17
GPATCH1-201ENST00000170564 RPRD2Q5VT52 1461 aaKnown RBP16.11■□□□□ 0.17
GPATCH1-201ENST00000170564 TEX14Q8IWB6 1497 aa16.1■□□□□ 0.17
GPATCH1-201ENST00000170564 PLEKHH2Q8IVE3 1493 aa16.1■□□□□ 0.17
GPATCH1-201ENST00000170564 RSPH4AQ5TD94 716 aa16.08■□□□□ 0.16
GPATCH1-201ENST00000170564 BCANQ96GW7 911 aa16.08■□□□□ 0.16
GPATCH1-201ENST00000170564 EFCAB2Q5VUJ9 269 aa16.07■□□□□ 0.16
GPATCH1-201ENST00000170564 HIRIP3Q9BW71 556 aaPredicted RBP16.07■□□□□ 0.16
GPATCH1-201ENST00000170564 NUP155O75694 1391 aa16.07■□□□□ 0.16
GPATCH1-201ENST00000170564 SUPT16HQ9Y5B9 1047 aaKnown RBP16.06■□□□□ 0.16
GPATCH1-201ENST00000170564 UNC13BO14795 1591 aa16.06■□□□□ 0.16
GPATCH1-201ENST00000170564 FANCAO15360 1455 aa16.06■□□□□ 0.16
GPATCH1-201ENST00000170564 L3MBTL2Q969R5 705 aa16.06■□□□□ 0.16
GPATCH1-201ENST00000170564 PKD2Q13563 968 aa16.06■□□□□ 0.16
GPATCH1-201ENST00000170564 ZFYVE16Q7Z3T8 1539 aa16.05■□□□□ 0.16
GPATCH1-201ENST00000170564 FAM135AQ9P2D6 1515 aa16.05■□□□□ 0.16
GPATCH1-201ENST00000170564 AFAP1Q8N556 730 aa16.04■□□□□ 0.16
GPATCH1-201ENST00000170564 RIMBP3CA6NJZ7 1639 aa16.02■□□□□ 0.15
GPATCH1-201ENST00000170564 RIMBP3BA6NNM3 1639 aa16.02■□□□□ 0.15
GPATCH1-201ENST00000170564 RIMBP3Q9UFD9 1639 aa16.02■□□□□ 0.15
GPATCH1-201ENST00000170564 DUOX2Q9NRD8 1548 aa16.02■□□□□ 0.15
GPATCH1-201ENST00000170564 INO80Q9ULG1 1556 aaPredicted RBP16.02■□□□□ 0.15
GPATCH1-201ENST00000170564 MAGI2Q86UL8 1455 aa16.01■□□□□ 0.15
GPATCH1-201ENST00000170564 NBPF8Q3BBV2 869 aa16■□□□□ 0.15
GPATCH1-201ENST00000170564 IQGAP3Q86VI3 1631 aa16■□□□□ 0.15
GPATCH1-201ENST00000170564 ADGRL1O94910 1474 aa15.98■□□□□ 0.15
GPATCH1-201ENST00000170564 ERBINQ96RT1 1412 aa15.98■□□□□ 0.15
GPATCH1-201ENST00000170564 PLA2R1Q13018 1463 aa15.98■□□□□ 0.15
GPATCH1-201ENST00000170564 RTEL1-TNFRSF6BF6WH68 1400 aa15.96■□□□□ 0.15
GPATCH1-201ENST00000170564 SCAPERQ9BY12 1400 aa15.96■□□□□ 0.15
GPATCH1-201ENST00000170564 ATP7AQ04656 1500 aa15.96■□□□□ 0.15
GPATCH1-201ENST00000170564 KIDINS220Q9ULH0 1771 aa15.96■□□□□ 0.14
GPATCH1-201ENST00000170564 TSHZ2Q9NRE2 1034 aa15.95■□□□□ 0.14
GPATCH1-201ENST00000170564 SPAG9O60271 1321 aaKnown RBP15.94■□□□□ 0.14
GPATCH1-201ENST00000170564 ANP32EQ9BTT0 268 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms