RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C GBP2P25555 427 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
PTA1YAL043C CMK1P27466 446 aaKnown RBP3.99□□□□□ -1.77
PTA1YAL043C IDH2P28241 369 aaKnown RBP3.99□□□□□ -1.77
PTA1YAL043C ARO7P32178 256 aa3.99□□□□□ -1.77
PTA1YAL043C MET22P32179 357 aa3.99□□□□□ -1.77
PTA1YAL043C RIM1P32445 135 aaKnown RBP3.99□□□□□ -1.77
PTA1YAL043C MRT4P33201 236 aaKnown RBP3.99□□□□□ -1.77
PTA1YAL043C ADD66P36040 267 aa3.99□□□□□ -1.77
PTA1YAL043C ATG14P38270 344 aa3.99□□□□□ -1.77
PTA1YAL043C MUP3P38734 546 aa3.99□□□□□ -1.77
PTA1YAL043C HSE1P38753 452 aa3.99□□□□□ -1.77
PTA1YAL043C PEX18P38855 283 aa3.99□□□□□ -1.77
PTA1YAL043C EGD2P38879 174 aaKnown RBP3.99□□□□□ -1.77
PTA1YAL043C ALG8P40351 577 aa3.99□□□□□ -1.77
PTA1YAL043C VHR1P40522 640 aa3.99□□□□□ -1.77
PTA1YAL043C IMA5P40884 581 aa3.99□□□□□ -1.77
PTA1YAL043C SNF12P53628 566 aa3.99□□□□□ -1.77
PTA1YAL043C ASI1P54074 624 aa3.99□□□□□ -1.77
PTA1YAL043C PET117Q02771 107 aa3.99□□□□□ -1.77
PTA1YAL043C PPN1Q04119 674 aa3.99□□□□□ -1.77
PTA1YAL043C RCO1Q04779 684 aa3.99□□□□□ -1.77
PTA1YAL043C YDL073WQ07454 984 aa3.99□□□□□ -1.77
PTA1YAL043C NTG2Q08214 380 aa3.99□□□□□ -1.77
PTA1YAL043C PFK27Q12471 397 aaPredicted RBP3.99□□□□□ -1.77
PTA1YAL043C CCP1P00431 361 aa3.99□□□□□ -1.77
PTA1YAL043C ATP6P00854 259 aa3.99□□□□□ -1.77
PTA1YAL043C CDC21P06785 304 aa3.99□□□□□ -1.77
PTA1YAL043C FBA1P14540 359 aaKnown RBP3.99□□□□□ -1.77
PTA1YAL043C PDE1P22434 369 aa3.99□□□□□ -1.77
PTA1YAL043C ATP7P30902 174 aa3.99□□□□□ -1.77
PTA1YAL043C SKG1P36169 355 aa3.99□□□□□ -1.77
PTA1YAL043C APE3P37302 537 aaKnown RBP3.99□□□□□ -1.77
PTA1YAL043C AHP1P38013 176 aaKnown RBP3.99□□□□□ -1.77
PTA1YAL043C GRS1P38088 690 aaKnown RBP3.99□□□□□ -1.77
PTA1YAL043C POL12P38121 705 aaPredicted RBP3.99□□□□□ -1.77
PTA1YAL043C ROT2P38138 954 aa3.99□□□□□ -1.77
PTA1YAL043C DUN1P39009 513 aa3.99□□□□□ -1.77
PTA1YAL043C ACO2P39533 789 aa3.99□□□□□ -1.77
PTA1YAL043C COG3P40094 801 aa3.99□□□□□ -1.77
PTA1YAL043C ELO3P40319 345 aa3.99□□□□□ -1.77
PTA1YAL043C YJR061WP40355 935 aa3.99□□□□□ -1.77
PTA1YAL043C YIR016WP40572 265 aa3.99□□□□□ -1.77
PTA1YAL043C NUP85P46673 744 aa3.99□□□□□ -1.77
PTA1YAL043C STB2P46679 850 aa3.99□□□□□ -1.77
PTA1YAL043C DIE2P50076 525 aa3.99□□□□□ -1.77
PTA1YAL043C AMA1P50082 593 aa3.99□□□□□ -1.77
PTA1YAL043C PLP1Q04004 230 aa3.99□□□□□ -1.77
PTA1YAL043C SPO20Q04359 397 aa3.99□□□□□ -1.77
PTA1YAL043C RNH1Q04740 348 aa3.99□□□□□ -1.77
PTA1YAL043C YOR387CQ08910 206 aa3.99□□□□□ -1.77
PTA1YAL043C NSL1Q12143 216 aa3.99□□□□□ -1.77
PTA1YAL043C THR1P17423 357 aaKnown RBP3.98□□□□□ -1.77
PTA1YAL043C RPL24BP24000 155 aaKnown RBP3.98□□□□□ -1.77
PTA1YAL043C PUP3P25451 205 aaKnown RBP3.98□□□□□ -1.77
PTA1YAL043C PPZ1P26570 692 aa3.98□□□□□ -1.77
PTA1YAL043C CRM1P30822 1084 aaKnown RBP3.98□□□□□ -1.77
PTA1YAL043C LYP1P32487 611 aa3.98□□□□□ -1.77
PTA1YAL043C APM3P38153 483 aa3.98□□□□□ -1.77
PTA1YAL043C YBR259WP38338 688 aa3.98□□□□□ -1.77
PTA1YAL043C RBG1P39729 369 aa3.98□□□□□ -1.77
PTA1YAL043C AFG3P39925 761 aa3.98□□□□□ -1.77
PTA1YAL043C MIT1P40002 666 aa3.98□□□□□ -1.77
PTA1YAL043C ESL1P40456 1118 aa3.98□□□□□ -1.77
PTA1YAL043C FKH2P41813 862 aa3.98□□□□□ -1.77
PTA1YAL043C YGL176CP46945 554 aa3.98□□□□□ -1.77
PTA1YAL043C PRP24P49960 444 aaKnown RBP3.98□□□□□ -1.77
PTA1YAL043C FRE4P53746 719 aa3.98□□□□□ -1.77
PTA1YAL043C SLM2P53955 656 aa3.98□□□□□ -1.77
PTA1YAL043C SPR6Q01684 191 aa3.98□□□□□ -1.77
PTA1YAL043C RSC4Q02206 625 aa3.98□□□□□ -1.77
PTA1YAL043C YPL062WQ02781 134 aa3.98□□□□□ -1.77
PTA1YAL043C MAK3Q03503 176 aa3.98□□□□□ -1.77
PTA1YAL043C HER2Q03557 464 aa3.98□□□□□ -1.77
PTA1YAL043C INP2Q03824 705 aa3.98□□□□□ -1.77
PTA1YAL043C GPI17Q04080 534 aa3.98□□□□□ -1.77
PTA1YAL043C SSL1Q04673 461 aaPredicted RBP3.98□□□□□ -1.77
PTA1YAL043C BSC2Q05611 235 aa3.98□□□□□ -1.77
PTA1YAL043C VAM6Q07468 1049 aa3.98□□□□□ -1.77
PTA1YAL043C PUS7Q08647 676 aaKnown RBP3.98□□□□□ -1.77
PTA1YAL043C HRK1Q08732 759 aaKnown RBP3.98□□□□□ -1.77
PTA1YAL043C GPB1Q08886 897 aa3.98□□□□□ -1.77
PTA1YAL043C RMD5Q12508 421 aa3.98□□□□□ -1.77
PTA1YAL043C SRF1Q12516 437 aa3.98□□□□□ -1.77
PTA1YAL043C YKL018C-AQ3E7A7 99 aa3.98□□□□□ -1.77
PTA1YAL043C YLR149CQ99296 730 aa3.98□□□□□ -1.77
PTA1YAL043C MF(ALPHA)1P01149 165 aa3.98□□□□□ -1.77
PTA1YAL043C RPS9BP05755 195 aaKnown RBP3.98□□□□□ -1.77
PTA1YAL043C RAD7P06779 565 aa3.98□□□□□ -1.77
PTA1YAL043C MAS1P10507 462 aa3.98□□□□□ -1.77
PTA1YAL043C ARF2P19146 181 aaKnown RBP3.98□□□□□ -1.77
PTA1YAL043C CMK2P22517 447 aa3.98□□□□□ -1.77
PTA1YAL043C ADK2P26364 225 aa3.98□□□□□ -1.77
PTA1YAL043C GSH1P32477 678 aa3.98□□□□□ -1.77
PTA1YAL043C PAH1P32567 862 aa3.98□□□□□ -1.77
PTA1YAL043C SRP101P32916 621 aa3.98□□□□□ -1.77
PTA1YAL043C CSE1P33307 960 aa3.98□□□□□ -1.77
PTA1YAL043C NTR2P36118 322 aaPredicted RBP3.98□□□□□ -1.77
PTA1YAL043C MAK5P38112 773 aaPredicted RBP3.98□□□□□ -1.77
PTA1YAL043C SPF1P39986 1215 aaKnown RBP3.98□□□□□ -1.77
PTA1YAL043C ALD5P40047 520 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms