RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ANO2Q9NQ90 1003 aa11.53□□□□□ -0.56
SKA2-208ENST00000583927 MAP3K20Q9NYL2 800 aaKnown RBP11.53□□□□□ -0.56
SKA2-208ENST00000583927 ZHX1Q9UKY1 873 aaPredicted RBP11.53□□□□□ -0.56
SKA2-208ENST00000583927 GNEQ9Y223 722 aaKnown RBP11.53□□□□□ -0.56
SKA2-208ENST00000583927 MRPL11Q9Y3B7 192 aaKnown RBP11.53□□□□□ -0.56
SKA2-208ENST00000583927 PTPDC1A2A3K4 754 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 ZBTB5O15062 677 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 ADCY6O43306 1168 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 SLC34A2O95436 690 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 PGK1P00558 417 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 ADCYAP1R1P41586 468 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 RTP1P59025 263 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 TMEM67Q5HYA8 995 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 TAPT1Q6NXT6 567 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 CATIPQ7Z7H3 387 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 FBXO11Q86XK2 927 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 MCF2L2Q86YR7 1114 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 NUP133Q8WUM0 1156 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 AMNQ9BXJ7 453 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 CPVLQ9H3G5 476 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 LY9Q9HBG7 655 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 ELP1O95163 1332 aa11.52□□□□□ -0.57
SKA2-208ENST00000583927 A0A1W2PQ45 241 aaPredicted RBP11.51□□□□□ -0.57
SKA2-208ENST00000583927 A0A1W2PQY0 241 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 CTAGE5O15320 804 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 EPB41L2O43491 1005 aaKnown RBP11.51□□□□□ -0.57
SKA2-208ENST00000583927 DDAH1O94760 285 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 ACLYP53396 1101 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 TNFAIP2Q03169 654 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 USH1GQ495M9 461 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 SLC30A10Q6XR72 485 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 SGMS1Q86VZ5 419 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 SKAP1Q86WV1 359 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 TOX2Q96NM4 488 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 SPZ1Q9BXG8 430 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 SEZ6LQ9BYH1 1024 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 SENP2Q9HC62 589 aa11.51□□□□□ -0.57
SKA2-208ENST00000583927 RBM27Q9P2N5 1060 aaKnown RBP11.51□□□□□ -0.57
SKA2-208ENST00000583927 PNMA6FA0A0J9YX94 578 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 SH2B2O14492 632 aaPredicted RBP11.5□□□□□ -0.57
SKA2-208ENST00000583927 NKRFO15226 690 aaKnown RBP eCLIP11.5□□□□□ -0.57
SKA2-208ENST00000583927 PRC1O43663 620 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 CYTH3O43739 400 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 CALM1P0DP23 149 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 CALM2P0DP24 149 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 CALM3P0DP25 149 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 KIF5BP33176 963 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 HSD17B4P51659 736 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 KRT32Q14532 448 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 KCNA10Q16322 511 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 DUSP28Q4G0W2 176 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 CHST3Q7LGC8 479 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 ANKRD33Q7Z3H0 272 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 ZNF654Q8IZM8 581 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 KCNB2Q92953 911 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 LENG1Q96BZ8 264 aaPredicted RBP11.5□□□□□ -0.57
SKA2-208ENST00000583927 IWS1Q96ST2 819 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 LZTS2Q9BRK4 669 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 MROH7Q68CQ1 1323 aa11.5□□□□□ -0.57
SKA2-208ENST00000583927 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.49□□□□□ -0.57
SKA2-208ENST00000583927 OPLAHO14841 1288 aa11.49□□□□□ -0.57
SKA2-208ENST00000583927 DHX16O60231 1041 aaKnown RBP11.49□□□□□ -0.57
SKA2-208ENST00000583927 CABYRO75952 493 aa11.49□□□□□ -0.57
SKA2-208ENST00000583927 ASGR1P07306 291 aa11.49□□□□□ -0.57
SKA2-208ENST00000583927 C6orf222P0C671 652 aaPredicted RBP11.49□□□□□ -0.57
SKA2-208ENST00000583927 SMPD1P17405 629 aa11.49□□□□□ -0.57
SKA2-208ENST00000583927 CALML3P27482 149 aa11.49□□□□□ -0.57
SKA2-208ENST00000583927 GNAQP50148 359 aa11.49□□□□□ -0.57
SKA2-208ENST00000583927 CDK7P50613 346 aa11.49□□□□□ -0.57
SKA2-208ENST00000583927 FXR1P51114 621 aaKnown RBP eCLIP11.49□□□□□ -0.57
SKA2-208ENST00000583927 ATN1P54259 1190 aaPredicted RBP11.49□□□□□ -0.57
SKA2-208ENST00000583927 SLC35G1Q2M3R5 365 aa11.49□□□□□ -0.57
SKA2-208ENST00000583927 TLK2Q86UE8 772 aa11.49□□□□□ -0.57
SKA2-208ENST00000583927 FBXO16Q8IX29 292 aaPredicted RBP11.49□□□□□ -0.57
SKA2-208ENST00000583927 CTCFLQ8NI51 663 aaPredicted RBP11.49□□□□□ -0.57
SKA2-208ENST00000583927 SYTL5Q8TDW5 730 aaPredicted RBP11.49□□□□□ -0.57
SKA2-208ENST00000583927 NSUN6Q8TEA1 469 aaKnown RBP11.49□□□□□ -0.57
SKA2-208ENST00000583927 GLT1D1Q96MS3 346 aa11.49□□□□□ -0.57
SKA2-208ENST00000583927 PURBQ96QR8 312 aaKnown RBP11.49□□□□□ -0.57
SKA2-208ENST00000583927 ZMYND8Q9ULU4 1186 aaPredicted RBP11.49□□□□□ -0.57
SKA2-208ENST00000583927 PCDHA1Q9Y5I3 950 aa11.49□□□□□ -0.57
SKA2-208ENST00000583927 KAT6AQ92794 2004 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 MYADML2A6NDP7 307 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 ZEB2O60315 1214 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 PPP1R11O60927 126 aaPredicted RBP11.48□□□□□ -0.57
SKA2-208ENST00000583927 HMGB1P09429 215 aaKnown RBP11.48□□□□□ -0.57
SKA2-208ENST00000583927 MAGEA10P43363 369 aaPredicted RBP11.48□□□□□ -0.57
SKA2-208ENST00000583927 EXOSC10Q01780 885 aaKnown RBP11.48□□□□□ -0.57
SKA2-208ENST00000583927 PDE4DQ08499 809 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 TRIM60Q495X7 471 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 GNASQ5JWF2 1037 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 FBXL16Q8N461 479 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 SLC43A3Q8NBI5 491 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 SCFD2Q8WU76 684 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 FERMT2Q96AC1 680 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 NEK1Q96PY6 1258 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 WDR11Q9BZH6 1224 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 AP5M1Q9H0R1 490 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 VAT1LQ9HCJ6 419 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms