RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 IRX3P78415 501 aaPredicted RBP9.61□□□□□ -0.87
PSMB3-208ENST00000613870 USP17L24Q0WX57 530 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 SF3A1Q15459 793 aaKnown RBP9.61□□□□□ -0.87
PSMB3-208ENST00000613870 NFKBIBQ15653 356 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 Q3C1V9 767 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 GALNT17Q6IS24 598 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 PPP1R18Q6NYC8 613 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 BTNL9Q6UXG8 535 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 NOSTRINQ8IVI9 506 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 CPXCR1Q8N123 301 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 ZNF713Q8N859 430 aaPredicted RBP9.61□□□□□ -0.87
PSMB3-208ENST00000613870 RGS22Q8NE09 1264 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 PHF20Q9BVI0 1012 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 FOXP1Q9H334 677 aaPredicted RBP9.61□□□□□ -0.87
PSMB3-208ENST00000613870 TXNRD2Q9NNW7 524 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 RBPJLQ9UBG7 517 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 GJD2Q9UKL4 321 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 CFAP45Q9UL16 551 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 PCDHA4Q9UN74 947 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 CNPY2Q9Y2B0 182 aa9.61□□□□□ -0.87
PSMB3-208ENST00000613870 GOLGA6L4A6NEF3 574 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 KIF28PB7ZC32 967 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 ADCY3O60266 1144 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 PLA2G6O60733 806 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 PRPF40AO75400 957 aaKnown RBP9.6□□□□□ -0.87
PSMB3-208ENST00000613870 PTMSP20962 102 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 NR5A1Q13285 461 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 IRF5Q13568 498 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 PLS1Q14651 629 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 COG2Q14746 738 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 STK38Q15208 465 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 CATSPERGQ6ZRH7 1159 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 SLAIN1Q8ND83 568 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 OXER1Q8TDS5 423 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 PXYLP1Q8TE99 480 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 CUL5Q93034 780 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 SPATA32Q96LK8 384 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 PSTPIP2Q9H939 334 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 GDPD2Q9HCC8 539 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 CCPG1Q9ULG6 757 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 PPP1R9AQ9ULJ8 1098 aa9.6□□□□□ -0.87
PSMB3-208ENST00000613870 RLFQ13129 1914 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 PPP1R11O60927 126 aaPredicted RBP9.59□□□□□ -0.87
PSMB3-208ENST00000613870 CNMDO75829 334 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 ALAS1P13196 640 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 CCL5P13501 91 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 ELNP15502 786 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 MYSM1Q5VVJ2 828 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 JAKMIP3Q5VZ66 844 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 TYW1BQ6NUM6 668 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 PIK3AP1Q6ZUJ8 805 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 FAM177A1Q8N128 213 aaPredicted RBP9.59□□□□□ -0.87
PSMB3-208ENST00000613870 REXO1Q8N1G1 1221 aaKnown RBP9.59□□□□□ -0.87
PSMB3-208ENST00000613870 RASGRP4Q8TDF6 673 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 SHISA4Q96DD7 197 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 ATG4CQ96DT6 458 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 MTMR8Q96EF0 704 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 GLT8D2Q9H1C3 349 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 RANBP17Q9H2T7 1088 aaKnown RBP9.59□□□□□ -0.87
PSMB3-208ENST00000613870 RAVER2Q9HCJ3 691 aaKnown RBP9.59□□□□□ -0.87
PSMB3-208ENST00000613870 HOXC10Q9NYD6 342 aa9.59□□□□□ -0.87
PSMB3-208ENST00000613870 BIN2Q9UBW5 565 aaPredicted RBP9.59□□□□□ -0.87
PSMB3-208ENST00000613870 MRPL11Q9Y3B7 192 aaKnown RBP9.59□□□□□ -0.87
PSMB3-208ENST00000613870 ABCB11O95342 1321 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 GJB1P08034 283 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 FDX1P10109 184 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 TAL1P17542 331 aaPredicted RBP9.58□□□□□ -0.88
PSMB3-208ENST00000613870 U2AF2P26368 475 aaKnown RBP eCLIP9.58□□□□□ -0.88
PSMB3-208ENST00000613870 DSG3P32926 999 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 ERVK-9P63128 1117 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 ERVK-24P63145 666 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 UBXN2AP68543 259 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 UBE2SQ16763 222 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 ATL3Q6DD88 541 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 KRT25Q7Z3Z0 450 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 GPRC5AQ8NFJ5 357 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 AGBL1Q96MI9 1066 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 PAGR1Q9BTK6 254 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 SCAND2PQ9GZW5 306 aaPredicted RBP9.58□□□□□ -0.88
PSMB3-208ENST00000613870 ZMYND12Q9H0C1 365 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 RNF208Q9H0X6 261 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 UNC93B1Q9H1C4 597 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 PORCNQ9H237 461 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 RIC8AQ9NPQ8 531 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 HOMER2Q9NSB8 354 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 TMEM260Q9NX78 707 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 PNMA2Q9UL42 364 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 PCDHA6Q9UN73 950 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 PCDHA8Q9Y5H6 950 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 BAZ2BQ9UIF8 2168 aaKnown RBP9.58□□□□□ -0.88
PSMB3-208ENST00000613870 MYH6P13533 1939 aa9.58□□□□□ -0.88
PSMB3-208ENST00000613870 ESYT2A0FGR8 921 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 FAM205CA6NFA0 338 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 SPDYE3A6NKU9 549 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 GCOM1H8Y6P7 765 aaPredicted RBP9.57□□□□□ -0.88
PSMB3-208ENST00000613870 VWA5AO00534 786 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 CFBP00751 764 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 INHAP05111 366 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 ICAM1P05362 532 aa9.57□□□□□ -0.88
PSMB3-208ENST00000613870 POLR2MP0CAP2 368 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms