RNA–Protein interactions for RNA: ENSMUST00000068439.12

Pdlim1-201, Transcript of PDZ and LIM domain protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdlim1, Length 2,571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1-201ENSMUST00000068439 Ythdc2B2RR83 1445 aaKnown RBP23.04■■□□□ 1.28
Pdlim1-201ENSMUST00000068439 Pelp1Q9DBD5 1123 aaKnown RBP23.03■■□□□ 1.28
Pdlim1-201ENSMUST00000068439 Wdr7Q920I9 1489 aa23.03■■□□□ 1.28
Pdlim1-201ENSMUST00000068439 Pabpn1Q8CCS6 302 aaKnown RBP23.02■■□□□ 1.28
Pdlim1-201ENSMUST00000068439 Caskin1Q6P9K8 1431 aa23.02■■□□□ 1.28
Pdlim1-201ENSMUST00000068439 Rfx7F8VPJ6 1459 aa23.02■■□□□ 1.28
Pdlim1-201ENSMUST00000068439 Chic2Q9D9G3 165 aa23.01■■□□□ 1.27
Pdlim1-201ENSMUST00000068439 Gapvd1Q6PAR5 1458 aa23■■□□□ 1.27
Pdlim1-201ENSMUST00000068439 Ccer2J3QPU5 274 aa22.99■■□□□ 1.27
Pdlim1-201ENSMUST00000068439 Dennd4bQ3U1Y4 1499 aa22.98■■□□□ 1.27
Pdlim1-201ENSMUST00000068439 Mtus2Q3UHD3 1353 aa22.98■■□□□ 1.27
Pdlim1-201ENSMUST00000068439 Cdk11bP24788 784 aaKnown RBP22.97■■□□□ 1.27
Pdlim1-201ENSMUST00000068439 Igf1rQ60751 1373 aa22.97■■□□□ 1.27
Pdlim1-201ENSMUST00000068439 PtprtQ99M80 1454 aa22.96■■□□□ 1.27
Pdlim1-201ENSMUST00000068439 Cabp1Q9JLK7 227 aa22.96■■□□□ 1.27
Pdlim1-201ENSMUST00000068439 Il16O54824 1322 aa22.94■■□□□ 1.26
Pdlim1-201ENSMUST00000068439 Tdrd9Q14BI7 1383 aa22.94■■□□□ 1.26
Pdlim1-201ENSMUST00000068439 Rnf17Q99MV7 1640 aa22.93■■□□□ 1.26
Pdlim1-201ENSMUST00000068439 Abca8bQ8K440 1620 aa22.92■■□□□ 1.26
Pdlim1-201ENSMUST00000068439 Atp10dQ8K2X1 1416 aa22.91■■□□□ 1.26
Pdlim1-201ENSMUST00000068439 TonslQ6NZL6 1363 aa22.91■■□□□ 1.26
Pdlim1-201ENSMUST00000068439 Kdm3bQ6ZPY7 1562 aa22.9■■□□□ 1.26
Pdlim1-201ENSMUST00000068439 Cep170Q6A065 1588 aa22.89■■□□□ 1.26
Pdlim1-201ENSMUST00000068439 Ankrd36D3Z4K0 1415 aa22.89■■□□□ 1.25
Pdlim1-201ENSMUST00000068439 Fhod3Q76LL6 1578 aa22.88■■□□□ 1.25
Pdlim1-201ENSMUST00000068439 Eid3Q3V124 375 aa22.88■■□□□ 1.25
Pdlim1-201ENSMUST00000068439 SphkapQ6NSW3 1687 aa22.87■■□□□ 1.25
Pdlim1-201ENSMUST00000068439 AI481877A2ALV5 1481 aa22.87■■□□□ 1.25
Pdlim1-201ENSMUST00000068439 Arhgap5P97393 1501 aa22.87■■□□□ 1.25
Pdlim1-201ENSMUST00000068439 Las1lA2BE28 776 aaKnown RBP22.85■■□□□ 1.25
Pdlim1-201ENSMUST00000068439 NclP09405 707 aaKnown RBP22.85■■□□□ 1.25
Pdlim1-201ENSMUST00000068439 Gm32742A0A1B0GT42 1604 aa22.85■■□□□ 1.25
Pdlim1-201ENSMUST00000068439 Znf608Q56A10 1511 aa22.83■■□□□ 1.25
Pdlim1-201ENSMUST00000068439 Lrrc9Q8CDN9 1456 aa22.83■■□□□ 1.25
Pdlim1-201ENSMUST00000068439 Cfap74Q3UY96 1578 aa22.82■■□□□ 1.24
Pdlim1-201ENSMUST00000068439 Adgrb2Q8CGM1 1561 aa22.82■■□□□ 1.24
Pdlim1-201ENSMUST00000068439 Pdcd11Q6NS46 1862 aaKnown RBP22.8■■□□□ 1.24
Pdlim1-201ENSMUST00000068439 Ube2uB1AUC4 352 aa22.78■■□□□ 1.24
Pdlim1-201ENSMUST00000068439 Fmn2Q9JL04 1578 aa22.76■■□□□ 1.23
Pdlim1-201ENSMUST00000068439 Trappc8E9PWG2 1437 aa22.76■■□□□ 1.23
Pdlim1-201ENSMUST00000068439 Abcc3B2RX12 1523 aa22.74■■□□□ 1.23
Pdlim1-201ENSMUST00000068439 Ifnlr1Q8CGK5 535 aa22.74■■□□□ 1.23
Pdlim1-201ENSMUST00000068439 AlkP97793 1621 aa22.72■■□□□ 1.23
Pdlim1-201ENSMUST00000068439 Neurl4Q5NCX5 1563 aa22.71■■□□□ 1.23
Pdlim1-201ENSMUST00000068439 Mast1Q9R1L5 1570 aa22.71■■□□□ 1.23
Pdlim1-201ENSMUST00000068439 Setbp1Q9Z180 1582 aa22.71■■□□□ 1.23
Pdlim1-201ENSMUST00000068439 Gm156Q58A37 223 aa22.7■■□□□ 1.22
Pdlim1-201ENSMUST00000068439 Adgrl2Q8JZZ7 1487 aa22.7■■□□□ 1.22
Pdlim1-201ENSMUST00000068439 Hecw1Q8K4P8 1604 aa22.7■■□□□ 1.22
Pdlim1-201ENSMUST00000068439 Mphosph9A6H5Y1 991 aa22.69■■□□□ 1.22
Pdlim1-201ENSMUST00000068439 Zfyve16Q80U44 1528 aa22.68■■□□□ 1.22
Pdlim1-201ENSMUST00000068439 Zfp644E9QA22 1323 aa22.68■■□□□ 1.22
Pdlim1-201ENSMUST00000068439 Sart1Q9Z315 806 aaKnown RBP22.66■■□□□ 1.22
Pdlim1-201ENSMUST00000068439 Lamc1P02468 1607 aaKnown RBP22.66■■□□□ 1.22
Pdlim1-201ENSMUST00000068439 Adgrl3Q80TS3 1537 aa22.63■■□□□ 1.21
Pdlim1-201ENSMUST00000068439 Kidins220E9Q9B7 1793 aa22.63■■□□□ 1.21
Pdlim1-201ENSMUST00000068439 Arid3cA6PWV5 409 aa22.63■■□□□ 1.21
Pdlim1-201ENSMUST00000068439 Trpm2Q91YD4 1506 aa22.62■■□□□ 1.21
Pdlim1-201ENSMUST00000068439 Cdc42bpbQ7TT50 1713 aa22.61■■□□□ 1.21
Pdlim1-201ENSMUST00000068439 Hspa5P20029 655 aaKnown RBP22.61■■□□□ 1.21
Pdlim1-201ENSMUST00000068439 Kif21bQ9QXL1 1668 aa22.6■■□□□ 1.21
Pdlim1-201ENSMUST00000068439 Abca9Q8K449 1623 aa22.6■■□□□ 1.21
Pdlim1-201ENSMUST00000068439 Supt5hO55201 1082 aaKnown RBP22.57■■□□□ 1.2
Pdlim1-201ENSMUST00000068439 Rrp7aQ9D1C9 280 aaKnown RBP22.56■■□□□ 1.2
Pdlim1-201ENSMUST00000068439 Ak9G3UYQ4 1894 aa22.56■■□□□ 1.2
Pdlim1-201ENSMUST00000068439 Ssh2Q5SW75 1423 aa22.55■■□□□ 1.2
Pdlim1-201ENSMUST00000068439 Pcgf6Q99NA9 353 aa22.55■■□□□ 1.2
Pdlim1-201ENSMUST00000068439 Nup155Q99P88 1391 aaKnown RBP22.54■■□□□ 1.2
Pdlim1-201ENSMUST00000068439 Prdm16A2A935 1275 aa22.54■■□□□ 1.2
Pdlim1-201ENSMUST00000068439 Aebp2Q9Z248 504 aaKnown RBP22.54■■□□□ 1.2
Pdlim1-201ENSMUST00000068439 Col17a1Q07563 1470 aa22.53■■□□□ 1.2
Pdlim1-201ENSMUST00000068439 Ttll5Q8CHB8 1328 aa22.52■■□□□ 1.2
Pdlim1-201ENSMUST00000068439 Pkd2O35245 966 aa22.51■■□□□ 1.19
Pdlim1-201ENSMUST00000068439 Supt6hQ62383 1726 aaKnown RBP22.5■■□□□ 1.19
Pdlim1-201ENSMUST00000068439 Pprc1Q6NZN1 1644 aa22.49■■□□□ 1.19
Pdlim1-201ENSMUST00000068439 Naip5Q9R016 1403 aa22.48■■□□□ 1.19
Pdlim1-201ENSMUST00000068439 Map4P27546 1125 aaKnown RBP22.46■■□□□ 1.19
Pdlim1-201ENSMUST00000068439 Rprd2Q6NXI6 1469 aaKnown RBP22.46■■□□□ 1.19
Pdlim1-201ENSMUST00000068439 Clstn2Q9ER65 966 aa22.45■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 Wdr66E9Q743 1299 aa22.45■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 Pik3c2gO70167 1506 aa22.44■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 Lemd3Q9WU40 921 aa22.44■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 Map3k5O35099 1380 aa22.43■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 Clasp1Q80TV8 1535 aaKnown RBP22.43■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 Trak1Q6PD31 939 aa22.42■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 Usp47Q8BY87 1376 aa22.42■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 Spag9Q58A65 1321 aaKnown RBP22.42■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 Camsap2Q8C1B1 1461 aa22.41■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 PtprgQ05909 1442 aa22.41■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 Sall2Q9QX96 1004 aa22.41■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 Abca17E9PX95 1733 aa22.4■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 AglF8VPN4 1532 aa22.4■■□□□ 1.18
Pdlim1-201ENSMUST00000068439 Asxl1P59598 1514 aa22.39■■□□□ 1.17
Pdlim1-201ENSMUST00000068439 Nos1Q9Z0J4 1429 aa22.39■■□□□ 1.17
Pdlim1-201ENSMUST00000068439 Xrn1P97789 1719 aaKnown RBP22.38■■□□□ 1.17
Pdlim1-201ENSMUST00000068439 ClspnQ80YR7 1315 aa22.38■■□□□ 1.17
Pdlim1-201ENSMUST00000068439 Dhx9O70133 1380 aaKnown RBP22.38■■□□□ 1.17
Pdlim1-201ENSMUST00000068439 OvosQ3UU35 1456 aa22.37■■□□□ 1.17
Pdlim1-201ENSMUST00000068439 DroshaQ5HZJ0 1373 aaKnown RBP22.36■■□□□ 1.17
Pdlim1-201ENSMUST00000068439 Kdm5cP41230 1554 aa22.36■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms