RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 HOMER2Q9NSB8 354 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 SAP30BPQ9UHR5 308 aaKnown RBP16.09■□□□□ 0.17
VPS36-207ENST00000611132 ANKARQ7Z5J8 1434 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 TRIM49BA6NDI0 452 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 GJC1P36383 396 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 PRCPP42785 496 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 FAM26FQ5R3K3 315 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 NT5C3AQ9H0P0 336 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 NDST4Q9H3R1 872 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 INTS9Q9NV88 658 aaKnown RBP16.09■□□□□ 0.17
VPS36-207ENST00000611132 ARMCX3Q9UH62 379 aaPredicted RBP16.09■□□□□ 0.17
VPS36-207ENST00000611132 SHPRHQ149N8 1683 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 XRCC5P13010 732 aaKnown RBP16.09■□□□□ 0.17
VPS36-207ENST00000611132 NCAPHQ15003 741 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 ANKRD42Q8N9B4 389 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 STMN2Q93045 179 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 GPCPD1Q9NPB8 672 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 DISC1Q9NRI5 854 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 FAM114A2Q9NRY5 505 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 BIN2Q9UBW5 565 aaPredicted RBP16.09■□□□□ 0.17
VPS36-207ENST00000611132 PCDHA4Q9UN74 947 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 NEURL4Q96JN8 1562 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 EEF2P13639 858 aaKnown RBP16.09■□□□□ 0.17
VPS36-207ENST00000611132 PICALMQ13492 652 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 HIBCHQ6NVY1 386 aaPredicted RBP16.09■□□□□ 0.17
VPS36-207ENST00000611132 RIN2Q8WYP3 895 aaPredicted RBP16.09■□□□□ 0.17
VPS36-207ENST00000611132 PNKPQ96T60 521 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 CHP1Q99653 195 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 KLHL14Q9P2G3 628 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 L1RE1Q9UN81 338 aa16.09■□□□□ 0.17
VPS36-207ENST00000611132 PGRMC1O00264 195 aaKnown RBP16.08■□□□□ 0.17
VPS36-207ENST00000611132 PPP1R12CQ9BZL4 782 aa16.08■□□□□ 0.17
VPS36-207ENST00000611132 HDAC9Q9UKV0 1011 aa16.08■□□□□ 0.17
VPS36-207ENST00000611132 NOVA2Q9UNW9 492 aaKnown RBP16.08■□□□□ 0.17
VPS36-207ENST00000611132 STX2P32856 288 aa16.08■□□□□ 0.16
VPS36-207ENST00000611132 PLCB3Q01970 1234 aa16.08■□□□□ 0.16
VPS36-207ENST00000611132 SMC6Q96SB8 1091 aa16.08■□□□□ 0.16
VPS36-207ENST00000611132 KCND1Q9NSA2 647 aa16.08■□□□□ 0.16
VPS36-207ENST00000611132 ITIH6Q6UXX5 1313 aa16.08■□□□□ 0.16
VPS36-207ENST00000611132 DESP17661 470 aa16.08■□□□□ 0.16
VPS36-207ENST00000611132 ABCB4P21439 1286 aa16.08■□□□□ 0.16
VPS36-207ENST00000611132 TRIM65Q6PJ69 517 aa16.08■□□□□ 0.16
VPS36-207ENST00000611132 ZNF804AQ7Z570 1209 aa16.08■□□□□ 0.16
VPS36-207ENST00000611132 LIMA1Q9UHB6 759 aaKnown RBP16.08■□□□□ 0.16
VPS36-207ENST00000611132 HPCAL4Q9UM19 191 aa16.08■□□□□ 0.16
VPS36-207ENST00000611132 GUCY2CP25092 1073 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 FRMPD1Q5SYB0 1578 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 ZNF365Q70YC5 407 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 RSRC2Q7L4I2 434 aaKnown RBP16.07■□□□□ 0.16
VPS36-207ENST00000611132 SETDB2Q96T68 719 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.07■□□□□ 0.16
VPS36-207ENST00000611132 A0A1W2PQC6 194 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 H3BQF6 201 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 CCDC38Q502W7 563 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 NAA35Q5VZE5 725 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 TEX11Q8IYF3 940 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 MSANTD4Q8NCY6 345 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 PPP1R14CQ8TAE6 165 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 UHMK1Q8TAS1 419 aaKnown RBP16.07■□□□□ 0.16
VPS36-207ENST00000611132 OSBPL9Q96SU4 736 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 CNOT10Q9H9A5 744 aaKnown RBP16.07■□□□□ 0.16
VPS36-207ENST00000611132 OVOS2A0A0J9YW53 1432 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 OVOS2Q6IE36 1432 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 IFNAR2P48551 515 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 FKBP3Q00688 224 aaKnown RBP16.07■□□□□ 0.16
VPS36-207ENST00000611132 DHX9Q08211 1270 aaKnown RBP16.07■□□□□ 0.16
VPS36-207ENST00000611132 CCNI2Q6ZMN8 369 aaPredicted RBP16.07■□□□□ 0.16
VPS36-207ENST00000611132 RNF10Q8N5U6 811 aaKnown RBP16.07■□□□□ 0.16
VPS36-207ENST00000611132 PLAAQ9Y263 795 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 BZW2Q9Y6E2 419 aaKnown RBP16.07■□□□□ 0.16
VPS36-207ENST00000611132 CDC42BPGQ6DT37 1551 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 ZRANB2O95218 330 aaKnown RBP eCLIP16.07■□□□□ 0.16
VPS36-207ENST00000611132 PEX19P40855 299 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 CCDC93Q567U6 631 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.07■□□□□ 0.16
VPS36-207ENST00000611132 CPDO75976 1380 aa16.07■□□□□ 0.16
VPS36-207ENST00000611132 KLRF2D3W0D1 207 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 ADAT2Q7Z6V5 191 aaKnown RBP16.06■□□□□ 0.16
VPS36-207ENST00000611132 SPATA4Q8NEY3 305 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 LARP4BQ92615 738 aaKnown RBP16.06■□□□□ 0.16
VPS36-207ENST00000611132 DNM3Q9UQ16 869 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 ATP8A1Q9Y2Q0 1164 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 ERBB3P21860 1342 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 MAP3K15Q6ZN16 1313 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 GYG1P46976 350 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 ADAM9Q13443 819 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 CEP128Q6ZU80 1094 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 SMCR8Q8TEV9 937 aaPredicted RBP16.06■□□□□ 0.16
VPS36-207ENST00000611132 STAG1Q8WVM7 1258 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 PBKQ96KB5 322 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 MLXIPQ9HAP2 919 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 RIC8AQ9NPQ8 531 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 PANK4Q9NVE7 773 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 LOC102724159A0A0B4J2E5 919 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 EIF3HO15372 352 aaKnown RBP eCLIP16.06■□□□□ 0.16
VPS36-207ENST00000611132 IRAK1P51617 712 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 TRAF1Q13077 416 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 CUL1Q13616 776 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 PWP2Q15269 919 aaKnown RBP16.06■□□□□ 0.16
VPS36-207ENST00000611132 FYB2Q5VWT5 728 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms