RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 STAMQ92783 540 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 TIGD1Q96MW7 591 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 OSBPL5Q9H0X9 879 aaPredicted RBP6.09□□□□□ -1.44
VAPA-203ENST00000577539 IL21Q9HBE4 155 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 NFE2L3Q9Y4A8 694 aa6.09□□□□□ -1.44
VAPA-203ENST00000577539 TRIM75PA6NK02 468 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 KIF2AO00139 706 aaPredicted RBP6.08□□□□□ -1.44
VAPA-203ENST00000577539 CDK2AP1O14519 115 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 OPLAHO14841 1288 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 CTIFO43310 598 aaKnown RBP6.08□□□□□ -1.44
VAPA-203ENST00000577539 SLU7O95391 586 aaKnown RBP6.08□□□□□ -1.44
VAPA-203ENST00000577539 POSTNQ15063 836 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 Q6ZVU0 165 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 USP49Q70CQ1 688 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 MCF2L2Q86YR7 1114 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 CRACR2BQ8N4Y2 399 aaPredicted RBP6.08□□□□□ -1.44
VAPA-203ENST00000577539 MNS1Q8NEH6 495 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 CPLX3Q8WVH0 158 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 PPP1R13BQ96KQ4 1090 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 CGNQ9P2M7 1197 aaKnown RBP6.08□□□□□ -1.44
VAPA-203ENST00000577539 ZNF652Q9Y2D9 606 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 TACC3Q9Y6A5 838 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 IKBKBO14920 756 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 ZNF174Q15697 407 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 E4F1Q66K89 784 aaPredicted RBP6.08□□□□□ -1.44
VAPA-203ENST00000577539 FOXP4Q8IVH2 680 aaPredicted RBP6.08□□□□□ -1.44
VAPA-203ENST00000577539 RASSF8Q8NHQ8 419 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 MAP3K14Q99558 947 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 BRMS1Q9HCU9 246 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 CYLDQ9NQC7 956 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 RAB6BQ9NRW1 208 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 TFCP2L1Q9NZI6 479 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 ZHX1Q9UKY1 873 aaPredicted RBP6.08□□□□□ -1.44
VAPA-203ENST00000577539 HCN2Q9UL51 889 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 CEP131Q9UPN4 1083 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 BCL9O00512 1426 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 PKD1L3Q7Z443 1732 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 PDE4BQ07343 736 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 ITPK1Q13572 414 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 INTS5Q6P9B9 1019 aaKnown RBP6.08□□□□□ -1.44
VAPA-203ENST00000577539 NOP9Q86U38 636 aaKnown RBP6.08□□□□□ -1.44
VAPA-203ENST00000577539 STAG1Q8WVM7 1258 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 ANKRD7Q92527 254 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 BPIFA3Q9BQP9 254 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 CSRNP2Q9H175 543 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 TUBE1Q9UJT0 475 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 HPSEQ9Y251 543 aa6.08□□□□□ -1.44
VAPA-203ENST00000577539 CASP1P29466 404 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 TOB1P50616 345 aaPredicted RBP6.07□□□□□ -1.44
VAPA-203ENST00000577539 FAM47AQ5JRC9 791 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 ADGRA1Q86SQ6 560 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 CTCFLQ8NI51 663 aaPredicted RBP6.07□□□□□ -1.44
VAPA-203ENST00000577539 CUEDC1Q9NWM3 386 aaPredicted RBP6.07□□□□□ -1.44
VAPA-203ENST00000577539 DACH1Q9UI36 760 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 MAN1B1Q9UKM7 699 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 KCNQ2O43526 872 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 CAMTA2O94983 1202 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 PLEKHA8P1O95397 391 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 FSHRP23945 695 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 ADKP55263 362 aaKnown RBP6.07□□□□□ -1.44
VAPA-203ENST00000577539 NLRP5P59047 1200 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 ERCC6LQ2NKX8 1250 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 AATFQ9NY61 560 aaKnown RBP eCLIP6.07□□□□□ -1.44
VAPA-203ENST00000577539 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.07□□□□□ -1.44
VAPA-203ENST00000577539 VWA3AA6NCI4 1184 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 PES1O00541 588 aaKnown RBP6.07□□□□□ -1.44
VAPA-203ENST00000577539 COBLO75128 1261 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 KRT2P35908 639 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 PPP1R26Q5T8A7 1209 aaPredicted RBP6.07□□□□□ -1.44
VAPA-203ENST00000577539 SMAP1Q8IYB5 467 aaPredicted RBP6.07□□□□□ -1.44
VAPA-203ENST00000577539 ERO1AQ96HE7 468 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 EPSTI1Q96J88 318 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 FOXP1Q9H334 677 aaPredicted RBP6.07□□□□□ -1.44
VAPA-203ENST00000577539 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.07□□□□□ -1.44
VAPA-203ENST00000577539 SAMSN1Q9NSI8 373 aaKnown RBP6.07□□□□□ -1.44
VAPA-203ENST00000577539 ABCC6O95255 1503 aa6.07□□□□□ -1.44
VAPA-203ENST00000577539 STK36Q9NRP7 1315 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 BAZ2BQ9UIF8 2168 aaKnown RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 LAMA4Q16363 1823 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 LAMB4A4D0S4 1761 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 TSPY2A6NKD2 308 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 CCP110O43303 1012 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 PPFIA4O75335 1185 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 IRS1P35568 1242 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 GNG11P61952 73 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 DHX8Q14562 1220 aaKnown RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 TEAD4Q15561 434 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 TRIP4Q15650 581 aaPredicted RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 ERMP1Q7Z2K6 904 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 SMYD4Q8IYR2 804 aaPredicted RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 ZSCAN10Q96SZ4 725 aaPredicted RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 FBXO2Q9UK22 296 aaPredicted RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 GLI3P10071 1580 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 RTL9Q8NET4 1388 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 NMT2O60551 498 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 NTSR2O95665 410 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 ADH1CP00326 375 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 GJA8P48165 433 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 ETF1P62495 437 aaKnown RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 KARSQ15046 597 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms