RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 SLC15A5A6NIM6 579 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 B4DLN1 442 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 GPR25O00155 361 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 STX6O43752 255 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 CFBP00751 764 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 KRT2P35908 639 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 HSD17B4P51659 736 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 FCGRTP55899 365 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 LACTBP83111 547 aaPredicted RBP12.23□□□□□ -0.45
SMAD4-214ENST00000592186 MUM1L1Q5H9M0 696 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 WDR78Q5VTH9 848 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 TYW1BQ6NUM6 668 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 REXO1Q8N1G1 1221 aaKnown RBP12.23□□□□□ -0.45
SMAD4-214ENST00000592186 MMP19Q99542 508 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 PORCNQ9H237 461 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 FOXP1Q9H334 677 aaPredicted RBP12.23□□□□□ -0.45
SMAD4-214ENST00000592186 EHMT1Q9H9B1 1298 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 KCNJ14Q9UNX9 436 aa12.23□□□□□ -0.45
SMAD4-214ENST00000592186 SPDYE3A6NKU9 549 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 NFIBO00712 420 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 MEIS2O14770 477 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 OPLAHO14841 1288 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 PEX10O60683 326 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 DTNBO60941 627 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 FKTNO75072 461 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 PTPREP23469 700 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 HOXD10P28358 340 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 RPS6P62753 249 aaKnown RBP12.22□□□□□ -0.45
SMAD4-214ENST00000592186 NUCB2P80303 420 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 AP3B2Q13367 1082 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 GNL2Q13823 731 aaKnown RBP12.22□□□□□ -0.45
SMAD4-214ENST00000592186 BAATQ14032 418 aaPredicted RBP12.22□□□□□ -0.45
SMAD4-214ENST00000592186 NSMFQ6X4W1 530 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 GPR142Q7Z601 462 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 ERO1AQ96HE7 468 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 MPHOSPH6Q99547 160 aaKnown RBP12.22□□□□□ -0.45
SMAD4-214ENST00000592186 R3HDMLQ9H3Y0 253 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 EFCC1Q9HA90 598 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 A1CFQ9NQ94 594 aaKnown RBP12.22□□□□□ -0.45
SMAD4-214ENST00000592186 CYP39A1Q9NYL5 469 aa12.22□□□□□ -0.45
SMAD4-214ENST00000592186 ADD3Q9UEY8 706 aaKnown RBP12.22□□□□□ -0.45
SMAD4-214ENST00000592186 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
SMAD4-214ENST00000592186 DIS3Q9Y2L1 958 aaKnown RBP12.22□□□□□ -0.45
SMAD4-214ENST00000592186 A0A0G2JMZ2 1700 aa12.21□□□□□ -0.45
SMAD4-214ENST00000592186 LOC102724159A0A0B4J2E5 919 aa12.21□□□□□ -0.45
SMAD4-214ENST00000592186 TNPO2O14787 897 aaKnown RBP12.21□□□□□ -0.45
SMAD4-214ENST00000592186 U2AF2P26368 475 aaKnown RBP eCLIP12.21□□□□□ -0.452e-7■■■□□ 17.5
SMAD4-214ENST00000592186 PSMC4P43686 418 aa12.21□□□□□ -0.45
SMAD4-214ENST00000592186 PWP2Q15269 919 aaKnown RBP12.21□□□□□ -0.45
SMAD4-214ENST00000592186 KRT25Q7Z3Z0 450 aa12.21□□□□□ -0.45
SMAD4-214ENST00000592186 DIS3L2Q8IYB7 885 aaKnown RBP12.21□□□□□ -0.45
SMAD4-214ENST00000592186 DNERQ8NFT8 737 aa12.21□□□□□ -0.45
SMAD4-214ENST00000592186 NSUN6Q8TEA1 469 aaKnown RBP12.21□□□□□ -0.45
SMAD4-214ENST00000592186 SOCS4Q8WXH5 440 aa12.21□□□□□ -0.45
SMAD4-214ENST00000592186 NUDT12Q9BQG2 462 aa12.21□□□□□ -0.45
SMAD4-214ENST00000592186 ZSCAN16Q9H4T2 348 aaPredicted RBP12.21□□□□□ -0.45
SMAD4-214ENST00000592186 GJB4Q9NTQ9 266 aa12.21□□□□□ -0.45
SMAD4-214ENST00000592186 PARP14Q460N5 1801 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 DNAJC25-GNG10A0A024R161 153 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 CCDC194A0A1B0GVG4 234 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 VPS37CA5D8V6 355 aaPredicted RBP12.2□□□□□ -0.46
SMAD4-214ENST00000592186 BTBD18B2RXH4 712 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 CLK2P49760 499 aaKnown RBP12.2□□□□□ -0.46
SMAD4-214ENST00000592186 GUCY1B3Q02153 619 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 GRB14Q14449 540 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 MCTP1Q6DN14 999 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 XRRA1Q6P2D8 792 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 USP17L6PQ6QN14 398 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 BRAPQ7Z569 592 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 DPP9Q86TI2 863 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 SYTL5Q8TDW5 730 aaPredicted RBP12.2□□□□□ -0.46
SMAD4-214ENST00000592186 TBC1D5Q92609 795 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 IWS1Q96ST2 819 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 BIN2Q9UBW5 565 aaPredicted RBP12.2□□□□□ -0.46
SMAD4-214ENST00000592186 PCDHA6Q9UN73 950 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 PCDHA8Q9Y5H6 950 aa12.2□□□□□ -0.46
SMAD4-214ENST00000592186 M0R2N6 131 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 ZSCAN22P10073 491 aaPredicted RBP12.19□□□□□ -0.46
SMAD4-214ENST00000592186 ADORA2AP29274 412 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 HOXA13P31271 388 aaPredicted RBP12.19□□□□□ -0.46
SMAD4-214ENST00000592186 DDIT3P35638 169 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 USP11P51784 963 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 FOSBP53539 338 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 PRMT2P55345 433 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 NPY5RQ15761 445 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 MORN1Q5T089 497 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 ZNF467Q7Z7K2 595 aaPredicted RBP12.19□□□□□ -0.46
SMAD4-214ENST00000592186 FCHSD1Q86WN1 690 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 NOSTRINQ8IVI9 506 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 MSL3Q8N5Y2 521 aaKnown RBP12.19□□□□□ -0.46
SMAD4-214ENST00000592186 FAM133AQ8N9E0 248 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 SHISA4Q96DD7 197 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 RMDN3Q96TC7 470 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 NAP1L4Q99733 375 aaKnown RBP12.19□□□□□ -0.46
SMAD4-214ENST00000592186 MTMR6Q9Y217 621 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 ATP6V1DQ9Y5K8 247 aa12.19□□□□□ -0.46
SMAD4-214ENST00000592186 BAZ2BQ9UIF8 2168 aaKnown RBP12.19□□□□□ -0.46
SMAD4-214ENST00000592186 ASB14A6NK59 587 aa12.18□□□□□ -0.46
SMAD4-214ENST00000592186 HOXC6P09630 235 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms