RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 UCN2Q96RP3 112 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 PTPN18Q99952 460 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 MRIQ9BWK5 157 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 SRCIN1Q9C0H9 1055 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 SRA1Q9HD15 236 aaKnown RBP6.96□□□□□ -1.3
DNMT1-220ENST00000589351 C11orf16Q9NQ32 467 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 ADGRE2Q9UHX3 823 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 JAG2Q9Y219 1238 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 SUGT1Q9Y2Z0 365 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 RBM19Q9Y4C8 960 aaKnown RBP6.96□□□□□ -1.3
DNMT1-220ENST00000589351 PCDHAC2Q9Y5I4 1007 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 MAST3O60307 1309 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 IRS2Q9Y4H2 1338 aa6.96□□□□□ -1.3
DNMT1-220ENST00000589351 PRR19A6NJB7 356 aa6.95□□□□□ -1.3
DNMT1-220ENST00000589351 F6X3S4 739 aa6.95□□□□□ -1.3
DNMT1-220ENST00000589351 LGR5O75473 907 aa6.95□□□□□ -1.3
DNMT1-220ENST00000589351 CAPN2P17655 700 aa6.95□□□□□ -1.3
DNMT1-220ENST00000589351 ARID4AP29374 1257 aaPredicted RBP6.95□□□□□ -1.3
DNMT1-220ENST00000589351 ZEB1P37275 1124 aaPredicted RBP6.95□□□□□ -1.3
DNMT1-220ENST00000589351 GRIK1P39086 918 aa6.95□□□□□ -1.3
DNMT1-220ENST00000589351 GYG1P46976 350 aa6.95□□□□□ -1.3
DNMT1-220ENST00000589351 EXOSC9Q06265 439 aaKnown RBP6.95□□□□□ -1.3
DNMT1-220ENST00000589351 VGLL4Q14135 290 aa6.95□□□□□ -1.3
DNMT1-220ENST00000589351 FKBP1CQ5VVH2 108 aa6.95□□□□□ -1.3
DNMT1-220ENST00000589351 SLC4A10Q6U841 1118 aa6.95□□□□□ -1.3
DNMT1-220ENST00000589351 FAM83AQ86UY5 434 aa6.95□□□□□ -1.3
DNMT1-220ENST00000589351 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.95□□□□□ -1.3
DNMT1-220ENST00000589351 BRI3BPQ8WY22 251 aa6.95□□□□□ -1.3
DNMT1-220ENST00000589351 PTCH2Q9Y6C5 1203 aa6.95□□□□□ -1.3
DNMT1-220ENST00000589351 ZNF646O15015 1829 aaPredicted RBP6.94□□□□□ -1.3
DNMT1-220ENST00000589351 ATP9BO43861 1147 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 MICAL2O94851 1124 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 WISP1O95388 367 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 WNT11O96014 354 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 IFIT1P09914 478 aaKnown RBP6.94□□□□□ -1.3
DNMT1-220ENST00000589351 UBXN2AP68543 259 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 JAG1P78504 1218 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 LACTBP83111 547 aaPredicted RBP6.94□□□□□ -1.3
DNMT1-220ENST00000589351 PPATQ06203 517 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 CHAF1AQ13111 956 aaPredicted RBP6.94□□□□□ -1.3
DNMT1-220ENST00000589351 PPIL2Q13356 520 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 METTL24Q5JXM2 366 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 FBXO33Q7Z6M2 555 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 MAP4K3Q8IVH8 894 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 TRIM42Q8IWZ5 723 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 FAM43AQ8N2R8 423 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 GALNT11Q8NCW6 608 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 DPF3Q92784 378 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 TEPSINQ96N21 525 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 WRNIP1Q96S55 665 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 HTATIP2Q9BUP3 242 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 ZNF341Q9BYN7 854 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 TMEM39BQ9GZU3 492 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 C7orf69Q9H7B7 122 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 BIN2Q9UBW5 565 aaPredicted RBP6.94□□□□□ -1.3
DNMT1-220ENST00000589351 USP20Q9Y2K6 914 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 FANCIQ9NVI1 1328 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 SSC5DA1L4H1 1573 aa6.94□□□□□ -1.3
DNMT1-220ENST00000589351 LAMB1P07942 1786 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 RBBP6Q7Z6E9 1792 aaKnown RBP6.93□□□□□ -1.3
DNMT1-220ENST00000589351 HMX2A2RU54 273 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 POM121CA8CG34 1229 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 PDE8BO95263 885 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 EPHA10Q5JZY3 1008 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 HHIPL2Q6UWX4 724 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 ANKRD23Q86SG2 305 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 WDR66Q8TBY9 1149 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 RAET1EQ8TD07 263 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 ZKSCAN4Q969J2 545 aaPredicted RBP6.93□□□□□ -1.3
DNMT1-220ENST00000589351 ZDHHC15Q96MV8 337 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 MRS2Q9HD23 443 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 GNL3LQ9NVN8 582 aaKnown RBP6.93□□□□□ -1.3
DNMT1-220ENST00000589351 TRIM33Q9UPN9 1127 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 RIPOR2Q9Y4F9 1068 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 NR2E3Q9Y5X4 410 aa6.93□□□□□ -1.3
DNMT1-220ENST00000589351 BTBD19C9JJ37 291 aa6.92□□□□□ -1.3
DNMT1-220ENST00000589351 OPLAHO14841 1288 aa6.92□□□□□ -1.3
DNMT1-220ENST00000589351 GRK4P32298 578 aa6.92□□□□□ -1.3
DNMT1-220ENST00000589351 PSMC4P43686 418 aa6.92□□□□□ -1.3
DNMT1-220ENST00000589351 FXR1P51114 621 aaKnown RBP eCLIP6.92□□□□□ -1.3
DNMT1-220ENST00000589351 SEC13P55735 322 aa6.92□□□□□ -1.3
DNMT1-220ENST00000589351 RNF43Q68DV7 783 aa6.92□□□□□ -1.3
DNMT1-220ENST00000589351 SH3TC2Q8TF17 1288 aa6.92□□□□□ -1.3
DNMT1-220ENST00000589351 FAM151AQ8WW52 585 aa6.92□□□□□ -1.3
DNMT1-220ENST00000589351 NSUN5Q96P11 429 aaKnown RBP6.92□□□□□ -1.3
DNMT1-220ENST00000589351 HINFPQ9BQA5 517 aa6.92□□□□□ -1.3
DNMT1-220ENST00000589351 PUS3Q9BZE2 481 aaKnown RBP6.92□□□□□ -1.3
DNMT1-220ENST00000589351 SRRDQ9UH36 339 aa6.92□□□□□ -1.3
DNMT1-220ENST00000589351 HDAC5Q9UQL6 1122 aa6.92□□□□□ -1.3
DNMT1-220ENST00000589351 SNCAIPQ9Y6H5 919 aa6.92□□□□□ -1.3
DNMT1-220ENST00000589351 H0YGN5 161 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 PDHXO00330 501 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 ANP32CO43423 234 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 MMP20O60882 483 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 GHRHP01286 108 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 NBPF7P0C2Y1 421 aaPredicted RBP6.91□□□□□ -1.3
DNMT1-220ENST00000589351 SLC5A1P13866 664 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 CACNB3P54284 484 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 FCGRTP55899 365 aa6.91□□□□□ -1.3
DNMT1-220ENST00000589351 PUM3Q15397 648 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms