RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 KIAA1211Q6ZU35 1233 aa14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 ZNF365Q70YC5 407 aa14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 ZNF589Q86UQ0 364 aaPredicted RBP14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 FBXO16Q8IX29 292 aaPredicted RBP14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 PURBQ96QR8 312 aaKnown RBP14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 GPCPD1Q9NPB8 672 aa14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 VCANP13611 3396 aa14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 LRRC37A2A6NM11 1700 aa14.78□□□□□ -0.04
SMARCD2-207ENST00000578234 FRMPD2Q68DX3 1309 aaPredicted RBP14.77□□□□□ -0.04
SMARCD2-207ENST00000578234 CCDC171Q6TFL3 1326 aa14.77□□□□□ -0.04
SMARCD2-207ENST00000578234 LCTP09848 1927 aa14.77□□□□□ -0.04
SMARCD2-207ENST00000578234 NFIBO00712 420 aa14.77□□□□□ -0.05
SMARCD2-207ENST00000578234 SNHG28P0DPA3 235 aa14.77□□□□□ -0.05
SMARCD2-207ENST00000578234 PBX2P40425 430 aa14.77□□□□□ -0.05
SMARCD2-207ENST00000578234 ALDH5A1P51649 535 aaPredicted RBP14.77□□□□□ -0.05
SMARCD2-207ENST00000578234 MFAP1P55081 439 aaKnown RBP14.77□□□□□ -0.05
SMARCD2-207ENST00000578234 CHMP4BP1P59074 171 aa14.77□□□□□ -0.05
SMARCD2-207ENST00000578234 DUSP28Q4G0W2 176 aa14.77□□□□□ -0.05
SMARCD2-207ENST00000578234 AKNAD1Q5T1N1 836 aa14.77□□□□□ -0.05
SMARCD2-207ENST00000578234 TMEM63BQ5T3F8 832 aa14.77□□□□□ -0.05
SMARCD2-207ENST00000578234 MFSD6Q6ZSS7 791 aa14.77□□□□□ -0.05
SMARCD2-207ENST00000578234 HIPK3Q9H422 1215 aa14.77□□□□□ -0.05
SMARCD2-207ENST00000578234 IL23AQ9NPF7 189 aa14.77□□□□□ -0.05
SMARCD2-207ENST00000578234 MSRAQ9UJ68 235 aa14.77□□□□□ -0.05
SMARCD2-207ENST00000578234 WDR19Q8NEZ3 1342 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 RBM47A0AV96 593 aaKnown RBP14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 TRIM6-TRIM34B2RNG4 842 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 PTGS1P23219 599 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 NT5C2P49902 561 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 CCL23P55773 120 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 HAND2P61296 217 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 ZNF543Q08ER8 600 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 CHD1LQ86WJ1 897 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 MICALL1Q8N3F8 863 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 CLEC4DQ8WXI8 215 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 HERVK_113Q902F9 699 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 SYMPKQ92797 1274 aaKnown RBP14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 RILPL2Q969X0 211 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 WDR11Q9BZH6 1224 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 MTIF3Q9H2K0 278 aaKnown RBP14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 RNF41Q9H4P4 317 aaPredicted RBP14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 PRDM12Q9H4Q4 367 aa14.76□□□□□ -0.05
SMARCD2-207ENST00000578234 PTPDC1A2A3K4 754 aa14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 ZBBXA8MT70 800 aa14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 B4GALT4O60513 344 aa14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 FGBP02675 491 aa14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 SDSP20132 328 aa14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 PSMC6P62333 389 aa14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 NUCB1Q02818 461 aa14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 GPATCH4Q5T3I0 446 aaKnown RBP14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 RNF207Q6ZRF8 634 aa14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 OTOP2Q7RTS6 562 aa14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 IL27Q8NEV9 243 aa14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 PBX4Q9BYU1 374 aa14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 OSBPL3Q9H4L5 887 aa14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 POLR3EQ9NVU0 708 aa14.75□□□□□ -0.05
SMARCD2-207ENST00000578234 ZNF213O14771 459 aa14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 MYL3P08590 195 aa14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 CALML3P27482 149 aa14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 CPT1AP50416 773 aa14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 RPS6P62753 249 aaKnown RBP14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 SLC30A10Q6XR72 485 aa14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 DGKHQ86XP1 1220 aa14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 TBC1D10CQ8IV04 446 aa14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 DNERQ8NFT8 737 aa14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 ESR2Q92731 530 aa14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 MPHOSPH6Q99547 160 aaKnown RBP14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 NOC4LQ9BVI4 516 aaKnown RBP14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 MAF1Q9H063 256 aa14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 TRPV6Q9H1D0 765 aa14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 PRDM6Q9NQX0 595 aa14.74□□□□□ -0.05
SMARCD2-207ENST00000578234 CHD9Q3L8U1 2897 aa14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 UMODL1Q5DID0 1318 aa14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 B4DLN1 442 aa14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 EDNRBP24530 442 aa14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 MRPL12P52815 198 aaKnown RBP14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 PURAQ00577 322 aaKnown RBP14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 PDE4DQ08499 809 aa14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 CCDC178Q5BJE1 867 aa14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 FAM47CQ5HY64 1035 aa14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 RPUSD2Q8IZ73 545 aaKnown RBP14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 USP38Q8NB14 1042 aa14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 RGS22Q8NE09 1264 aa14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 CCDC136Q96JN2 1154 aa14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 WNT8AQ9H1J5 351 aa14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 ALDH8A1Q9H2A2 487 aaPredicted RBP14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 NKX2-4Q9H2Z4 354 aa14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 SLC28A3Q9HAS3 691 aa14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 GPHNQ9NQX3 736 aaPredicted RBP14.73□□□□□ -0.05
SMARCD2-207ENST00000578234 GBF1Q92538 1859 aa14.72□□□□□ -0.05
SMARCD2-207ENST00000578234 NKRFO15226 690 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMARCD2-207ENST00000578234 SUPT20HL2P0C7V6 817 aa14.72□□□□□ -0.05
SMARCD2-207ENST00000578234 RAB30Q15771 203 aa14.72□□□□□ -0.05
SMARCD2-207ENST00000578234 BRDTQ58F21 947 aaPredicted RBP14.72□□□□□ -0.05
SMARCD2-207ENST00000578234 PLEKHM2Q8IWE5 1019 aa14.72□□□□□ -0.05
SMARCD2-207ENST00000578234 SCFD2Q8WU76 684 aa14.72□□□□□ -0.05
SMARCD2-207ENST00000578234 CXXC1Q9P0U4 656 aaPredicted RBP14.72□□□□□ -0.05
SMARCD2-207ENST00000578234 NEDD4P46934 1319 aa14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 A6NJR5 290 aa14.71□□□□□ -0.05
SMARCD2-207ENST00000578234 KPNA6O60684 536 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms