RNA–Protein interactions for RNA: ENSMUST00000160422.7

Cpsf4-202, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Cpsf4, Length 1,756 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-202ENSMUST00000160422 Arhgef40Q3UPH7 1517 aa29.71■■■□□ 2.35
Cpsf4-202ENSMUST00000160422 Igf1rQ60751 1373 aa29.71■■■□□ 2.35
Cpsf4-202ENSMUST00000160422 AI481877A2ALV5 1481 aa29.7■■■□□ 2.34
Cpsf4-202ENSMUST00000160422 Adcy10Q8C0T9 1614 aa29.7■■■□□ 2.34
Cpsf4-202ENSMUST00000160422 Mlh3A0A1Y7VMP7 1443 aa29.69■■■□□ 2.34
Cpsf4-202ENSMUST00000160422 Setbp1Q9Z180 1582 aa29.67■■■□□ 2.34
Cpsf4-202ENSMUST00000160422 NefmP08553 848 aa29.67■■■□□ 2.34
Cpsf4-202ENSMUST00000160422 Ak9G3UYQ4 1894 aa29.65■■■□□ 2.34
Cpsf4-202ENSMUST00000160422 Mia2Q91ZV0 1396 aa29.65■■■□□ 2.34
Cpsf4-202ENSMUST00000160422 Ttbk1Q6PCN3 1308 aa29.65■■■□□ 2.34
Cpsf4-202ENSMUST00000160422 Fhad1A6PWD2 1420 aa29.63■■■□□ 2.33
Cpsf4-202ENSMUST00000160422 Caskin1Q6P9K8 1431 aa29.62■■■□□ 2.33
Cpsf4-202ENSMUST00000160422 Abcc5Q9R1X5 1436 aa29.6■■■□□ 2.33
Cpsf4-202ENSMUST00000160422 Fam50aQ9WV03 339 aaKnown RBP29.59■■■□□ 2.33
Cpsf4-202ENSMUST00000160422 Atp10dQ8K2X1 1416 aa29.58■■■□□ 2.33
Cpsf4-202ENSMUST00000160422 Kdm6bQ5NCY0 1641 aa29.58■■■□□ 2.33
Cpsf4-202ENSMUST00000160422 UacaQ8CGB3 1411 aa29.58■■■□□ 2.33
Cpsf4-202ENSMUST00000160422 Ifnlr1Q8CGK5 535 aa29.57■■■□□ 2.32
Cpsf4-202ENSMUST00000160422 Abca8bQ8K440 1620 aa29.57■■■□□ 2.32
Cpsf4-202ENSMUST00000160422 Vps8Q0P5W1 1427 aa29.57■■■□□ 2.32
Cpsf4-202ENSMUST00000160422 Lrrc9Q8CDN9 1456 aa29.54■■■□□ 2.32
Cpsf4-202ENSMUST00000160422 Plekhh2Q8C115 1491 aa29.52■■■□□ 2.32
Cpsf4-202ENSMUST00000160422 Rnf17Q99MV7 1640 aa29.52■■■□□ 2.32
Cpsf4-202ENSMUST00000160422 Cdk11bP24788 784 aaKnown RBP29.52■■■□□ 2.32
Cpsf4-202ENSMUST00000160422 Rfx7F8VPJ6 1459 aa29.51■■■□□ 2.31
Cpsf4-202ENSMUST00000160422 Znf608Q56A10 1511 aa29.5■■■□□ 2.31
Cpsf4-202ENSMUST00000160422 Tdrd9Q14BI7 1383 aa29.49■■■□□ 2.31
Cpsf4-202ENSMUST00000160422 Il16O54824 1322 aa29.46■■■□□ 2.31
Cpsf4-202ENSMUST00000160422 Mtus2Q3UHD3 1353 aa29.45■■■□□ 2.3
Cpsf4-202ENSMUST00000160422 Dennd4bQ3U1Y4 1499 aa29.44■■■□□ 2.3
Cpsf4-202ENSMUST00000160422 Cabp1Q9JLK7 227 aa29.44■■■□□ 2.3
Cpsf4-202ENSMUST00000160422 Chic2Q9D9G3 165 aa29.43■■■□□ 2.3
Cpsf4-202ENSMUST00000160422 Gm32742A0A1B0GT42 1604 aa29.41■■■□□ 2.3
Cpsf4-202ENSMUST00000160422 Arhgap5P97393 1501 aa29.4■■■□□ 2.3
Cpsf4-202ENSMUST00000160422 Cfap74Q3UY96 1578 aa29.38■■■□□ 2.29
Cpsf4-202ENSMUST00000160422 Kdm3bQ6ZPY7 1562 aa29.37■■■□□ 2.29
Cpsf4-202ENSMUST00000160422 Ccer2J3QPU5 274 aa29.35■■■□□ 2.29
Cpsf4-202ENSMUST00000160422 Pdcd11Q6NS46 1862 aaKnown RBP29.35■■■□□ 2.29
Cpsf4-202ENSMUST00000160422 Arid3cA6PWV5 409 aa29.34■■■□□ 2.29
Cpsf4-202ENSMUST00000160422 Abcc3B2RX12 1523 aa29.33■■■□□ 2.29
Cpsf4-202ENSMUST00000160422 Ppp1r18Q8BQ30 594 aa29.32■■■□□ 2.28
Cpsf4-202ENSMUST00000160422 Pcdh10E9PXQ7 1057 aa29.31■■■□□ 2.28
Cpsf4-202ENSMUST00000160422 Zfyve16Q80U44 1528 aa29.31■■■□□ 2.28
Cpsf4-202ENSMUST00000160422 SphkapQ6NSW3 1687 aa29.31■■■□□ 2.28
Cpsf4-202ENSMUST00000160422 Clasp1Q80TV8 1535 aaKnown RBP29.31■■■□□ 2.28
Cpsf4-202ENSMUST00000160422 Trappc8E9PWG2 1437 aa29.3■■■□□ 2.28
Cpsf4-202ENSMUST00000160422 Fhod3Q76LL6 1578 aa29.26■■■□□ 2.27
Cpsf4-202ENSMUST00000160422 Adgrb2Q8CGM1 1561 aa29.25■■■□□ 2.27
Cpsf4-202ENSMUST00000160422 Ttc37F8VPK0 1563 aa29.25■■■□□ 2.27
Cpsf4-202ENSMUST00000160422 Neurl4Q5NCX5 1563 aa29.24■■■□□ 2.27
Cpsf4-202ENSMUST00000160422 NclP09405 707 aaKnown RBP29.24■■■□□ 2.27
Cpsf4-202ENSMUST00000160422 Fmn2Q9JL04 1578 aa29.22■■■□□ 2.27
Cpsf4-202ENSMUST00000160422 Depdc5P61460 1591 aa29.21■■■□□ 2.27
Cpsf4-202ENSMUST00000160422 Mast1Q9R1L5 1570 aa29.21■■■□□ 2.27
Cpsf4-202ENSMUST00000160422 Ankrd36D3Z4K0 1415 aa29.19■■■□□ 2.26
Cpsf4-202ENSMUST00000160422 Adgrl2Q8JZZ7 1487 aa29.18■■■□□ 2.26
Cpsf4-202ENSMUST00000160422 Hecw1Q8K4P8 1604 aa29.18■■■□□ 2.26
Cpsf4-202ENSMUST00000160422 Abca9Q8K449 1623 aa29.16■■■□□ 2.26
Cpsf4-202ENSMUST00000160422 Sart1Q9Z315 806 aaKnown RBP29.16■■■□□ 2.26
Cpsf4-202ENSMUST00000160422 Kidins220E9Q9B7 1793 aa29.15■■■□□ 2.26
Cpsf4-202ENSMUST00000160422 AdgbG3UZ78 1657 aa29.14■■■□□ 2.25
Cpsf4-202ENSMUST00000160422 AlkP97793 1621 aa29.12■■■□□ 2.25
Cpsf4-202ENSMUST00000160422 Eid3Q3V124 375 aa29.08■■■□□ 2.25
Cpsf4-202ENSMUST00000160422 Cdc42bpbQ7TT50 1713 aa29.07■■■□□ 2.24
Cpsf4-202ENSMUST00000160422 Trpm2Q91YD4 1506 aa29.03■■■□□ 2.24
Cpsf4-202ENSMUST00000160422 Zfp644E9QA22 1323 aa29.03■■■□□ 2.24
Cpsf4-202ENSMUST00000160422 TonslQ6NZL6 1363 aa29.02■■■□□ 2.24
Cpsf4-202ENSMUST00000160422 Prdm16A2A935 1275 aa29.02■■■□□ 2.24
Cpsf4-202ENSMUST00000160422 AglF8VPN4 1532 aa29.01■■■□□ 2.24
Cpsf4-202ENSMUST00000160422 Mphosph9A6H5Y1 991 aa29.01■■■□□ 2.23
Cpsf4-202ENSMUST00000160422 Ube2uB1AUC4 352 aa29.01■■■□□ 2.23
Cpsf4-202ENSMUST00000160422 Lamc1P02468 1607 aaKnown RBP28.99■■■□□ 2.23
Cpsf4-202ENSMUST00000160422 Ssh2Q5SW75 1423 aa28.97■■■□□ 2.23
Cpsf4-202ENSMUST00000160422 Rrp7aQ9D1C9 280 aaKnown RBP28.97■■■□□ 2.23
Cpsf4-202ENSMUST00000160422 Lemd3Q9WU40 921 aa28.93■■■□□ 2.22
Cpsf4-202ENSMUST00000160422 Fndc1E9Q043 1732 aa28.91■■■□□ 2.22
Cpsf4-202ENSMUST00000160422 Nup155Q99P88 1391 aaKnown RBP28.9■■■□□ 2.22
Cpsf4-202ENSMUST00000160422 Kif21bQ9QXL1 1668 aa28.89■■■□□ 2.22
Cpsf4-202ENSMUST00000160422 Kdm5cP41230 1554 aa28.87■■■□□ 2.21
Cpsf4-202ENSMUST00000160422 Nos1Q9Z0J4 1429 aa28.87■■■□□ 2.21
Cpsf4-202ENSMUST00000160422 Map3k5O35099 1380 aa28.86■■■□□ 2.21
Cpsf4-202ENSMUST00000160422 OvosQ3UU35 1456 aa28.86■■■□□ 2.21
Cpsf4-202ENSMUST00000160422 Ttll5Q8CHB8 1328 aa28.86■■■□□ 2.21
Cpsf4-202ENSMUST00000160422 Kiaa0556Q8C753 1610 aa28.84■■■□□ 2.21
Cpsf4-202ENSMUST00000160422 Las1lA2BE28 776 aaKnown RBP28.83■■■□□ 2.21
Cpsf4-202ENSMUST00000160422 Atp10aO54827 1508 aa28.81■■■□□ 2.2
Cpsf4-202ENSMUST00000160422 Hspa5P20029 655 aaKnown RBP28.8■■■□□ 2.2
Cpsf4-202ENSMUST00000160422 Spag9Q58A65 1321 aaKnown RBP28.8■■■□□ 2.2
Cpsf4-202ENSMUST00000160422 Map4P27546 1125 aaKnown RBP28.8■■■□□ 2.2
Cpsf4-202ENSMUST00000160422 Abca17E9PX95 1733 aa28.79■■■□□ 2.2
Cpsf4-202ENSMUST00000160422 Clstn2Q9ER65 966 aa28.79■■■□□ 2.2
Cpsf4-202ENSMUST00000160422 Xrn1P97789 1719 aaKnown RBP28.78■■■□□ 2.2
Cpsf4-202ENSMUST00000160422 Supt6hQ62383 1726 aaKnown RBP28.78■■■□□ 2.2
Cpsf4-202ENSMUST00000160422 Pkd2O35245 966 aa28.78■■■□□ 2.2
Cpsf4-202ENSMUST00000160422 PtprgQ05909 1442 aa28.77■■■□□ 2.2
Cpsf4-202ENSMUST00000160422 Asxl1P59598 1514 aa28.73■■■□□ 2.19
Cpsf4-202ENSMUST00000160422 Znf518aB2RRF6 1478 aaKnown RBP28.72■■■□□ 2.19
Cpsf4-202ENSMUST00000160422 Robo2Q7TPD3 1470 aa28.72■■■□□ 2.19
Cpsf4-202ENSMUST00000160422 Usp54Q8BL06 1588 aaKnown RBP28.71■■■□□ 2.19
Cpsf4-202ENSMUST00000160422 Rprd2Q6NXI6 1469 aaKnown RBP28.7■■■□□ 2.18
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms