RNA–Protein interactions for RNA: ENSMUST00000115578.9

Ufd1-202, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ufd1, Length 2,078 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-202ENSMUST00000115578 Gapvd1Q6PAR5 1458 aa16.64■□□□□ 0.25
Ufd1-202ENSMUST00000115578 Naip2Q9QUK4 1447 aa16.63■□□□□ 0.25
Ufd1-202ENSMUST00000115578 Fkbp15Q6P9Q6 1216 aaKnown RBP16.61■□□□□ 0.25
Ufd1-202ENSMUST00000115578 Cep170Q6A065 1588 aa16.6■□□□□ 0.25
Ufd1-202ENSMUST00000115578 Pabpn1Q8CCS6 302 aaKnown RBP16.6■□□□□ 0.25
Ufd1-202ENSMUST00000115578 Pelp1Q9DBD5 1123 aaKnown RBP16.59■□□□□ 0.25
Ufd1-202ENSMUST00000115578 Abca8bQ8K440 1620 aa16.57■□□□□ 0.24
Ufd1-202ENSMUST00000115578 Wdr7Q920I9 1489 aa16.56■□□□□ 0.24
Ufd1-202ENSMUST00000115578 Znf608Q56A10 1511 aa16.55■□□□□ 0.24
Ufd1-202ENSMUST00000115578 Fhad1A6PWD2 1420 aa16.54■□□□□ 0.24
Ufd1-202ENSMUST00000115578 Abcc5Q9R1X5 1436 aa16.54■□□□□ 0.24
Ufd1-202ENSMUST00000115578 Rnf17Q99MV7 1640 aa16.54■□□□□ 0.24
Ufd1-202ENSMUST00000115578 Mlh3A0A1Y7VMP7 1443 aa16.54■□□□□ 0.24
Ufd1-202ENSMUST00000115578 Dennd4bQ3U1Y4 1499 aa16.53■□□□□ 0.24
Ufd1-202ENSMUST00000115578 Lrrc9Q8CDN9 1456 aa16.53■□□□□ 0.24
Ufd1-202ENSMUST00000115578 AI481877A2ALV5 1481 aa16.52■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Pdcd11Q6NS46 1862 aaKnown RBP16.52■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Vps8Q0P5W1 1427 aa16.52■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Gm32742A0A1B0GT42 1604 aa16.51■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Atp10dQ8K2X1 1416 aa16.5■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Mia2Q91ZV0 1396 aa16.5■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Caskin1Q6P9K8 1431 aa16.5■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Fam50aQ9WV03 339 aaKnown RBP16.5■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Aplp2Q06335 707 aa16.49■□□□□ 0.23
Ufd1-202ENSMUST00000115578 SphkapQ6NSW3 1687 aa16.49■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Igf1rQ60751 1373 aa16.49■□□□□ 0.23
Ufd1-202ENSMUST00000115578 UacaQ8CGB3 1411 aa16.48■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Plekhh2Q8C115 1491 aa16.48■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Bcl11aQ9QYE3 773 aa16.47■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Rfx7F8VPJ6 1459 aa16.47■□□□□ 0.23
Ufd1-202ENSMUST00000115578 1700123L14RikQ3V2K7 440 aa16.46■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Tdrd9Q14BI7 1383 aa16.46■□□□□ 0.23
Ufd1-202ENSMUST00000115578 Sall2Q9QX96 1004 aa16.46■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Kdm3bQ6ZPY7 1562 aa16.44■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Chic2Q9D9G3 165 aa16.43■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Cabp1Q9JLK7 227 aa16.42■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Arhgap5P97393 1501 aa16.42■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Setbp1Q9Z180 1582 aa16.42■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Gm156Q58A37 223 aa16.41■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Adgrb2Q8CGM1 1561 aa16.41■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Col17a1Q07563 1470 aa16.41■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Mtus2Q3UHD3 1353 aa16.4■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Ak9G3UYQ4 1894 aa16.4■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Fhod3Q76LL6 1578 aa16.4■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Abcc3B2RX12 1523 aa16.4■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Il16O54824 1322 aa16.4■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Trappc8E9PWG2 1437 aa16.39■□□□□ 0.22
Ufd1-202ENSMUST00000115578 Adgrl3Q80TS3 1537 aa16.39■□□□□ 0.21
Ufd1-202ENSMUST00000115578 Zfyve16Q80U44 1528 aa16.39■□□□□ 0.21
Ufd1-202ENSMUST00000115578 Cfap74Q3UY96 1578 aa16.39■□□□□ 0.21
Ufd1-202ENSMUST00000115578 Kidins220E9Q9B7 1793 aa16.38■□□□□ 0.21
Ufd1-202ENSMUST00000115578 Pprc1Q6NZN1 1644 aa16.36■□□□□ 0.21
Ufd1-202ENSMUST00000115578 Abca9Q8K449 1623 aa16.36■□□□□ 0.21
Ufd1-202ENSMUST00000115578 Fmn2Q9JL04 1578 aa16.36■□□□□ 0.21
Ufd1-202ENSMUST00000115578 Cdc42bpbQ7TT50 1713 aa16.36■□□□□ 0.21
Ufd1-202ENSMUST00000115578 Hecw1Q8K4P8 1604 aa16.35■□□□□ 0.21
Ufd1-202ENSMUST00000115578 Mast1Q9R1L5 1570 aa16.35■□□□□ 0.21
Ufd1-202ENSMUST00000115578 Cdk11bP24788 784 aaKnown RBP16.34■□□□□ 0.21
Ufd1-202ENSMUST00000115578 Ifnlr1Q8CGK5 535 aa16.34■□□□□ 0.21
Ufd1-202ENSMUST00000115578 AlkP97793 1621 aa16.33■□□□□ 0.2
Ufd1-202ENSMUST00000115578 Neurl4Q5NCX5 1563 aa16.32■□□□□ 0.2
Ufd1-202ENSMUST00000115578 Ankrd36D3Z4K0 1415 aa16.29■□□□□ 0.2
Ufd1-202ENSMUST00000115578 Arid3cA6PWV5 409 aa16.29■□□□□ 0.2
Ufd1-202ENSMUST00000115578 Adgrl2Q8JZZ7 1487 aa16.28■□□□□ 0.2
Ufd1-202ENSMUST00000115578 Eid3Q3V124 375 aa16.28■□□□□ 0.2
Ufd1-202ENSMUST00000115578 Kif21bQ9QXL1 1668 aa16.28■□□□□ 0.2
Ufd1-202ENSMUST00000115578 ClspnQ80YR7 1315 aa16.28■□□□□ 0.2
Ufd1-202ENSMUST00000115578 Ccer2J3QPU5 274 aa16.27■□□□□ 0.2
Ufd1-202ENSMUST00000115578 Lamc1P02468 1607 aaKnown RBP16.27■□□□□ 0.19
Ufd1-202ENSMUST00000115578 Zfp644E9QA22 1323 aa16.27■□□□□ 0.19
Ufd1-202ENSMUST00000115578 Csrnp3P59055 597 aa16.26■□□□□ 0.19
Ufd1-202ENSMUST00000115578 Trpm2Q91YD4 1506 aa16.26■□□□□ 0.19
Ufd1-202ENSMUST00000115578 Sart1Q9Z315 806 aaKnown RBP16.25■□□□□ 0.19
Ufd1-202ENSMUST00000115578 Clasp1Q80TV8 1535 aaKnown RBP16.24■□□□□ 0.19
Ufd1-202ENSMUST00000115578 Supt6hQ62383 1726 aaKnown RBP16.24■□□□□ 0.19
Ufd1-202ENSMUST00000115578 NclP09405 707 aaKnown RBP16.22■□□□□ 0.19
Ufd1-202ENSMUST00000115578 Xrn1P97789 1719 aaKnown RBP16.2■□□□□ 0.18
Ufd1-202ENSMUST00000115578 AglF8VPN4 1532 aa16.2■□□□□ 0.18
Ufd1-202ENSMUST00000115578 Nop58Q6DFW4 536 aaKnown RBP16.2■□□□□ 0.18
Ufd1-202ENSMUST00000115578 Ssh2Q5SW75 1423 aa16.2■□□□□ 0.18
Ufd1-202ENSMUST00000115578 Abca17E9PX95 1733 aa16.19■□□□□ 0.18
Ufd1-202ENSMUST00000115578 Ttc37F8VPK0 1563 aa16.19■□□□□ 0.18
Ufd1-202ENSMUST00000115578 TonslQ6NZL6 1363 aa16.19■□□□□ 0.18
Ufd1-202ENSMUST00000115578 Depdc5P61460 1591 aa16.19■□□□□ 0.18
Ufd1-202ENSMUST00000115578 Mphosph9A6H5Y1 991 aa16.18■□□□□ 0.18
Ufd1-202ENSMUST00000115578 Kdm5cP41230 1554 aa16.16■□□□□ 0.18
Ufd1-202ENSMUST00000115578 Asxl1P59598 1514 aa16.16■□□□□ 0.18
Ufd1-202ENSMUST00000115578 Kiaa0556Q8C753 1610 aa16.16■□□□□ 0.18
Ufd1-202ENSMUST00000115578 Amer1Q7TS75 1132 aa16.15■□□□□ 0.18
Ufd1-202ENSMUST00000115578 Rrp7aQ9D1C9 280 aaKnown RBP16.13■□□□□ 0.17
Ufd1-202ENSMUST00000115578 Map3k5O35099 1380 aa16.12■□□□□ 0.17
Ufd1-202ENSMUST00000115578 Ube2uB1AUC4 352 aa16.12■□□□□ 0.17
Ufd1-202ENSMUST00000115578 Nos1Q9Z0J4 1429 aa16.11■□□□□ 0.17
Ufd1-202ENSMUST00000115578 Ttll5Q8CHB8 1328 aa16.11■□□□□ 0.17
Ufd1-202ENSMUST00000115578 Cul9Q80TT8 1865 aa16.11■□□□□ 0.17
Ufd1-202ENSMUST00000115578 Prdm16A2A935 1275 aa16.1■□□□□ 0.17
Ufd1-202ENSMUST00000115578 Hspa5P20029 655 aaKnown RBP16.1■□□□□ 0.17
Ufd1-202ENSMUST00000115578 ShprhQ7TPQ3 1674 aa16.1■□□□□ 0.17
Ufd1-202ENSMUST00000115578 Usp54Q8BL06 1588 aaKnown RBP16.1■□□□□ 0.17
Ufd1-202ENSMUST00000115578 Nup155Q99P88 1391 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 65 ms