RNA–Protein interactions for RNA: ENSMUST00000138559.8

Ube4a-204, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 3,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-204ENSMUST00000138559 Ccnb3Q810T2 1396 aa11.46□□□□□ -0.57
Ube4a-204ENSMUST00000138559 Fam208aQ69ZR9 1610 aaKnown RBP11.45□□□□□ -0.58
Ube4a-204ENSMUST00000138559 UbtfP25976 765 aaKnown RBP11.45□□□□□ -0.58
Ube4a-204ENSMUST00000138559 Arid3cA6PWV5 409 aa11.44□□□□□ -0.58
Ube4a-204ENSMUST00000138559 Rnf17Q99MV7 1640 aa11.42□□□□□ -0.58
Ube4a-204ENSMUST00000138559 Adcy10Q8C0T9 1614 aa11.41□□□□□ -0.58
Ube4a-204ENSMUST00000138559 Clasp1Q80TV8 1535 aaKnown RBP11.41□□□□□ -0.58
Ube4a-204ENSMUST00000138559 A2mQ6GQT1 1474 aa11.4□□□□□ -0.58
Ube4a-204ENSMUST00000138559 Mlh3A0A1Y7VMP7 1443 aa11.4□□□□□ -0.58
Ube4a-204ENSMUST00000138559 Ppp1r18Q8BQ30 594 aa11.39□□□□□ -0.59
Ube4a-204ENSMUST00000138559 Arhgap5P97393 1501 aa11.39□□□□□ -0.59
Ube4a-204ENSMUST00000138559 Caskin1Q6P9K8 1431 aa11.38□□□□□ -0.59
Ube4a-204ENSMUST00000138559 Cdk11bP24788 784 aaKnown RBP11.37□□□□□ -0.59
Ube4a-204ENSMUST00000138559 Ttc37F8VPK0 1563 aa11.36□□□□□ -0.59
Ube4a-204ENSMUST00000138559 Arhgef40Q3UPH7 1517 aa11.36□□□□□ -0.59
Ube4a-204ENSMUST00000138559 Zfyve16Q80U44 1528 aa11.35□□□□□ -0.59
Ube4a-204ENSMUST00000138559 3425401B19RikD3Z1D3 1412 aa11.35□□□□□ -0.59
Ube4a-204ENSMUST00000138559 Cfap74Q3UY96 1578 aa11.35□□□□□ -0.59
Ube4a-204ENSMUST00000138559 Tdrd9Q14BI7 1383 aa11.35□□□□□ -0.59
Ube4a-204ENSMUST00000138559 Pdcd11Q6NS46 1862 aaKnown RBP11.34□□□□□ -0.59
Ube4a-204ENSMUST00000138559 Depdc5P61460 1591 aa11.34□□□□□ -0.59
Ube4a-204ENSMUST00000138559 Gm32742A0A1B0GT42 1604 aa11.33□□□□□ -0.6
Ube4a-204ENSMUST00000138559 AglF8VPN4 1532 aa11.33□□□□□ -0.6
Ube4a-204ENSMUST00000138559 Plekhh2Q8C115 1491 aa11.32□□□□□ -0.6
Ube4a-204ENSMUST00000138559 AdgbG3UZ78 1657 aa11.32□□□□□ -0.6
Ube4a-204ENSMUST00000138559 Kdm6bQ5NCY0 1641 aa11.32□□□□□ -0.6
Ube4a-204ENSMUST00000138559 Mtus2Q3UHD3 1353 aa11.31□□□□□ -0.6
Ube4a-204ENSMUST00000138559 Ncapd3Q6ZQK0 1506 aa11.31□□□□□ -0.6
Ube4a-204ENSMUST00000138559 Abca9Q8K449 1623 aa11.31□□□□□ -0.6
Ube4a-204ENSMUST00000138559 Abcc5Q9R1X5 1436 aa11.29□□□□□ -0.6
Ube4a-204ENSMUST00000138559 Abcc3B2RX12 1523 aa11.29□□□□□ -0.6
Ube4a-204ENSMUST00000138559 Fam50aQ9WV03 339 aaKnown RBP11.28□□□□□ -0.6
Ube4a-204ENSMUST00000138559 Trappc8E9PWG2 1437 aa11.28□□□□□ -0.6
Ube4a-204ENSMUST00000138559 Hecw1Q8K4P8 1604 aa11.28□□□□□ -0.6
Ube4a-204ENSMUST00000138559 Kidins220E9Q9B7 1793 aa11.28□□□□□ -0.6
Ube4a-204ENSMUST00000138559 UacaQ8CGB3 1411 aa11.26□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Naip2Q9QUK4 1447 aa11.25□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Lemd3Q9WU40 921 aa11.24□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Sart1Q9Z315 806 aaKnown RBP11.24□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Mia2Q91ZV0 1396 aa11.24□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Chic2Q9D9G3 165 aa11.23□□□□□ -0.61
Ube4a-204ENSMUST00000138559 OvosQ3UU35 1456 aa11.23□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Cabp1Q9JLK7 227 aa11.23□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Fmn2Q9JL04 1578 aa11.23□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Il16O54824 1322 aa11.23□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Cdc42bpbQ7TT50 1713 aa11.22□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Fndc1E9Q043 1732 aa11.22□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Kiaa0556Q8C753 1610 aa11.22□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Mast1Q9R1L5 1570 aa11.22□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Rfx7F8VPJ6 1459 aa11.22□□□□□ -0.61
Ube4a-204ENSMUST00000138559 SphkapQ6NSW3 1687 aa11.21□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Neurl4Q5NCX5 1563 aa11.21□□□□□ -0.61
Ube4a-204ENSMUST00000138559 Kdm3bQ6ZPY7 1562 aa11.21□□□□□ -0.62
Ube4a-204ENSMUST00000138559 NclP09405 707 aaKnown RBP11.2□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Fhad1A6PWD2 1420 aa11.2□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Mier1Q5UAK0 511 aa11.2□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Kdm5cP41230 1554 aa11.19□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Vps8Q0P5W1 1427 aa11.19□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Hecw2Q6I6G8 1578 aa11.18□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Pcdh10E9PXQ7 1057 aa11.18□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Synj2Q9D2G5 1434 aa11.18□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Adgrl2Q8JZZ7 1487 aa11.18□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Adgrb2Q8CGM1 1561 aa11.17□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Cul9Q80TT8 1865 aa11.17□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Atp10aO54827 1508 aa11.17□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Prdm16A2A935 1275 aa11.16□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Rrp7aQ9D1C9 280 aaKnown RBP11.16□□□□□ -0.62
Ube4a-204ENSMUST00000138559 Map3k5O35099 1380 aa11.14□□□□□ -0.63
Ube4a-204ENSMUST00000138559 RereQ80TZ9 1558 aa11.13□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Ube2uB1AUC4 352 aa11.13□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Dip2cE9PWR4 1557 aa11.13□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Ptch1Q61115 1434 aa11.12□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Xrn1P97789 1719 aaKnown RBP11.12□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Nos1Q9Z0J4 1429 aa11.11□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Abca17E9PX95 1733 aa11.11□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Fhod3Q76LL6 1578 aa11.1□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Cdc42bpgQ80UW5 1551 aa11.1□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Acin1Q9JIX8 1338 aaKnown RBP11.1□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Ccer2J3QPU5 274 aa11.09□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Ssh2Q5SW75 1423 aa11.09□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Spag9Q58A65 1321 aaKnown RBP11.09□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Kif14L0N7N1 1674 aaKnown RBP11.09□□□□□ -0.63
Ube4a-204ENSMUST00000138559 Znf518aB2RRF6 1478 aaKnown RBP11.08□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Dennd4bQ3U1Y4 1499 aa11.08□□□□□ -0.64
Ube4a-204ENSMUST00000138559 AlkP97793 1621 aa11.08□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Yeats2Q3TUF7 1407 aa11.08□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Plch2A2AP18 1501 aa11.07□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Clstn2Q9ER65 966 aa11.07□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Zmym4A2A791 1549 aaKnown RBP11.06□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Gli2Q0VGT2 1544 aa11.06□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Cfap65Q3V0B4 1847 aa11.06□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Usp54Q8BL06 1588 aaKnown RBP11.06□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Qser1A2BIE1 1698 aa11.05□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Trpm1Q2TV84 1622 aa11.05□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Nup155Q99P88 1391 aaKnown RBP11.05□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Kif1bQ60575 1816 aaKnown RBP11.05□□□□□ -0.64
Ube4a-204ENSMUST00000138559 NpatQ8BMA5 1420 aa11.04□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Kif3bQ61771 747 aa11.04□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Plppr3Q7TPB0 716 aa11.04□□□□□ -0.64
Ube4a-204ENSMUST00000138559 Trpm2Q91YD4 1506 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms