RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 MYADML2A6NDP7 307 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 SLC27A2O14975 620 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 ZBTB5O15062 677 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 DYNC1LI2O43237 492 aaPredicted RBP12.25□□□□□ -0.45
CCDC9-203ENST00000596938 DHX16O60231 1041 aaKnown RBP12.25□□□□□ -0.45
CCDC9-203ENST00000596938 ASGR1P07306 291 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 SMPD1P17405 629 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 CDK7P50613 346 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 ANTXR2P58335 489 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 IRX5P78411 483 aaPredicted RBP12.25□□□□□ -0.45
CCDC9-203ENST00000596938 TRAF1Q13077 416 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 GRM4Q14833 912 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 TMEM67Q5HYA8 995 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 NOL8Q76FK4 1167 aaKnown RBP12.25□□□□□ -0.45
CCDC9-203ENST00000596938 EEPD1Q7L9B9 569 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 TMTC2Q8N394 836 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 SAMD3Q8N6K7 520 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 TBC1D5Q92609 795 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 CCDC136Q96JN2 1154 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 GLT1D1Q96MS3 346 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 MAP3K14Q99558 947 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 AMNQ9BXJ7 453 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 UBE2OQ9C0C9 1292 aaKnown RBP12.25□□□□□ -0.45
CCDC9-203ENST00000596938 AP5M1Q9H0R1 490 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 RIOX1Q9H6W3 641 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 SENP2Q9HC62 589 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 STARD7Q9NQZ5 370 aa12.25□□□□□ -0.45
CCDC9-203ENST00000596938 DDX49Q9Y6V7 483 aaKnown RBP12.25□□□□□ -0.45
CCDC9-203ENST00000596938 SZT2Q5T011 3432 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 CABYRO75952 493 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 MCM5P33992 734 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 MDM2Q00987 491 aaPredicted RBP12.24□□□□□ -0.45
CCDC9-203ENST00000596938 GHRHRQ02643 423 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 PDE4DQ08499 809 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 LRIT3Q3SXY7 679 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 DUSP28Q4G0W2 176 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 CREB3L3Q68CJ9 461 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 CASC1Q6TDU7 716 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 CHST3Q7LGC8 479 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 CATIPQ7Z7H3 387 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 TLK2Q86UE8 772 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 SKAP1Q86WV1 359 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 FBXO16Q8IX29 292 aaPredicted RBP12.24□□□□□ -0.45
CCDC9-203ENST00000596938 TDHQ8IZJ6 230 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 SYTL5Q8TDW5 730 aaPredicted RBP12.24□□□□□ -0.45
CCDC9-203ENST00000596938 TMEM87BQ96K49 555 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 IWS1Q96ST2 819 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 WDR11Q9BZH6 1224 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 ANO2Q9NQ90 1003 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 PDLIM7Q9NR12 457 aa12.24□□□□□ -0.45
CCDC9-203ENST00000596938 MAP3K20Q9NYL2 800 aaKnown RBP12.24□□□□□ -0.45
CCDC9-203ENST00000596938 TRIM43BA6NCK2 446 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 DCDC2CA8MYV0 355 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 KIAA0355O15063 1070 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 PRC1O43663 620 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 ZEB2O60315 1214 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 CLTBP09497 229 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 SMARCA1P28370 1054 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 LIFRP42702 1097 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 FAAP100Q0VG06 881 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 FSCN1Q16658 493 aaKnown RBP12.23□□□□□ -0.45
CCDC9-203ENST00000596938 SLC35G1Q2M3R5 365 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 TMEM63BQ5T3F8 832 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 SH3RF1Q7Z6J0 888 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 NSUN6Q8TEA1 469 aaKnown RBP12.23□□□□□ -0.45
CCDC9-203ENST00000596938 VTI1AQ96AJ9 217 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 TRIM43Q96BQ3 446 aaPredicted RBP12.23□□□□□ -0.45
CCDC9-203ENST00000596938 TAAR1Q96RJ0 339 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 SEZ6LQ9BYH1 1024 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 LY9Q9HBG7 655 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 LAMA4Q16363 1823 aa12.23□□□□□ -0.45
CCDC9-203ENST00000596938 TRIOBPQ9H2D6 2365 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 MROH7Q68CQ1 1323 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 PNMA6FA0A0J9YX94 578 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 ARVCFO00192 962 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 OPLAHO14841 1288 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 NKRFO15226 690 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCDC9-203ENST00000596938 CYTH3O43739 400 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 PQBP1O60828 265 aaKnown RBP12.22□□□□□ -0.45
CCDC9-203ENST00000596938 PPP1R11O60927 126 aaPredicted RBP12.22□□□□□ -0.45
CCDC9-203ENST00000596938 CDC45O75419 566 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 DDAH1O94760 285 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 HSD17B4P51659 736 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 BEX3Q00994 111 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 TSGA10IPQ3SY00 556 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 RNF20Q5VTR2 975 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 SLC43A3Q8NBI5 491 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 SCFD2Q8WU76 684 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 RMDN3Q96TC7 470 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 PRDM5Q9NQX1 630 aaPredicted RBP12.22□□□□□ -0.45
CCDC9-203ENST00000596938 TMEM39AQ9NV64 488 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 PCDH10Q9P2E7 1040 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 PCDHA1Q9Y5I3 950 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 PLXNA1Q9UIW2 1896 aa12.22□□□□□ -0.45
CCDC9-203ENST00000596938 SMCHD1A6NHR9 2005 aa12.21□□□□□ -0.45
CCDC9-203ENST00000596938 A0A0U1RQG5 324 aaPredicted RBP12.21□□□□□ -0.45
CCDC9-203ENST00000596938 SH2B2O14492 632 aaPredicted RBP12.21□□□□□ -0.45
CCDC9-203ENST00000596938 KIF5BP33176 963 aa12.21□□□□□ -0.45
CCDC9-203ENST00000596938 STXBP2Q15833 593 aa12.21□□□□□ -0.45
CCDC9-203ENST00000596938 GPR153Q6NV75 609 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms