RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 A0A1W2PQY0 241 aa19.32■□□□□ 0.68
SREBF1-219ENST00000580540 SH2B2O14492 632 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-219ENST00000580540 ZBTB5O15062 677 aa19.32■□□□□ 0.68
SREBF1-219ENST00000580540 KCNA10Q16322 511 aa19.32■□□□□ 0.68
SREBF1-219ENST00000580540 GNASQ5JWF2 1037 aa19.32■□□□□ 0.68
SREBF1-219ENST00000580540 TMTC2Q8N394 836 aa19.32■□□□□ 0.68
SREBF1-219ENST00000580540 RGS22Q8NE09 1264 aa19.32■□□□□ 0.68
SREBF1-219ENST00000580540 KLHDC9Q8NEP7 349 aa19.32■□□□□ 0.68
SREBF1-219ENST00000580540 CTCFLQ8NI51 663 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-219ENST00000580540 TSEN34Q9BSV6 310 aaKnown RBP19.32■□□□□ 0.68
SREBF1-219ENST00000580540 AP5M1Q9H0R1 490 aa19.32■□□□□ 0.68
SREBF1-219ENST00000580540 VTA1Q9NP79 307 aa19.32■□□□□ 0.68
SREBF1-219ENST00000580540 PCDHA1Q9Y5I3 950 aa19.32■□□□□ 0.68
SREBF1-219ENST00000580540 DYNC1LI2O43237 492 aaPredicted RBP19.31■□□□□ 0.68
SREBF1-219ENST00000580540 CFBP00751 764 aa19.31■□□□□ 0.68
SREBF1-219ENST00000580540 SMPD1P17405 629 aa19.31■□□□□ 0.68
SREBF1-219ENST00000580540 PTGS1P23219 599 aa19.31■□□□□ 0.68
SREBF1-219ENST00000580540 ACLYP53396 1101 aa19.31■□□□□ 0.68
SREBF1-219ENST00000580540 SLC35G1Q2M3R5 365 aa19.31■□□□□ 0.68
SREBF1-219ENST00000580540 TRIM60Q495X7 471 aa19.31■□□□□ 0.68
SREBF1-219ENST00000580540 IQSEC1Q6DN90 963 aa19.31■□□□□ 0.68
SREBF1-219ENST00000580540 TAPT1Q6NXT6 567 aa19.31■□□□□ 0.68
SREBF1-219ENST00000580540 RAB11FIP4Q86YS3 637 aa19.31■□□□□ 0.68
SREBF1-219ENST00000580540 NEK1Q96PY6 1258 aa19.31■□□□□ 0.68
SREBF1-219ENST00000580540 MTA3Q9BTC8 594 aa19.31■□□□□ 0.68
SREBF1-219ENST00000580540 PRKAG2Q9UGJ0 569 aa19.31■□□□□ 0.68
SREBF1-219ENST00000580540 BAZ2BQ9UIF8 2168 aaKnown RBP19.31■□□□□ 0.68
SREBF1-219ENST00000580540 LCTP09848 1927 aa19.31■□□□□ 0.68
SREBF1-219ENST00000580540 B4DLN1 442 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 PPP1R11O60927 126 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-219ENST00000580540 DDAH1O94760 285 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 RXRAP19793 462 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 KIF5BP33176 963 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 MAGEA10P43363 369 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-219ENST00000580540 MRPL12P52815 198 aaKnown RBP19.3■□□□□ 0.68
SREBF1-219ENST00000580540 GJA9P57773 515 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 BEX3Q00994 111 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 TMEM63BQ5T3F8 832 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 TLK2Q86UE8 772 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 RASEFQ8IZ41 740 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 PCSK9Q8NBP7 692 aaKnown RBP19.3■□□□□ 0.68
SREBF1-219ENST00000580540 DNERQ8NFT8 737 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 SYTL5Q8TDW5 730 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-219ENST00000580540 MORC4Q8TE76 937 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 MTMR8Q96EF0 704 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 TAAR1Q96RJ0 339 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 UPF3AQ9H1J1 476 aaKnown RBP19.3■□□□□ 0.68
SREBF1-219ENST00000580540 RIOX1Q9H6W3 641 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 PRDM5Q9NQX1 630 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-219ENST00000580540 STARD7Q9NQZ5 370 aa19.3■□□□□ 0.68
SREBF1-219ENST00000580540 LOC102724159A0A0B4J2E5 919 aa19.29■□□□□ 0.68
SREBF1-219ENST00000580540 MOXD2PA6NHM9 499 aa19.29■□□□□ 0.68
SREBF1-219ENST00000580540 CYTH3O43739 400 aa19.29■□□□□ 0.68
SREBF1-219ENST00000580540 ASGR1P07306 291 aa19.29■□□□□ 0.68
SREBF1-219ENST00000580540 MDM2Q00987 491 aaPredicted RBP19.29■□□□□ 0.68
SREBF1-219ENST00000580540 PWP2Q15269 919 aaKnown RBP19.29■□□□□ 0.68
SREBF1-219ENST00000580540 TCEANC2Q96MN5 208 aa19.29■□□□□ 0.68
SREBF1-219ENST00000580540 GLT1D1Q96MS3 346 aa19.29■□□□□ 0.68
SREBF1-219ENST00000580540 WDR11Q9BZH6 1224 aa19.29■□□□□ 0.68
SREBF1-219ENST00000580540 COL20A1Q9P218 1284 aa19.29■□□□□ 0.68
SREBF1-219ENST00000580540 GNEQ9Y223 722 aaKnown RBP19.29■□□□□ 0.68
SREBF1-219ENST00000580540 SLC12A7Q9Y666 1083 aa19.29■□□□□ 0.68
SREBF1-219ENST00000580540 PNMA6FA0A0J9YX94 578 aa19.28■□□□□ 0.68
SREBF1-219ENST00000580540 LIFRP42702 1097 aa19.28■□□□□ 0.68
SREBF1-219ENST00000580540 TLE2Q04725 743 aa19.28■□□□□ 0.68
SREBF1-219ENST00000580540 CCSAPQ6IQ19 270 aaPredicted RBP19.28■□□□□ 0.68
SREBF1-219ENST00000580540 SYNE3Q6ZMZ3 975 aa19.28■□□□□ 0.68
SREBF1-219ENST00000580540 NSUN6Q8TEA1 469 aaKnown RBP19.28■□□□□ 0.68
SREBF1-219ENST00000580540 RMDN3Q96TC7 470 aa19.28■□□□□ 0.68
SREBF1-219ENST00000580540 LBHD1Q9BQE6 289 aaPredicted RBP19.28■□□□□ 0.68
SREBF1-219ENST00000580540 TRIOBPQ9H2D6 2365 aa19.28■□□□□ 0.68
SREBF1-219ENST00000580540 PQBP1O60828 265 aaKnown RBP19.27■□□□□ 0.68
SREBF1-219ENST00000580540 CST5P28325 142 aaPredicted RBP19.27■□□□□ 0.68
SREBF1-219ENST00000580540 TRAF1Q13077 416 aa19.27■□□□□ 0.68
SREBF1-219ENST00000580540 KRT32Q14532 448 aa19.27■□□□□ 0.68
SREBF1-219ENST00000580540 SNX17Q15036 470 aa19.27■□□□□ 0.68
SREBF1-219ENST00000580540 FSCN1Q16658 493 aaKnown RBP19.27■□□□□ 0.68
SREBF1-219ENST00000580540 ADCK5Q3MIX3 580 aa19.27■□□□□ 0.68
SREBF1-219ENST00000580540 ARHGEF16Q5VV41 709 aa19.27■□□□□ 0.68
SREBF1-219ENST00000580540 ERICH6BQ5W0A0 696 aa19.27■□□□□ 0.68
SREBF1-219ENST00000580540 CMTR1Q8N1G2 835 aaKnown RBP19.27■□□□□ 0.68
SREBF1-219ENST00000580540 MAP3K14Q99558 947 aa19.27■□□□□ 0.68
SREBF1-219ENST00000580540 GDF15Q99988 308 aa19.27■□□□□ 0.68
SREBF1-219ENST00000580540 CTAGE5O15320 804 aa19.26■□□□□ 0.67
SREBF1-219ENST00000580540 PLEKHA8P1O95397 391 aa19.26■□□□□ 0.67
SREBF1-219ENST00000580540 CALM1P0DP23 149 aa19.26■□□□□ 0.67
SREBF1-219ENST00000580540 CALM2P0DP24 149 aa19.26■□□□□ 0.67
SREBF1-219ENST00000580540 CALM3P0DP25 149 aa19.26■□□□□ 0.67
SREBF1-219ENST00000580540 EIF2AK2P19525 551 aaKnown RBP19.26■□□□□ 0.67
SREBF1-219ENST00000580540 EDNRBP24530 442 aa19.26■□□□□ 0.67
SREBF1-219ENST00000580540 HOXA13P31271 388 aaPredicted RBP19.26■□□□□ 0.67
SREBF1-219ENST00000580540 GNAQP50148 359 aa19.26■□□□□ 0.67
SREBF1-219ENST00000580540 DUSP28Q4G0W2 176 aa19.26■□□□□ 0.67
SREBF1-219ENST00000580540 SEPT14Q6ZU15 432 aa19.26■□□□□ 0.67
SREBF1-219ENST00000580540 DHX32Q7L7V1 743 aaKnown RBP19.26■□□□□ 0.67
SREBF1-219ENST00000580540 MICU3Q86XE3 530 aa19.26■□□□□ 0.67
SREBF1-219ENST00000580540 RRP36Q96EU6 259 aaKnown RBP19.26■□□□□ 0.67
SREBF1-219ENST00000580540 LZTS2Q9BRK4 669 aa19.26■□□□□ 0.67
SREBF1-219ENST00000580540 UBE2OQ9C0C9 1292 aaKnown RBP19.26■□□□□ 0.67
SREBF1-219ENST00000580540 MAF1Q9H063 256 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms