RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 E4F1Q66K89 784 aaPredicted RBP7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 SYDE1Q6ZW31 735 aaPredicted RBP7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 FRS2Q8WU20 508 aa7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 CCDC113Q9H0I3 377 aa7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 GPRC5CQ9NQ84 441 aa7.86□□□□□ -1.15
SCAMP1-205ENST00000614488 NPHS1O60500 1241 aa7.85□□□□□ -1.15
SCAMP1-205ENST00000614488 TSPAN15O95858 294 aa7.85□□□□□ -1.15
SCAMP1-205ENST00000614488 GFRA1P56159 465 aa7.85□□□□□ -1.15
SCAMP1-205ENST00000614488 TESK1Q15569 626 aa7.85□□□□□ -1.15
SCAMP1-205ENST00000614488 PKN1Q16512 942 aa7.85□□□□□ -1.15
SCAMP1-205ENST00000614488 ACBD5Q5T8D3 534 aaPredicted RBP7.85□□□□□ -1.15
SCAMP1-205ENST00000614488 IQCEQ6IPM2 695 aa7.85□□□□□ -1.15
SCAMP1-205ENST00000614488 CPNE8Q86YQ8 564 aa7.85□□□□□ -1.15
SCAMP1-205ENST00000614488 MCOLN1Q9GZU1 580 aa7.85□□□□□ -1.15
SCAMP1-205ENST00000614488 TEX51A0A1B0GUA7 166 aa7.84□□□□□ -1.15
SCAMP1-205ENST00000614488 MYOCOSA0A1B0GUC4 107 aa7.84□□□□□ -1.15
SCAMP1-205ENST00000614488 A0A1W2PQJ5 194 aa7.84□□□□□ -1.15
SCAMP1-205ENST00000614488 PDPK1O15530 556 aa7.84□□□□□ -1.15
SCAMP1-205ENST00000614488 MED14OSP0DP75 135 aa7.84□□□□□ -1.15
SCAMP1-205ENST00000614488 GLDCP23378 1020 aa7.84□□□□□ -1.15
SCAMP1-205ENST00000614488 KCNAB2Q13303 367 aa7.84□□□□□ -1.15
SCAMP1-205ENST00000614488 HSP90AA2PQ14568 343 aaPredicted RBP7.84□□□□□ -1.15
SCAMP1-205ENST00000614488 CBX2Q14781 532 aaPredicted RBP7.84□□□□□ -1.15
SCAMP1-205ENST00000614488 NR1I3Q14994 352 aa7.84□□□□□ -1.15
SCAMP1-205ENST00000614488 LRP10Q7Z4F1 713 aa7.84□□□□□ -1.15
SCAMP1-205ENST00000614488 LRRC47Q8N1G4 583 aaKnown RBP7.84□□□□□ -1.15
SCAMP1-205ENST00000614488 KREMEN2Q8NCW0 462 aa7.84□□□□□ -1.15
SCAMP1-205ENST00000614488 C7orf72A4D263 438 aa7.83□□□□□ -1.16
SCAMP1-205ENST00000614488 CYBBP04839 570 aa7.83□□□□□ -1.16
SCAMP1-205ENST00000614488 DBHP09172 617 aa7.83□□□□□ -1.16
SCAMP1-205ENST00000614488 SDHBP21912 280 aa7.83□□□□□ -1.16
SCAMP1-205ENST00000614488 ECI1P42126 302 aa7.83□□□□□ -1.16
SCAMP1-205ENST00000614488 MAP4K2Q12851 820 aa7.83□□□□□ -1.16
SCAMP1-205ENST00000614488 RAB3GAP1Q15042 981 aa7.83□□□□□ -1.16
SCAMP1-205ENST00000614488 MBLAC2Q68D91 279 aa7.83□□□□□ -1.16
SCAMP1-205ENST00000614488 BICRALQ6AI39 1079 aa7.83□□□□□ -1.16
SCAMP1-205ENST00000614488 LZTR1Q8N653 840 aa7.83□□□□□ -1.16
SCAMP1-205ENST00000614488 AARSD1Q9BTE6 412 aaKnown RBP7.83□□□□□ -1.16
SCAMP1-205ENST00000614488 KCNK12Q9HB15 430 aa7.83□□□□□ -1.16
SCAMP1-205ENST00000614488 KLHL14Q9P2G3 628 aa7.83□□□□□ -1.16
SCAMP1-205ENST00000614488 NFIBO00712 420 aa7.82□□□□□ -1.16
SCAMP1-205ENST00000614488 MEFVO15553 781 aaPredicted RBP7.82□□□□□ -1.16
SCAMP1-205ENST00000614488 YBX3P16989 372 aaKnown RBP eCLIP7.82□□□□□ -1.16
SCAMP1-205ENST00000614488 KCNJ6P48051 423 aa7.82□□□□□ -1.16
SCAMP1-205ENST00000614488 SLC35F1Q5T1Q4 408 aa7.82□□□□□ -1.16
SCAMP1-205ENST00000614488 PAQR3Q6TCH7 311 aa7.82□□□□□ -1.16
SCAMP1-205ENST00000614488 CABP7Q86V35 215 aa7.82□□□□□ -1.16
SCAMP1-205ENST00000614488 TMEM145Q8NBT3 493 aa7.82□□□□□ -1.16
SCAMP1-205ENST00000614488 KCTD13Q8WZ19 329 aa7.82□□□□□ -1.16
SCAMP1-205ENST00000614488 C1orf159Q96HA4 380 aa7.82□□□□□ -1.16
SCAMP1-205ENST00000614488 MTA3Q9BTC8 594 aa7.82□□□□□ -1.16
SCAMP1-205ENST00000614488 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.82□□□□□ -1.165e-9■■■□□ 15.9
SCAMP1-205ENST00000614488 NUDT19A8MXV4 375 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 KRT1P04264 644 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 TMEM253P0C7T8 217 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 GLI4P10075 376 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 FGFR1P11362 822 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 TACR1P25103 407 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 VIPR1P32241 457 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 GRIA2P42262 883 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 MAPKAPK2P49137 400 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 SRSF3P84103 164 aaKnown RBP7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 RASA3Q14644 834 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 SF1Q15637 639 aaKnown RBP7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 RPTNQ6XPR3 784 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 PPIL6Q8IXY8 311 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 DIO2Q92813 273 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 MKL1Q969V6 931 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 ARHGEF4Q9NR80 690 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 GULP1Q9UBP9 304 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 RWDD3Q9Y3V2 267 aa7.81□□□□□ -1.16
SCAMP1-205ENST00000614488 ETV2O00321 342 aaPredicted RBP7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 LTBRP36941 435 aa7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 RAP1GAPP47736 663 aa7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 INF2Q27J81 1249 aa7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 PRSS53Q2L4Q9 553 aa7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 PLEKHN1Q494U1 663 aaPredicted RBP7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 MTERF2Q49AM1 385 aa7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 TMEM132EQ6IEE7 984 aa7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 CCDC103Q8IW40 242 aa7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 NETO2Q8NC67 525 aa7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 KCNN1Q92952 543 aa7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 IER2Q9BTL4 223 aa7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 SPATA9Q9BWV2 254 aa7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 SIRT5Q9NXA8 310 aa7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 MBD1Q9UIS9 605 aaPredicted RBP7.8□□□□□ -1.16
SCAMP1-205ENST00000614488 TRAV20A0A0B4J274 112 aa7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 PPP1R11O60927 126 aaPredicted RBP7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 GTF2A2P52657 109 aa7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 RPL11P62913 178 aaKnown RBP7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 DLG4P78352 724 aa7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 ZNF124Q15973 351 aa7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 ZC3H14Q6PJT7 736 aaKnown RBP7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 SPATC1Q76KD6 591 aa7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 Q8N1Y9 231 aa7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 DEPDC7Q96QD5 511 aa7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 GCM1Q9NP62 436 aa7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 CD320Q9NPF0 282 aa7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 TMEFF2Q9UIK5 374 aaPredicted RBP7.79□□□□□ -1.16
SCAMP1-205ENST00000614488 TIMM13Q9Y5L4 95 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms