RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 AIFM3Q96NN9 605 aa14.83□□□□□ -0.04
PHGDH-218ENST00000641491 MAF1Q9H063 256 aa14.83□□□□□ -0.04
PHGDH-218ENST00000641491 RIC8AQ9NPQ8 531 aa14.83□□□□□ -0.04
PHGDH-218ENST00000641491 MAP3K20Q9NYL2 800 aaKnown RBP14.83□□□□□ -0.04
PHGDH-218ENST00000641491 RBPJLQ9UBG7 517 aa14.83□□□□□ -0.04
PHGDH-218ENST00000641491 CIZ1Q9ULV3 898 aaPredicted RBP14.83□□□□□ -0.04
PHGDH-218ENST00000641491 PTPRFP10586 1907 aa14.82□□□□□ -0.04
PHGDH-218ENST00000641491 ECM2O94769 699 aaPredicted RBP14.82□□□□□ -0.04
PHGDH-218ENST00000641491 TBC1D8O95759 1140 aa14.82□□□□□ -0.04
PHGDH-218ENST00000641491 SYT1P21579 422 aa14.82□□□□□ -0.04
PHGDH-218ENST00000641491 HOXD10P28358 340 aa14.82□□□□□ -0.04
PHGDH-218ENST00000641491 AP3B2Q13367 1082 aa14.82□□□□□ -0.04
PHGDH-218ENST00000641491 SLC35G1Q2M3R5 365 aa14.82□□□□□ -0.04
PHGDH-218ENST00000641491 PLEKHH3Q7Z736 793 aa14.82□□□□□ -0.04
PHGDH-218ENST00000641491 FCHSD1Q86WN1 690 aa14.82□□□□□ -0.04
PHGDH-218ENST00000641491 REPS2Q8NFH8 660 aa14.82□□□□□ -0.04
PHGDH-218ENST00000641491 PHF20Q9BVI0 1012 aa14.82□□□□□ -0.04
PHGDH-218ENST00000641491 ZMYND12Q9H0C1 365 aa14.82□□□□□ -0.04
PHGDH-218ENST00000641491 ADD3Q9UEY8 706 aaKnown RBP14.82□□□□□ -0.04
PHGDH-218ENST00000641491 ZNF536O15090 1300 aa14.82□□□□□ -0.04
PHGDH-218ENST00000641491 POTEB2H3BUK9 544 aa14.81□□□□□ -0.04
PHGDH-218ENST00000641491 STRNO43815 780 aa14.81□□□□□ -0.04
PHGDH-218ENST00000641491 PPP1R11O60927 126 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-218ENST00000641491 CNMDO75829 334 aa14.81□□□□□ -0.04
PHGDH-218ENST00000641491 SP3Q02447 781 aa14.81□□□□□ -0.04
PHGDH-218ENST00000641491 FOXD4L5Q5VV16 416 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-218ENST00000641491 ARHGEF16Q5VV41 709 aa14.81□□□□□ -0.04
PHGDH-218ENST00000641491 BRAPQ7Z569 592 aa14.81□□□□□ -0.04
PHGDH-218ENST00000641491 DPP9Q86TI2 863 aa14.81□□□□□ -0.04
PHGDH-218ENST00000641491 DAGLBQ8NCG7 672 aa14.81□□□□□ -0.04
PHGDH-218ENST00000641491 SOCS4Q8WXH5 440 aa14.81□□□□□ -0.04
PHGDH-218ENST00000641491 FOXD4L4Q8WXT5 416 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-218ENST00000641491 ERO1AQ96HE7 468 aa14.81□□□□□ -0.04
PHGDH-218ENST00000641491 NAP1L4Q99733 375 aaKnown RBP14.81□□□□□ -0.04
PHGDH-218ENST00000641491 FOXP1Q9H334 677 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-218ENST00000641491 ZSCAN16Q9H4T2 348 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-218ENST00000641491 TXNRD2Q9NNW7 524 aa14.81□□□□□ -0.04
PHGDH-218ENST00000641491 CHMP5Q9NZZ3 219 aa14.81□□□□□ -0.04
PHGDH-218ENST00000641491 NFIBO00712 420 aa14.8□□□□□ -0.04
PHGDH-218ENST00000641491 BCRP11274 1271 aa14.8□□□□□ -0.04
PHGDH-218ENST00000641491 ZNF76P36508 570 aa14.8□□□□□ -0.04
PHGDH-218ENST00000641491 NONOQ15233 471 aaKnown RBP eCLIP14.8□□□□□ -0.04
PHGDH-218ENST00000641491 JAKMIP3Q5VZ66 844 aa14.8□□□□□ -0.04
PHGDH-218ENST00000641491 C17orf99Q6UX52 265 aa14.8□□□□□ -0.04
PHGDH-218ENST00000641491 EFCC1Q9HA90 598 aa14.8□□□□□ -0.04
PHGDH-218ENST00000641491 BIN2Q9UBW5 565 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-218ENST00000641491 MARCH6O60337 910 aa14.79□□□□□ -0.04
PHGDH-218ENST00000641491 FKTNO75072 461 aa14.79□□□□□ -0.04
PHGDH-218ENST00000641491 ZSCAN22P10073 491 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-218ENST00000641491 TAL1P17542 331 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-218ENST00000641491 HOXA13P31271 388 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-218ENST00000641491 UBE2SQ16763 222 aa14.79□□□□□ -0.04
PHGDH-218ENST00000641491 MUM1L1Q5H9M0 696 aa14.79□□□□□ -0.04
PHGDH-218ENST00000641491 GPR142Q7Z601 462 aa14.79□□□□□ -0.04
PHGDH-218ENST00000641491 ABRAQ8N0Z2 381 aa14.79□□□□□ -0.04
PHGDH-218ENST00000641491 NUDT12Q9BQG2 462 aa14.79□□□□□ -0.04
PHGDH-218ENST00000641491 CFHR5Q9BXR6 569 aa14.79□□□□□ -0.04
PHGDH-218ENST00000641491 SLC15A5A6NIM6 579 aa14.78□□□□□ -0.04
PHGDH-218ENST00000641491 PIK3CDO00329 1044 aa14.78□□□□□ -0.04
PHGDH-218ENST00000641491 NCLP19338 710 aaKnown RBP14.78□□□□□ -0.04
PHGDH-218ENST00000641491 RGS2P41220 211 aa14.78□□□□□ -0.04
PHGDH-218ENST00000641491 PSMC4P43686 418 aa14.78□□□□□ -0.04
PHGDH-218ENST00000641491 RPS6P62753 249 aaKnown RBP14.78□□□□□ -0.04
PHGDH-218ENST00000641491 BAATQ14032 418 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-218ENST00000641491 Q3C1V9 767 aa14.78□□□□□ -0.04
PHGDH-218ENST00000641491 USP17L6PQ6QN14 398 aa14.78□□□□□ -0.04
PHGDH-218ENST00000641491 PIK3AP1Q6ZUJ8 805 aa14.78□□□□□ -0.04
PHGDH-218ENST00000641491 FERMT3Q86UX7 667 aa14.78□□□□□ -0.04
PHGDH-218ENST00000641491 NOSTRINQ8IVI9 506 aa14.78□□□□□ -0.04
PHGDH-218ENST00000641491 NSUN6Q8TEA1 469 aaKnown RBP14.78□□□□□ -0.04
PHGDH-218ENST00000641491 ZNF396Q96N95 335 aaPredicted RBP14.78□□□□□ -0.04
PHGDH-218ENST00000641491 ANO3Q9BYT9 981 aa14.78□□□□□ -0.04
PHGDH-218ENST00000641491 PORCNQ9H237 461 aa14.78□□□□□ -0.04
PHGDH-218ENST00000641491 A1CFQ9NQ94 594 aaKnown RBP14.78□□□□□ -0.04
PHGDH-218ENST00000641491 TCEAL9Q9UHQ7 104 aa14.78□□□□□ -0.04
PHGDH-218ENST00000641491 RIPK3Q9Y572 518 aa14.78□□□□□ -0.04
PHGDH-218ENST00000641491 ADGRA2Q96PE1 1338 aa14.77□□□□□ -0.04
PHGDH-218ENST00000641491 BTBD18B2RXH4 712 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 GPR25O00155 361 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 PEX10O60683 326 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 ADORA2AP29274 412 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 CCND2P30279 289 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 LACTBP83111 547 aaPredicted RBP14.77□□□□□ -0.05
PHGDH-218ENST00000641491 PDE4DQ08499 809 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 HABP4Q5JVS0 413 aaKnown RBP14.77□□□□□ -0.05
PHGDH-218ENST00000641491 TYW1BQ6NUM6 668 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 SLC30A10Q6XR72 485 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 CLEC4DQ8WXI8 215 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 RMDN3Q96TC7 470 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 GJB4Q9NTQ9 266 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 CYP39A1Q9NYL5 469 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 PCDHA6Q9UN73 950 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 CEP131Q9UPN4 1083 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 PCDHA8Q9Y5H6 950 aa14.77□□□□□ -0.05
PHGDH-218ENST00000641491 A0A0G2JMZ2 1700 aa14.76□□□□□ -0.05
PHGDH-218ENST00000641491 ASB14A6NK59 587 aa14.76□□□□□ -0.05
PHGDH-218ENST00000641491 F13A1P00488 732 aa14.76□□□□□ -0.05
PHGDH-218ENST00000641491 GNRH1P01148 92 aa14.76□□□□□ -0.05
PHGDH-218ENST00000641491 ATP2B1P20020 1258 aa14.76□□□□□ -0.05
PHGDH-218ENST00000641491 PTPREP23469 700 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms