RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 TLK2Q86UE8 772 aa9.13□□□□□ -0.95
CCDC47-205ENST00000582331 ERC1Q8IUD2 1116 aa9.13□□□□□ -0.95
CCDC47-205ENST00000582331 KIFC2Q96AC6 838 aa9.13□□□□□ -0.95
CCDC47-205ENST00000582331 SLC9A7Q96T83 725 aa9.13□□□□□ -0.95
CCDC47-205ENST00000582331 DNAJC2Q99543 621 aaKnown RBP9.13□□□□□ -0.95
CCDC47-205ENST00000582331 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCDC47-205ENST00000582331 SLC38A10Q9HBR0 1119 aa9.13□□□□□ -0.95
CCDC47-205ENST00000582331 ASB14A6NK59 587 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 PRR33A8MZF0 331 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 NDUFB10O96000 172 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 CYP2C9P11712 490 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 OAZ1P54368 228 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 CNTN2Q02246 1040 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 GRB10Q13322 594 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 PPP1R15BQ5SWA1 713 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 IQSEC1Q6DN90 963 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 FAM133AQ8N9E0 248 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCDC47-205ENST00000582331 ALDH8A1Q9H2A2 487 aaPredicted RBP9.12□□□□□ -0.95
CCDC47-205ENST00000582331 CD320Q9NPF0 282 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 NYAP2Q9P242 653 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 EXOC6BQ9Y2D4 811 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 Q9Y3F1 56 aa9.12□□□□□ -0.95
CCDC47-205ENST00000582331 PRRC2BQ5JSZ5 2229 aaKnown RBP9.11□□□□□ -0.95
CCDC47-205ENST00000582331 SOWAHBA6NEL2 793 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 FDX1P10109 184 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 SMPD1P17405 629 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 RFC2P35250 354 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 ADD2P35612 726 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 MRE11P49959 708 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 SLFNL1Q499Z3 407 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 ZKSCAN2Q63HK3 967 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 CTR9Q6PD62 1173 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 HERC6Q8IVU3 1022 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 UIMC1Q96RL1 719 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 FTOQ9C0B1 505 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC47-205ENST00000582331 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.11□□□□□ -0.953e-6■□□□□ 8.5
CCDC47-205ENST00000582331 MKNK2Q9HBH9 465 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 IL1RAPL2Q9NP60 686 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 PDGFCQ9NRA1 345 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 HOMER2Q9NSB8 354 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 TRMT13Q9NUP7 481 aaKnown RBP9.11□□□□□ -0.95
CCDC47-205ENST00000582331 LMCD1Q9NZU5 365 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 CLIP2Q9UDT6 1046 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 FEM1BQ9UK73 627 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 SLC4A4Q9Y6R1 1079 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 MCM3APO60318 1980 aa9.11□□□□□ -0.95
CCDC47-205ENST00000582331 TNKSO95271 1327 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 BAZ2AQ9UIF9 1905 aaKnown RBP9.1□□□□□ -0.95
CCDC47-205ENST00000582331 LPXNO60711 386 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 ARHGEF15O94989 841 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 ALADP13716 330 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 PTGS1P23219 599 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 CSPP1Q1MSJ5 1256 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 HSP90AB4PQ58FF6 505 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 TAPT1Q6NXT6 567 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 KIAA1211Q6ZU35 1233 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 GJD3Q8N144 294 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 CLASRPQ8N2M8 674 aaKnown RBP9.1□□□□□ -0.95
CCDC47-205ENST00000582331 RETREG2Q8NC44 543 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 ACAD9Q9H845 621 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 POLR3EQ9NVU0 708 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 COG6Q9Y2V7 657 aa9.1□□□□□ -0.95
CCDC47-205ENST00000582331 IFIT2P09913 472 aaKnown RBP9.09□□□□□ -0.95
CCDC47-205ENST00000582331 IQCF3P0C7M6 154 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 RASA1P20936 1047 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 FAM47CQ5HY64 1035 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 TMEM63BQ5T3F8 832 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 CEP85Q6P2H3 762 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 EEPD1Q7L9B9 569 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 FAM178BQ8IXR5 827 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 STK11IPQ8N1F8 1099 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 RHPN1Q8TCX5 695 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 OXER1Q8TDS5 423 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 BBXQ8WY36 941 aaPredicted RBP9.09□□□□□ -0.95
CCDC47-205ENST00000582331 MKL1Q969V6 931 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 SNX27Q96L92 541 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 UBE2ZQ9H832 354 aaPredicted RBP9.09□□□□□ -0.95
CCDC47-205ENST00000582331 A1CFQ9NQ94 594 aaKnown RBP9.09□□□□□ -0.95
CCDC47-205ENST00000582331 RNF146Q9NTX7 359 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 PAG1Q9NWQ8 432 aa9.09□□□□□ -0.95
CCDC47-205ENST00000582331 ARPP21Q9UBL0 812 aaPredicted RBP9.09□□□□□ -0.95
CCDC47-205ENST00000582331 ZBED9Q6R2W3 1325 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.08□□□□□ -0.96
CCDC47-205ENST00000582331 MINDY4BA8MYZ0 360 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 BAIAP3O94812 1187 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 MYL3P08590 195 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 BMP3P12645 472 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 SSTR3P32745 418 aaPredicted RBP9.08□□□□□ -0.96
CCDC47-205ENST00000582331 KCNJ6P48051 423 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 CPT1AP50416 773 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 LSM11P83369 360 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCDC47-205ENST00000582331 NHLH1Q02575 133 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 BFSP2Q13515 415 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 UBE3CQ15386 1083 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 TKFCQ3LXA3 575 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 LEXMQ3ZCV2 418 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 DUSP28Q4G0W2 176 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 SBK1Q52WX2 424 aa9.08□□□□□ -0.96
CCDC47-205ENST00000582331 SLFN13Q68D06 897 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms