RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 Fam50aQ9WV03 339 aaKnown RBP24.74■■□□□ 1.55
Hoxc4-202ENSMUST00000165375 Aplp2Q06335 707 aa24.73■■□□□ 1.55
Hoxc4-202ENSMUST00000165375 Cul7Q8VE73 1689 aa24.73■■□□□ 1.55
Hoxc4-202ENSMUST00000165375 Kiaa1210E9Q0C6 1637 aa24.72■■□□□ 1.55
Hoxc4-202ENSMUST00000165375 A2mQ6GQT1 1474 aa24.72■■□□□ 1.55
Hoxc4-202ENSMUST00000165375 Csrnp3P59055 597 aa24.71■■□□□ 1.55
Hoxc4-202ENSMUST00000165375 Wdr7Q920I9 1489 aa24.71■■□□□ 1.55
Hoxc4-202ENSMUST00000165375 Mlh3A0A1Y7VMP7 1443 aa24.69■■□□□ 1.54
Hoxc4-202ENSMUST00000165375 AI481877A2ALV5 1481 aa24.69■■□□□ 1.54
Hoxc4-202ENSMUST00000165375 Adcy10Q8C0T9 1614 aa24.69■■□□□ 1.54
Hoxc4-202ENSMUST00000165375 Arhgef40Q3UPH7 1517 aa24.69■■□□□ 1.54
Hoxc4-202ENSMUST00000165375 Fam208aQ69ZR9 1610 aaKnown RBP24.67■■□□□ 1.54
Hoxc4-202ENSMUST00000165375 Naip2Q9QUK4 1447 aa24.67■■□□□ 1.54
Hoxc4-202ENSMUST00000165375 Gm156Q58A37 223 aa24.67■■□□□ 1.54
Hoxc4-202ENSMUST00000165375 Cdk11bP24788 784 aaKnown RBP24.66■■□□□ 1.54
Hoxc4-202ENSMUST00000165375 Atp10dQ8K2X1 1416 aa24.66■■□□□ 1.54
Hoxc4-202ENSMUST00000165375 Ifnlr1Q8CGK5 535 aa24.65■■□□□ 1.54
Hoxc4-202ENSMUST00000165375 Mia2Q91ZV0 1396 aa24.65■■□□□ 1.54
Hoxc4-202ENSMUST00000165375 Caskin1Q6P9K8 1431 aa24.64■■□□□ 1.53
Hoxc4-202ENSMUST00000165375 Abcc5Q9R1X5 1436 aa24.61■■□□□ 1.53
Hoxc4-202ENSMUST00000165375 Chic2Q9D9G3 165 aa24.59■■□□□ 1.53
Hoxc4-202ENSMUST00000165375 Tdrd9Q14BI7 1383 aa24.59■■□□□ 1.53
Hoxc4-202ENSMUST00000165375 Fhad1A6PWD2 1420 aa24.58■■□□□ 1.53
Hoxc4-202ENSMUST00000165375 UacaQ8CGB3 1411 aa24.58■■□□□ 1.53
Hoxc4-202ENSMUST00000165375 Abca8bQ8K440 1620 aa24.58■■□□□ 1.53
Hoxc4-202ENSMUST00000165375 Plekhh2Q8C115 1491 aa24.58■■□□□ 1.53
Hoxc4-202ENSMUST00000165375 Lrrc9Q8CDN9 1456 aa24.57■■□□□ 1.52
Hoxc4-202ENSMUST00000165375 Kdm6bQ5NCY0 1641 aa24.57■■□□□ 1.52
Hoxc4-202ENSMUST00000165375 Znf608Q56A10 1511 aa24.57■■□□□ 1.52
Hoxc4-202ENSMUST00000165375 Adgrl3Q80TS3 1537 aa24.56■■□□□ 1.52
Hoxc4-202ENSMUST00000165375 Mtus2Q3UHD3 1353 aa24.55■■□□□ 1.52
Hoxc4-202ENSMUST00000165375 Col17a1Q07563 1470 aa24.55■■□□□ 1.52
Hoxc4-202ENSMUST00000165375 Cabp1Q9JLK7 227 aa24.55■■□□□ 1.52
Hoxc4-202ENSMUST00000165375 Vps8Q0P5W1 1427 aa24.53■■□□□ 1.52
Hoxc4-202ENSMUST00000165375 Rnf17Q99MV7 1640 aa24.53■■□□□ 1.52
Hoxc4-202ENSMUST00000165375 Arhgap5P97393 1501 aa24.52■■□□□ 1.52
Hoxc4-202ENSMUST00000165375 Arid3cA6PWV5 409 aa24.5■■□□□ 1.51
Hoxc4-202ENSMUST00000165375 Il16O54824 1322 aa24.5■■□□□ 1.51
Hoxc4-202ENSMUST00000165375 Rfx7F8VPJ6 1459 aa24.48■■□□□ 1.51
Hoxc4-202ENSMUST00000165375 Ccer2J3QPU5 274 aa24.46■■□□□ 1.51
Hoxc4-202ENSMUST00000165375 NclP09405 707 aaKnown RBP24.46■■□□□ 1.51
Hoxc4-202ENSMUST00000165375 Setbp1Q9Z180 1582 aa24.43■■□□□ 1.5
Hoxc4-202ENSMUST00000165375 Cfap74Q3UY96 1578 aa24.42■■□□□ 1.5
Hoxc4-202ENSMUST00000165375 Gm32742A0A1B0GT42 1604 aa24.4■■□□□ 1.5
Hoxc4-202ENSMUST00000165375 Trappc8E9PWG2 1437 aa24.39■■□□□ 1.5
Hoxc4-202ENSMUST00000165375 ClspnQ80YR7 1315 aa24.39■■□□□ 1.49
Hoxc4-202ENSMUST00000165375 Kdm3bQ6ZPY7 1562 aa24.37■■□□□ 1.49
Hoxc4-202ENSMUST00000165375 Nop58Q6DFW4 536 aaKnown RBP24.37■■□□□ 1.49
Hoxc4-202ENSMUST00000165375 Pdcd11Q6NS46 1862 aaKnown RBP24.37■■□□□ 1.49
Hoxc4-202ENSMUST00000165375 Zfyve16Q80U44 1528 aa24.36■■□□□ 1.49
Hoxc4-202ENSMUST00000165375 Dennd4bQ3U1Y4 1499 aa24.36■■□□□ 1.49
Hoxc4-202ENSMUST00000165375 Ube2uB1AUC4 352 aa24.35■■□□□ 1.49
Hoxc4-202ENSMUST00000165375 Ak9G3UYQ4 1894 aa24.35■■□□□ 1.49
Hoxc4-202ENSMUST00000165375 Abcc3B2RX12 1523 aa24.34■■□□□ 1.49
Hoxc4-202ENSMUST00000165375 Sart1Q9Z315 806 aaKnown RBP24.34■■□□□ 1.49
Hoxc4-202ENSMUST00000165375 SphkapQ6NSW3 1687 aa24.33■■□□□ 1.49
Hoxc4-202ENSMUST00000165375 Adgrb2Q8CGM1 1561 aa24.31■■□□□ 1.48
Hoxc4-202ENSMUST00000165375 Pprc1Q6NZN1 1644 aa24.29■■□□□ 1.48
Hoxc4-202ENSMUST00000165375 Wdr66E9Q743 1299 aa24.28■■□□□ 1.48
Hoxc4-202ENSMUST00000165375 Fmn2Q9JL04 1578 aa24.27■■□□□ 1.48
Hoxc4-202ENSMUST00000165375 Neurl4Q5NCX5 1563 aa24.25■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Eid3Q3V124 375 aa24.25■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Mast1Q9R1L5 1570 aa24.24■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Adgrl2Q8JZZ7 1487 aa24.24■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Rrp7aQ9D1C9 280 aaKnown RBP24.23■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Abca9Q8K449 1623 aa24.23■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Kidins220E9Q9B7 1793 aa24.23■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Ttbk1Q6PCN3 1308 aa24.23■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Clasp1Q80TV8 1535 aaKnown RBP24.22■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Hecw1Q8K4P8 1604 aa24.22■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Ppp1r18Q8BQ30 594 aa24.22■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Aebp2Q9Z248 504 aaKnown RBP24.22■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Fhod3Q76LL6 1578 aa24.21■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Ankrd36D3Z4K0 1415 aa24.21■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Lemd3Q9WU40 921 aa24.2■■□□□ 1.47
Hoxc4-202ENSMUST00000165375 Prdm16A2A935 1275 aa24.2■■□□□ 1.46
Hoxc4-202ENSMUST00000165375 Zfp644E9QA22 1323 aa24.19■■□□□ 1.46
Hoxc4-202ENSMUST00000165375 Mphosph9A6H5Y1 991 aa24.17■■□□□ 1.46
Hoxc4-202ENSMUST00000165375 Cdc42bpbQ7TT50 1713 aa24.17■■□□□ 1.46
Hoxc4-202ENSMUST00000165375 TonslQ6NZL6 1363 aa24.16■■□□□ 1.46
Hoxc4-202ENSMUST00000165375 AlkP97793 1621 aa24.16■■□□□ 1.46
Hoxc4-202ENSMUST00000165375 AglF8VPN4 1532 aa24.13■■□□□ 1.45
Hoxc4-202ENSMUST00000165375 Depdc5P61460 1591 aa24.13■■□□□ 1.45
Hoxc4-202ENSMUST00000165375 Nup155Q99P88 1391 aaKnown RBP24.1■■□□□ 1.45
Hoxc4-202ENSMUST00000165375 Ssh2Q5SW75 1423 aa24.09■■□□□ 1.45
Hoxc4-202ENSMUST00000165375 Ttc37F8VPK0 1563 aa24.08■■□□□ 1.44
Hoxc4-202ENSMUST00000165375 Map3k5O35099 1380 aa24.07■■□□□ 1.44
Hoxc4-202ENSMUST00000165375 OvosQ3UU35 1456 aa24.07■■□□□ 1.44
Hoxc4-202ENSMUST00000165375 Clstn2Q9ER65 966 aa24.07■■□□□ 1.44
Hoxc4-202ENSMUST00000165375 Trpm2Q91YD4 1506 aa24.06■■□□□ 1.44
Hoxc4-202ENSMUST00000165375 Map4P27546 1125 aaKnown RBP24.04■■□□□ 1.44
Hoxc4-202ENSMUST00000165375 Spag9Q58A65 1321 aaKnown RBP24.04■■□□□ 1.44
Hoxc4-202ENSMUST00000165375 Lamc1P02468 1607 aaKnown RBP24.03■■□□□ 1.44
Hoxc4-202ENSMUST00000165375 Ttll5Q8CHB8 1328 aa24.02■■□□□ 1.44
Hoxc4-202ENSMUST00000165375 DiexfQ8BTT6 772 aaKnown RBP24.01■■□□□ 1.43
Hoxc4-202ENSMUST00000165375 Dnajc5P60904 198 aa24.01■■□□□ 1.43
Hoxc4-202ENSMUST00000165375 Nos1Q9Z0J4 1429 aa23.99■■□□□ 1.43
Hoxc4-202ENSMUST00000165375 Pkd2O35245 966 aa23.98■■□□□ 1.43
Hoxc4-202ENSMUST00000165375 Hspa5P20029 655 aaKnown RBP23.98■■□□□ 1.43
Hoxc4-202ENSMUST00000165375 Kdm5cP41230 1554 aa23.97■■□□□ 1.43
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms