RNA–Protein interactions for RNA: ENST00000624304.3

SMIM11B-205, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-205ENST00000624304 FTOQ9C0B1 505 aaKnown RBP eCLIP23.6■■□□□ 1.37
SMIM11B-205ENST00000624304 RANBP17Q9H2T7 1088 aaKnown RBP23.6■■□□□ 1.37
SMIM11B-205ENST00000624304 SH3GLB2Q9NR46 395 aa23.6■■□□□ 1.37
SMIM11B-205ENST00000624304 SMCO2A6NFE2 343 aa23.59■■□□□ 1.37
SMIM11B-205ENST00000624304 CXCL11O14625 94 aa23.59■■□□□ 1.37
SMIM11B-205ENST00000624304 KINO60870 393 aaKnown RBP23.59■■□□□ 1.37
SMIM11B-205ENST00000624304 U2AF2P26368 475 aaKnown RBP eCLIP23.59■■□□□ 1.37
SMIM11B-205ENST00000624304 CEP135Q66GS9 1140 aa23.59■■□□□ 1.37
SMIM11B-205ENST00000624304 ATG4CQ96DT6 458 aa23.59■■□□□ 1.37
SMIM11B-205ENST00000624304 NAT10Q9H0A0 1025 aaKnown RBP23.59■■□□□ 1.37
SMIM11B-205ENST00000624304 PPP1R9AQ9ULJ8 1098 aa23.59■■□□□ 1.37
SMIM11B-205ENST00000624304 KIF2AO00139 706 aaPredicted RBP23.58■■□□□ 1.37
SMIM11B-205ENST00000624304 FAM160A1Q05DH4 1040 aa23.58■■□□□ 1.37
SMIM11B-205ENST00000624304 CCDC144BQ3MJ40 725 aa23.58■■□□□ 1.37
SMIM11B-205ENST00000624304 ZNF784Q8NCA9 323 aaPredicted RBP23.58■■□□□ 1.37
SMIM11B-205ENST00000624304 PCDHA1Q9Y5I3 950 aa23.58■■□□□ 1.37
SMIM11B-205ENST00000624304 ZNF536O15090 1300 aa23.58■■□□□ 1.36
SMIM11B-205ENST00000624304 PEX10O60683 326 aa23.58■■□□□ 1.36
SMIM11B-205ENST00000624304 FBXO11Q86XK2 927 aa23.58■■□□□ 1.36
SMIM11B-205ENST00000624304 BECN2A8MW95 431 aa23.57■■□□□ 1.36
SMIM11B-205ENST00000624304 KRT2P35908 639 aa23.57■■□□□ 1.36
SMIM11B-205ENST00000624304 GSDMDP57764 484 aa23.57■■□□□ 1.36
SMIM11B-205ENST00000624304 GNL2Q13823 731 aaKnown RBP23.57■■□□□ 1.36
SMIM11B-205ENST00000624304 POTEEQ6S8J3 1075 aa23.57■■□□□ 1.36
SMIM11B-205ENST00000624304 SMC1BQ8NDV3 1235 aa23.57■■□□□ 1.36
SMIM11B-205ENST00000624304 ENGASEQ8NFI3 743 aa23.57■■□□□ 1.36
SMIM11B-205ENST00000624304 AGBL1Q96MI9 1066 aa23.57■■□□□ 1.36
SMIM11B-205ENST00000624304 ZMYND12Q9H0C1 365 aa23.57■■□□□ 1.36
SMIM11B-205ENST00000624304 SAFBQ15424 915 aaKnown RBP eCLIP23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 C11orf57Q6ZUT1 292 aaPredicted RBP23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 SAPCD2Q86UD0 394 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 CEP57L1Q8IYX8 460 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 BLIDQ8IZY5 108 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 CPXCR1Q8N123 301 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 RGS22Q8NE09 1264 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 TNFRSF25Q93038 417 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 AMNQ9BXJ7 453 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 PCDHA4Q9UN74 947 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 UNCXA6NJT0 531 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 USP17L15C9J2P7 530 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 USP17L13C9JLJ4 530 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 USP17L11C9JVI0 530 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 USP17L18D6R9N7 530 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 USP17L22D6RA61 530 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 USP17L17D6RBQ6 530 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 USP17L19D6RCP7 530 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 USP17L20D6RJB6 530 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 M0R2N6 131 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 DSG3P32926 999 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 CEBPZQ03701 1054 aaKnown RBP23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 USP17L24Q0WX57 530 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 SNW1Q13573 536 aaKnown RBP23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 MS4A4AQ96JQ5 239 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 FOXP1Q9H334 677 aaPredicted RBP23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 RAVER2Q9HCJ3 691 aaKnown RBP23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 IMPACTQ9P2X3 320 aa23.56■■□□□ 1.36
SMIM11B-205ENST00000624304 TOMM70O94826 608 aa23.55■■□□□ 1.36
SMIM11B-205ENST00000624304 COG2Q14746 738 aa23.55■■□□□ 1.36
SMIM11B-205ENST00000624304 GPAT2Q6NUI2 795 aa23.55■■□□□ 1.36
SMIM11B-205ENST00000624304 NYAP1Q6ZVC0 841 aa23.55■■□□□ 1.36
SMIM11B-205ENST00000624304 NOSTRINQ8IVI9 506 aa23.55■■□□□ 1.36
SMIM11B-205ENST00000624304 CCDC148Q8NFR7 591 aa23.55■■□□□ 1.36
SMIM11B-205ENST00000624304 SLC38A10Q9HBR0 1119 aa23.55■■□□□ 1.36
SMIM11B-205ENST00000624304 PCDHA6Q9UN73 950 aa23.55■■□□□ 1.36
SMIM11B-205ENST00000624304 PCDHA8Q9Y5H6 950 aa23.55■■□□□ 1.36
SMIM11B-205ENST00000624304 MYH7BA7E2Y1 1941 aa23.55■■□□□ 1.36
SMIM11B-205ENST00000624304 A0A1W2PQ27 194 aa23.54■■□□□ 1.36
SMIM11B-205ENST00000624304 A0A1W2PQ64 194 aa23.54■■□□□ 1.36
SMIM11B-205ENST00000624304 A0A1W2PQD8 194 aa23.54■■□□□ 1.36
SMIM11B-205ENST00000624304 VWA5AO00534 786 aa23.54■■□□□ 1.36
SMIM11B-205ENST00000624304 OPLAHO14841 1288 aa23.54■■□□□ 1.36
SMIM11B-205ENST00000624304 MYSM1Q5VVJ2 828 aa23.54■■□□□ 1.36
SMIM11B-205ENST00000624304 SPRYD7Q5W111 196 aa23.54■■□□□ 1.36
SMIM11B-205ENST00000624304 PROCA1Q8NCQ7 364 aaPredicted RBP23.54■■□□□ 1.36
SMIM11B-205ENST00000624304 BPIFA3Q9BQP9 254 aa23.54■■□□□ 1.36
SMIM11B-205ENST00000624304 TMEM260Q9NX78 707 aa23.54■■□□□ 1.36
SMIM11B-205ENST00000624304 BIN2Q9UBW5 565 aaPredicted RBP23.54■■□□□ 1.36
SMIM11B-205ENST00000624304 SNAPC2Q13487 334 aa23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 PTPN14Q15678 1187 aa23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 UBE2SQ16763 222 aa23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 DHX40Q8IX18 779 aaKnown RBP23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 TBC1D5Q92609 795 aa23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 SPDYE16A6NNV3 312 aaPredicted RBP23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 hCG_1984214I3L0E3 225 aa23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 WNT7AO00755 349 aa23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 TOB1P50616 345 aaPredicted RBP23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 BRAPQ7Z569 592 aa23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 ZNF713Q8N859 430 aaPredicted RBP23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 USP28Q96RU2 1077 aa23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 P2RX7Q99572 595 aaKnown RBP23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 GOLPH3LQ9H4A5 285 aa23.53■■□□□ 1.36
SMIM11B-205ENST00000624304 TUBB4AP04350 444 aa23.52■■□□□ 1.36
SMIM11B-205ENST00000624304 SKILP12757 684 aa23.52■■□□□ 1.36
SMIM11B-205ENST00000624304 CALML3P27482 149 aa23.52■■□□□ 1.36
SMIM11B-205ENST00000624304 ZNF157P51786 506 aaPredicted RBP23.52■■□□□ 1.36
SMIM11B-205ENST00000624304 GABPB1Q06547 395 aaPredicted RBP23.52■■□□□ 1.36
SMIM11B-205ENST00000624304 USP17L6PQ6QN14 398 aa23.52■■□□□ 1.36
SMIM11B-205ENST00000624304 PIK3AP1Q6ZUJ8 805 aa23.52■■□□□ 1.36
SMIM11B-205ENST00000624304 REPS2Q8NFH8 660 aa23.52■■□□□ 1.36
SMIM11B-205ENST00000624304 CCDC12Q8WUD4 166 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms