RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 IQSEC1Q6DN90 963 aa16.12■□□□□ 0.17
HDAC5-208ENST00000588419 OR6J1Q8NGC5 347 aa16.12■□□□□ 0.17
HDAC5-208ENST00000588419 PPM1EQ8WY54 764 aa16.12■□□□□ 0.17
HDAC5-208ENST00000588419 TRPV6Q9H1D0 765 aa16.12■□□□□ 0.17
HDAC5-208ENST00000588419 ZNF576Q9H609 170 aa16.12■□□□□ 0.17
HDAC5-208ENST00000588419 NEDD4P46934 1319 aa16.12■□□□□ 0.17
HDAC5-208ENST00000588419 TRIP12Q14669 1992 aaPredicted RBP16.11■□□□□ 0.17
HDAC5-208ENST00000588419 CD4P01730 458 aa16.11■□□□□ 0.17
HDAC5-208ENST00000588419 GOLGA8HP0CJ92 632 aa16.11■□□□□ 0.17
HDAC5-208ENST00000588419 AKNAD1Q5T1N1 836 aa16.11■□□□□ 0.17
HDAC5-208ENST00000588419 RNF207Q6ZRF8 634 aa16.11■□□□□ 0.17
HDAC5-208ENST00000588419 C16orf59Q7L2K0 433 aa16.11■□□□□ 0.17
HDAC5-208ENST00000588419 PPP1R13LQ8WUF5 828 aa16.11■□□□□ 0.17
HDAC5-208ENST00000588419 PBX4Q9BYU1 374 aa16.11■□□□□ 0.17
HDAC5-208ENST00000588419 WDR11Q9BZH6 1224 aa16.11■□□□□ 0.17
HDAC5-208ENST00000588419 IL23AQ9NPF7 189 aa16.11■□□□□ 0.17
HDAC5-208ENST00000588419 ZMYM6O95789 1325 aa16.11■□□□□ 0.17
HDAC5-208ENST00000588419 SCN10AQ9Y5Y9 1956 aa16.1■□□□□ 0.17
HDAC5-208ENST00000588419 FGRP09769 529 aa16.1■□□□□ 0.17
HDAC5-208ENST00000588419 NOVP48745 357 aa16.1■□□□□ 0.17
HDAC5-208ENST00000588419 CHMP4BP1P59074 171 aa16.1■□□□□ 0.17
HDAC5-208ENST00000588419 PDE4DQ08499 809 aa16.1■□□□□ 0.17
HDAC5-208ENST00000588419 ZNF543Q08ER8 600 aa16.1■□□□□ 0.17
HDAC5-208ENST00000588419 FAM47CQ5HY64 1035 aa16.1■□□□□ 0.17
HDAC5-208ENST00000588419 BTNL9Q6UXG8 535 aa16.1■□□□□ 0.17
HDAC5-208ENST00000588419 OTOP2Q7RTS6 562 aa16.1■□□□□ 0.17
HDAC5-208ENST00000588419 GAS2L1Q99501 681 aaPredicted RBP16.1■□□□□ 0.17
HDAC5-208ENST00000588419 MTIF3Q9H2K0 278 aaKnown RBP16.1■□□□□ 0.17
HDAC5-208ENST00000588419 CPVLQ9H3G5 476 aa16.1■□□□□ 0.17
HDAC5-208ENST00000588419 GRIN2DO15399 1336 aa16.1■□□□□ 0.17
HDAC5-208ENST00000588419 ZBBXA8MT70 800 aa16.09■□□□□ 0.17
HDAC5-208ENST00000588419 SDSP20132 328 aa16.09■□□□□ 0.17
HDAC5-208ENST00000588419 MFAP1P55081 439 aaKnown RBP16.09■□□□□ 0.17
HDAC5-208ENST00000588419 NKX3-2P78367 333 aa16.09■□□□□ 0.17
HDAC5-208ENST00000588419 DUSP28Q4G0W2 176 aa16.09■□□□□ 0.17
HDAC5-208ENST00000588419 CWC27Q6UX04 472 aaKnown RBP16.09■□□□□ 0.17
HDAC5-208ENST00000588419 USP38Q8NB14 1042 aa16.09■□□□□ 0.17
HDAC5-208ENST00000588419 ESR2Q92731 530 aa16.09■□□□□ 0.17
HDAC5-208ENST00000588419 SCLYQ96I15 445 aa16.09■□□□□ 0.17
HDAC5-208ENST00000588419 MPHOSPH6Q99547 160 aaKnown RBP16.09■□□□□ 0.17
HDAC5-208ENST00000588419 RNF41Q9H4P4 317 aaPredicted RBP16.09■□□□□ 0.17
HDAC5-208ENST00000588419 PRDM12Q9H4Q4 367 aa16.09■□□□□ 0.17
HDAC5-208ENST00000588419 GPHNQ9NQX3 736 aaPredicted RBP16.09■□□□□ 0.17
HDAC5-208ENST00000588419 DIAPH3Q9NSV4 1193 aa16.09■□□□□ 0.17
HDAC5-208ENST00000588419 TCP11L1Q9NUJ3 509 aa16.09■□□□□ 0.17
HDAC5-208ENST00000588419 CXXC1Q9P0U4 656 aaPredicted RBP16.09■□□□□ 0.17
HDAC5-208ENST00000588419 ZNF213O14771 459 aa16.08■□□□□ 0.16
HDAC5-208ENST00000588419 DHX16O60231 1041 aaKnown RBP16.08■□□□□ 0.16
HDAC5-208ENST00000588419 FGBP02675 491 aa16.08■□□□□ 0.16
HDAC5-208ENST00000588419 CPT1AP50416 773 aa16.08■□□□□ 0.16
HDAC5-208ENST00000588419 RPS6P62753 249 aaKnown RBP16.08■□□□□ 0.16
HDAC5-208ENST00000588419 PPP2R5BQ15173 497 aa16.08■□□□□ 0.16
HDAC5-208ENST00000588419 SLC43A3Q8NBI5 491 aa16.08■□□□□ 0.16
HDAC5-208ENST00000588419 CLEC4DQ8WXI8 215 aa16.08■□□□□ 0.16
HDAC5-208ENST00000588419 NOC4LQ9BVI4 516 aaKnown RBP16.08■□□□□ 0.16
HDAC5-208ENST00000588419 UBA5Q9GZZ9 404 aa16.08■□□□□ 0.16
HDAC5-208ENST00000588419 WNT8AQ9H1J5 351 aa16.08■□□□□ 0.16
HDAC5-208ENST00000588419 NKX2-4Q9H2Z4 354 aa16.08■□□□□ 0.16
HDAC5-208ENST00000588419 RWDD1Q9H446 243 aaPredicted RBP16.08■□□□□ 0.16
HDAC5-208ENST00000588419 TRMT13Q9NUP7 481 aaKnown RBP16.08■□□□□ 0.16
HDAC5-208ENST00000588419 POLR3EQ9NVU0 708 aa16.08■□□□□ 0.16
HDAC5-208ENST00000588419 MSRAQ9UJ68 235 aa16.08■□□□□ 0.16
HDAC5-208ENST00000588419 Q9Y3F1 56 aa16.08■□□□□ 0.16
HDAC5-208ENST00000588419 CUL9Q8IWT3 2517 aa16.07■□□□□ 0.16
HDAC5-208ENST00000588419 CYP2C9P11712 490 aa16.07■□□□□ 0.16
HDAC5-208ENST00000588419 MORC4Q8TE76 937 aa16.07■□□□□ 0.16
HDAC5-208ENST00000588419 COPS5Q92905 334 aa16.07■□□□□ 0.16
HDAC5-208ENST00000588419 ALDH8A1Q9H2A2 487 aaPredicted RBP16.07■□□□□ 0.16
HDAC5-208ENST00000588419 KAT14Q9H8E8 782 aa16.07■□□□□ 0.16
HDAC5-208ENST00000588419 RAD50Q92878 1312 aa16.07■□□□□ 0.16
HDAC5-208ENST00000588419 TNKSO95271 1327 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 WDR19Q8NEZ3 1342 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 B4E1Z4 1266 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 KDM4AO75164 1064 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 PCP11498 1178 aaKnown RBP16.06■□□□□ 0.16
HDAC5-208ENST00000588419 IGFBP4P22692 258 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 RABGGTBP53611 331 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 RAB30Q15771 203 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 CDC37Q16543 378 aaPredicted RBP16.06■□□□□ 0.16
HDAC5-208ENST00000588419 BRDTQ58F21 947 aaPredicted RBP16.06■□□□□ 0.16
HDAC5-208ENST00000588419 RASIP1Q5U651 963 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 DEFB128Q7Z7B8 93 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 CHD1LQ86WJ1 897 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 IQCA1Q86XH1 822 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 PNMA1Q8ND90 353 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 HERVK_113Q902F9 699 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 TTC14Q96N46 770 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 MTG1Q9BT17 334 aaPredicted RBP16.06■□□□□ 0.16
HDAC5-208ENST00000588419 A0A0C4DFX4 3053 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 PTPRSQ13332 1948 aa16.06■□□□□ 0.16
HDAC5-208ENST00000588419 PRUNE2Q8WUY3 3088 aa16.05■□□□□ 0.16
HDAC5-208ENST00000588419 PURAQ00577 322 aaKnown RBP16.05■□□□□ 0.16
HDAC5-208ENST00000588419 CCDC85BQ15834 202 aaPredicted RBP16.05■□□□□ 0.16
HDAC5-208ENST00000588419 GPATCH4Q5T3I0 446 aaKnown RBP16.05■□□□□ 0.16
HDAC5-208ENST00000588419 PLEKHM2Q8IWE5 1019 aa16.05■□□□□ 0.16
HDAC5-208ENST00000588419 PRDM6Q9NQX0 595 aa16.05■□□□□ 0.16
HDAC5-208ENST00000588419 PNMA2Q9UL42 364 aa16.05■□□□□ 0.16
HDAC5-208ENST00000588419 B4DLN1 442 aa16.04■□□□□ 0.16
HDAC5-208ENST00000588419 IGHDP01880 384 aa16.04■□□□□ 0.16
HDAC5-208ENST00000588419 SNHG28P0DPA3 235 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms