RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 Rfx7F8VPJ6 1459 aa22.62■■□□□ 1.21
Ldb3-208ENSMUST00000228044 Dennd4bQ3U1Y4 1499 aa22.62■■□□□ 1.21
Ldb3-208ENSMUST00000228044 Chic2Q9D9G3 165 aa22.6■■□□□ 1.21
Ldb3-208ENSMUST00000228044 Caskin1Q6P9K8 1431 aa22.58■■□□□ 1.2
Ldb3-208ENSMUST00000228044 Ccer2J3QPU5 274 aa22.58■■□□□ 1.2
Ldb3-208ENSMUST00000228044 Wdr7Q920I9 1489 aa22.57■■□□□ 1.2
Ldb3-208ENSMUST00000228044 TonslQ6NZL6 1363 aa22.56■■□□□ 1.2
Ldb3-208ENSMUST00000228044 Ythdc2B2RR83 1445 aaKnown RBP22.54■■□□□ 1.2
Ldb3-208ENSMUST00000228044 Mtus2Q3UHD3 1353 aa22.54■■□□□ 1.2
Ldb3-208ENSMUST00000228044 Cabp1Q9JLK7 227 aa22.54■■□□□ 1.2
Ldb3-208ENSMUST00000228044 Fhod3Q76LL6 1578 aa22.53■■□□□ 1.2
Ldb3-208ENSMUST00000228044 Rnf17Q99MV7 1640 aa22.52■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Eid3Q3V124 375 aa22.51■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Ankrd36D3Z4K0 1415 aa22.51■■□□□ 1.19
Ldb3-208ENSMUST00000228044 SphkapQ6NSW3 1687 aa22.51■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Il16O54824 1322 aa22.51■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Cdk11bP24788 784 aaKnown RBP22.51■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Pelp1Q9DBD5 1123 aaKnown RBP22.51■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Gapvd1Q6PAR5 1458 aa22.51■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Tdrd9Q14BI7 1383 aa22.5■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Kdm3bQ6ZPY7 1562 aa22.5■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Las1lA2BE28 776 aaKnown RBP22.5■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Abca8bQ8K440 1620 aa22.49■■□□□ 1.19
Ldb3-208ENSMUST00000228044 PtprtQ99M80 1454 aa22.49■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Pabpn1Q8CCS6 302 aaKnown RBP22.48■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Igf1rQ60751 1373 aa22.46■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Atp10dQ8K2X1 1416 aa22.46■■□□□ 1.19
Ldb3-208ENSMUST00000228044 Gm32742A0A1B0GT42 1604 aa22.45■■□□□ 1.18
Ldb3-208ENSMUST00000228044 Arhgap5P97393 1501 aa22.43■■□□□ 1.18
Ldb3-208ENSMUST00000228044 Pdcd11Q6NS46 1862 aaKnown RBP22.43■■□□□ 1.18
Ldb3-208ENSMUST00000228044 Adgrb2Q8CGM1 1561 aa22.42■■□□□ 1.18
Ldb3-208ENSMUST00000228044 NclP09405 707 aaKnown RBP22.42■■□□□ 1.18
Ldb3-208ENSMUST00000228044 Cep170Q6A065 1588 aa22.41■■□□□ 1.18
Ldb3-208ENSMUST00000228044 Znf608Q56A10 1511 aa22.39■■□□□ 1.18
Ldb3-208ENSMUST00000228044 Cfap74Q3UY96 1578 aa22.39■■□□□ 1.17
Ldb3-208ENSMUST00000228044 AI481877A2ALV5 1481 aa22.38■■□□□ 1.17
Ldb3-208ENSMUST00000228044 Lrrc9Q8CDN9 1456 aa22.38■■□□□ 1.17
Ldb3-208ENSMUST00000228044 Fmn2Q9JL04 1578 aa22.37■■□□□ 1.17
Ldb3-208ENSMUST00000228044 Ube2uB1AUC4 352 aa22.36■■□□□ 1.17
Ldb3-208ENSMUST00000228044 Setbp1Q9Z180 1582 aa22.35■■□□□ 1.17
Ldb3-208ENSMUST00000228044 AlkP97793 1621 aa22.34■■□□□ 1.17
Ldb3-208ENSMUST00000228044 Trappc8E9PWG2 1437 aa22.33■■□□□ 1.17
Ldb3-208ENSMUST00000228044 Supt5hO55201 1082 aaKnown RBP22.32■■□□□ 1.16
Ldb3-208ENSMUST00000228044 Abcc3B2RX12 1523 aa22.31■■□□□ 1.16
Ldb3-208ENSMUST00000228044 Pcgf6Q99NA9 353 aa22.31■■□□□ 1.16
Ldb3-208ENSMUST00000228044 Mast1Q9R1L5 1570 aa22.31■■□□□ 1.16
Ldb3-208ENSMUST00000228044 Lamc1P02468 1607 aaKnown RBP22.31■■□□□ 1.16
Ldb3-208ENSMUST00000228044 Hecw1Q8K4P8 1604 aa22.3■■□□□ 1.16
Ldb3-208ENSMUST00000228044 Mphosph9A6H5Y1 991 aa22.29■■□□□ 1.16
Ldb3-208ENSMUST00000228044 Neurl4Q5NCX5 1563 aa22.29■■□□□ 1.16
Ldb3-208ENSMUST00000228044 Adgrl2Q8JZZ7 1487 aa22.28■■□□□ 1.16
Ldb3-208ENSMUST00000228044 Zfp644E9QA22 1323 aa22.28■■□□□ 1.16
Ldb3-208ENSMUST00000228044 Kif21bQ9QXL1 1668 aa22.28■■□□□ 1.16
Ldb3-208ENSMUST00000228044 Ifnlr1Q8CGK5 535 aa22.26■■□□□ 1.15
Ldb3-208ENSMUST00000228044 Aebp2Q9Z248 504 aaKnown RBP22.24■■□□□ 1.15
Ldb3-208ENSMUST00000228044 Zfyve16Q80U44 1528 aa22.24■■□□□ 1.15
Ldb3-208ENSMUST00000228044 Hspa5P20029 655 aaKnown RBP22.24■■□□□ 1.15
Ldb3-208ENSMUST00000228044 Trpm2Q91YD4 1506 aa22.24■■□□□ 1.15
Ldb3-208ENSMUST00000228044 Kidins220E9Q9B7 1793 aa22.23■■□□□ 1.15
Ldb3-208ENSMUST00000228044 Cdc42bpbQ7TT50 1713 aa22.23■■□□□ 1.15
Ldb3-208ENSMUST00000228044 Sart1Q9Z315 806 aaKnown RBP22.21■■□□□ 1.15
Ldb3-208ENSMUST00000228044 Gm156Q58A37 223 aa22.18■■□□□ 1.14
Ldb3-208ENSMUST00000228044 Abca9Q8K449 1623 aa22.17■■□□□ 1.14
Ldb3-208ENSMUST00000228044 Supt6hQ62383 1726 aaKnown RBP22.17■■□□□ 1.14
Ldb3-208ENSMUST00000228044 Arid3cA6PWV5 409 aa22.15■■□□□ 1.14
Ldb3-208ENSMUST00000228044 Ak9G3UYQ4 1894 aa22.14■■□□□ 1.14
Ldb3-208ENSMUST00000228044 Ssh2Q5SW75 1423 aa22.14■■□□□ 1.13
Ldb3-208ENSMUST00000228044 Wdr66E9Q743 1299 aa22.13■■□□□ 1.13
Ldb3-208ENSMUST00000228044 Sall2Q9QX96 1004 aa22.13■■□□□ 1.13
Ldb3-208ENSMUST00000228044 Adgrl3Q80TS3 1537 aa22.13■■□□□ 1.13
Ldb3-208ENSMUST00000228044 Naip5Q9R016 1403 aa22.13■■□□□ 1.13
Ldb3-208ENSMUST00000228044 Nup155Q99P88 1391 aaKnown RBP22.13■■□□□ 1.13
Ldb3-208ENSMUST00000228044 Pprc1Q6NZN1 1644 aa22.12■■□□□ 1.13
Ldb3-208ENSMUST00000228044 Pkd2O35245 966 aa22.12■■□□□ 1.13
Ldb3-208ENSMUST00000228044 Rrp7aQ9D1C9 280 aaKnown RBP22.12■■□□□ 1.13
Ldb3-208ENSMUST00000228044 Ttll5Q8CHB8 1328 aa22.11■■□□□ 1.13
Ldb3-208ENSMUST00000228044 Rprd2Q6NXI6 1469 aaKnown RBP22.09■■□□□ 1.13
Ldb3-208ENSMUST00000228044 Prdm16A2A935 1275 aa22.08■■□□□ 1.13
Ldb3-208ENSMUST00000228044 Camsap2Q8C1B1 1461 aa22.08■■□□□ 1.12
Ldb3-208ENSMUST00000228044 ClspnQ80YR7 1315 aa22.07■■□□□ 1.12
Ldb3-208ENSMUST00000228044 Pik3c2gO70167 1506 aa22.06■■□□□ 1.12
Ldb3-208ENSMUST00000228044 Map4P27546 1125 aaKnown RBP22.04■■□□□ 1.12
Ldb3-208ENSMUST00000228044 Usp47Q8BY87 1376 aa22.04■■□□□ 1.12
Ldb3-208ENSMUST00000228044 Abca17E9PX95 1733 aa22.03■■□□□ 1.12
Ldb3-208ENSMUST00000228044 Asxl1P59598 1514 aa22.02■■□□□ 1.12
Ldb3-208ENSMUST00000228044 Xrn1P97789 1719 aaKnown RBP22.01■■□□□ 1.11
Ldb3-208ENSMUST00000228044 Col17a1Q07563 1470 aa22.01■■□□□ 1.11
Ldb3-208ENSMUST00000228044 Trak1Q6PD31 939 aa22.01■■□□□ 1.11
Ldb3-208ENSMUST00000228044 PtprgQ05909 1442 aa22.01■■□□□ 1.11
Ldb3-208ENSMUST00000228044 Map3k5O35099 1380 aa22.01■■□□□ 1.11
Ldb3-208ENSMUST00000228044 Clstn2Q9ER65 966 aa22■■□□□ 1.11
Ldb3-208ENSMUST00000228044 Dhx9O70133 1380 aaKnown RBP22■■□□□ 1.11
Ldb3-208ENSMUST00000228044 Spag9Q58A65 1321 aaKnown RBP21.98■■□□□ 1.11
Ldb3-208ENSMUST00000228044 Ppargc1bQ8VHJ7 1014 aa21.97■■□□□ 1.11
Ldb3-208ENSMUST00000228044 Lemd3Q9WU40 921 aa21.96■■□□□ 1.11
Ldb3-208ENSMUST00000228044 Usp54Q8BL06 1588 aaKnown RBP21.96■■□□□ 1.11
Ldb3-208ENSMUST00000228044 Kif14L0N7N1 1674 aaKnown RBP21.95■■□□□ 1.1
Ldb3-208ENSMUST00000228044 Clasp1Q80TV8 1535 aaKnown RBP21.95■■□□□ 1.1
Ldb3-208ENSMUST00000228044 Nos1Q9Z0J4 1429 aa21.95■■□□□ 1.1
Ldb3-208ENSMUST00000228044 DroshaQ5HZJ0 1373 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms