RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 LOC102724159A0A0B4J2E5 919 aa17.5■□□□□ 0.39
XRCC1-205ENST00000595789 RBM47A0AV96 593 aaKnown RBP17.5■□□□□ 0.39
XRCC1-205ENST00000595789 PBX2P40425 430 aa17.5■□□□□ 0.39
XRCC1-205ENST00000595789 ALDH5A1P51649 535 aaPredicted RBP17.5■□□□□ 0.39
XRCC1-205ENST00000595789 HAND2P61296 217 aa17.5■□□□□ 0.39
XRCC1-205ENST00000595789 PSMC6P62333 389 aa17.5■□□□□ 0.39
XRCC1-205ENST00000595789 ZNF543Q08ER8 600 aa17.5■□□□□ 0.39
XRCC1-205ENST00000595789 PWP2Q15269 919 aaKnown RBP17.5■□□□□ 0.39
XRCC1-205ENST00000595789 PSRC1Q6PGN9 363 aaPredicted RBP17.5■□□□□ 0.39
XRCC1-205ENST00000595789 TBC1D10CQ8IV04 446 aa17.5■□□□□ 0.39
XRCC1-205ENST00000595789 HERVK_113Q902F9 699 aa17.5■□□□□ 0.39
XRCC1-205ENST00000595789 VWCEQ96DN2 955 aa17.5■□□□□ 0.39
XRCC1-205ENST00000595789 NOC4LQ9BVI4 516 aaKnown RBP17.5■□□□□ 0.39
XRCC1-205ENST00000595789 ADD3Q9UEY8 706 aaKnown RBP17.5■□□□□ 0.39
XRCC1-205ENST00000595789 CCDC171Q6TFL3 1326 aa17.49■□□□□ 0.39
XRCC1-205ENST00000595789 ZEB2O60315 1214 aa17.49■□□□□ 0.39
XRCC1-205ENST00000595789 B4GALT4O60513 344 aa17.49■□□□□ 0.39
XRCC1-205ENST00000595789 AKNAD1Q5T1N1 836 aa17.49■□□□□ 0.39
XRCC1-205ENST00000595789 SMC5Q8IY18 1101 aa17.49■□□□□ 0.39
XRCC1-205ENST00000595789 LNPKQ9C0E8 428 aa17.49■□□□□ 0.39
XRCC1-205ENST00000595789 HIPK3Q9H422 1215 aa17.49■□□□□ 0.39
XRCC1-205ENST00000595789 CXXC1Q9P0U4 656 aaPredicted RBP17.49■□□□□ 0.39
XRCC1-205ENST00000595789 PCP11498 1178 aaKnown RBP17.48■□□□□ 0.39
XRCC1-205ENST00000595789 SLC30A10Q6XR72 485 aa17.48■□□□□ 0.39
XRCC1-205ENST00000595789 MFSD6Q6ZSS7 791 aa17.48■□□□□ 0.39
XRCC1-205ENST00000595789 USP38Q8NB14 1042 aa17.48■□□□□ 0.39
XRCC1-205ENST00000595789 WDR11Q9BZH6 1224 aa17.48■□□□□ 0.39
XRCC1-205ENST00000595789 WNT8AQ9H1J5 351 aa17.48■□□□□ 0.39
XRCC1-205ENST00000595789 CHD7Q9P2D1 2997 aa17.48■□□□□ 0.39
XRCC1-205ENST00000595789 WDR19Q8NEZ3 1342 aa17.47■□□□□ 0.39
XRCC1-205ENST00000595789 PTPDC1A2A3K4 754 aa17.47■□□□□ 0.39
XRCC1-205ENST00000595789 FGBP02675 491 aa17.47■□□□□ 0.39
XRCC1-205ENST00000595789 SDSP20132 328 aa17.47■□□□□ 0.39
XRCC1-205ENST00000595789 EDNRBP24530 442 aa17.47■□□□□ 0.39
XRCC1-205ENST00000595789 RPS6P62753 249 aaKnown RBP17.47■□□□□ 0.39
XRCC1-205ENST00000595789 ALDH8A1Q9H2A2 487 aaPredicted RBP17.47■□□□□ 0.39
XRCC1-205ENST00000595789 OSBPL3Q9H4L5 887 aa17.47■□□□□ 0.39
XRCC1-205ENST00000595789 PNMA2Q9UL42 364 aa17.47■□□□□ 0.39
XRCC1-205ENST00000595789 TRIM6-TRIM34B2RNG4 842 aa17.46■□□□□ 0.39
XRCC1-205ENST00000595789 CALML3P27482 149 aa17.46■□□□□ 0.39
XRCC1-205ENST00000595789 CCL23P55773 120 aa17.46■□□□□ 0.39
XRCC1-205ENST00000595789 PURAQ00577 322 aaKnown RBP17.46■□□□□ 0.39
XRCC1-205ENST00000595789 RNF207Q6ZRF8 634 aa17.46■□□□□ 0.39
XRCC1-205ENST00000595789 PLEKHM2Q8IWE5 1019 aa17.46■□□□□ 0.39
XRCC1-205ENST00000595789 RILPL2Q969X0 211 aa17.46■□□□□ 0.39
XRCC1-205ENST00000595789 POLR3EQ9NVU0 708 aa17.46■□□□□ 0.39
XRCC1-205ENST00000595789 NEDD4P46934 1319 aa17.46■□□□□ 0.38
XRCC1-205ENST00000595789 NCOR1O75376 2440 aa17.45■□□□□ 0.38
XRCC1-205ENST00000595789 AAMPQ13685 434 aa17.45■□□□□ 0.38
XRCC1-205ENST00000595789 DGKHQ86XP1 1220 aa17.45■□□□□ 0.38
XRCC1-205ENST00000595789 RGS22Q8NE09 1264 aa17.45■□□□□ 0.38
XRCC1-205ENST00000595789 ZKSCAN3Q9BRR0 538 aa17.45■□□□□ 0.38
XRCC1-205ENST00000595789 CPVLQ9H3G5 476 aa17.45■□□□□ 0.38
XRCC1-205ENST00000595789 RNF41Q9H4P4 317 aaPredicted RBP17.45■□□□□ 0.38
XRCC1-205ENST00000595789 MUC3AQ02505 3323 aa17.45■□□□□ 0.38
XRCC1-205ENST00000595789 A6NJR5 290 aa17.44■□□□□ 0.38
XRCC1-205ENST00000595789 GOLGA8HP0CJ92 632 aa17.44■□□□□ 0.38
XRCC1-205ENST00000595789 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
XRCC1-205ENST00000595789 OTOP2Q7RTS6 562 aa17.44■□□□□ 0.38
XRCC1-205ENST00000595789 DNERQ8NFT8 737 aa17.44■□□□□ 0.38
XRCC1-205ENST00000595789 ANKS1AQ92625 1134 aa17.44■□□□□ 0.38
XRCC1-205ENST00000595789 ESR2Q92731 530 aa17.44■□□□□ 0.38
XRCC1-205ENST00000595789 PRDM12Q9H4Q4 367 aa17.44■□□□□ 0.38
XRCC1-205ENST00000595789 TRMT13Q9NUP7 481 aaKnown RBP17.44■□□□□ 0.38
XRCC1-205ENST00000595789 YBX2Q9Y2T7 364 aaKnown RBP17.44■□□□□ 0.38
XRCC1-205ENST00000595789 IGHDP01880 384 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 MYL3P08590 195 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 CPT1AP50416 773 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 MFAP1P55081 439 aaKnown RBP17.43■□□□□ 0.38
XRCC1-205ENST00000595789 NUCB1Q02818 461 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 PDE4DQ08499 809 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 ADGRE1Q14246 886 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 RAB30Q15771 203 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 GPATCH4Q5T3I0 446 aaKnown RBP17.43■□□□□ 0.38
XRCC1-205ENST00000595789 CHD1LQ86WJ1 897 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 OR6J1Q8NGC5 347 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 SCFD2Q8WU76 684 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 TBC1D5Q92609 795 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 COPS5Q92905 334 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 SCLYQ96I15 445 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 UBA5Q9GZZ9 404 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 RWDD1Q9H446 243 aaPredicted RBP17.43■□□□□ 0.38
XRCC1-205ENST00000595789 MSRAQ9UJ68 235 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 TNKSO95271 1327 aa17.43■□□□□ 0.38
XRCC1-205ENST00000595789 ZNF213O14771 459 aa17.42■□□□□ 0.38
XRCC1-205ENST00000595789 NKRFO15226 690 aaKnown RBP eCLIP17.42■□□□□ 0.38
XRCC1-205ENST00000595789 ARIH2O95376 493 aa17.42■□□□□ 0.38
XRCC1-205ENST00000595789 CYP2C9P11712 490 aa17.42■□□□□ 0.38
XRCC1-205ENST00000595789 NBPF20Q3BBV1 942 aa17.42■□□□□ 0.38
XRCC1-205ENST00000595789 RPUSD2Q8IZ73 545 aaKnown RBP17.42■□□□□ 0.38
XRCC1-205ENST00000595789 MTG1Q9BT17 334 aaPredicted RBP17.42■□□□□ 0.38
XRCC1-205ENST00000595789 MTIF3Q9H2K0 278 aaKnown RBP17.42■□□□□ 0.38
XRCC1-205ENST00000595789 NKX2-4Q9H2Z4 354 aa17.42■□□□□ 0.38
XRCC1-205ENST00000595789 PRDM6Q9NQX0 595 aa17.42■□□□□ 0.38
XRCC1-205ENST00000595789 SCN10AQ9Y5Y9 1956 aa17.41■□□□□ 0.38
XRCC1-205ENST00000595789 KDM4AO75164 1064 aa17.41■□□□□ 0.38
XRCC1-205ENST00000595789 SUPT20HL2P0C7V6 817 aa17.41■□□□□ 0.38
XRCC1-205ENST00000595789 NT5C2P49902 561 aa17.41■□□□□ 0.38
XRCC1-205ENST00000595789 PPP2R5BQ15173 497 aa17.41■□□□□ 0.38
XRCC1-205ENST00000595789 USH1GQ495M9 461 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms