RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 KIF5BP33176 963 aa30.65■■■□□ 2.5
PPP4R1-204ENST00000577393 HSPA4P34932 840 aa30.65■■■□□ 2.5
PPP4R1-204ENST00000577393 PWP2Q15269 919 aaKnown RBP30.65■■■□□ 2.5
PPP4R1-204ENST00000577393 FBXO16Q8IX29 292 aaPredicted RBP30.65■■■□□ 2.5
PPP4R1-204ENST00000577393 TCEANC2Q96MN5 208 aa30.65■■■□□ 2.5
PPP4R1-204ENST00000577393 SLC12A7Q9Y666 1083 aa30.65■■■□□ 2.5
PPP4R1-204ENST00000577393 SYNRGQ9UMZ2 1314 aa30.65■■■□□ 2.5
PPP4R1-204ENST00000577393 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.64■■■□□ 2.5
PPP4R1-204ENST00000577393 ADCYAP1R1P41586 468 aa30.64■■■□□ 2.5
PPP4R1-204ENST00000577393 ATN1P54259 1190 aaPredicted RBP30.64■■■□□ 2.5
PPP4R1-204ENST00000577393 SGMS1Q86VZ5 419 aa30.64■■■□□ 2.5
PPP4R1-204ENST00000577393 DNERQ8NFT8 737 aa30.64■■■□□ 2.5
PPP4R1-204ENST00000577393 PDGFCQ9NRA1 345 aa30.64■■■□□ 2.5
PPP4R1-204ENST00000577393 PCDHA1Q9Y5I3 950 aa30.64■■■□□ 2.5
PPP4R1-204ENST00000577393 DNAH12Q6ZR08 3092 aa30.63■■■□□ 2.49
PPP4R1-204ENST00000577393 CALM1P0DP23 149 aa30.63■■■□□ 2.49
PPP4R1-204ENST00000577393 CALM2P0DP24 149 aa30.63■■■□□ 2.49
PPP4R1-204ENST00000577393 CALM3P0DP25 149 aa30.63■■■□□ 2.49
PPP4R1-204ENST00000577393 RXRAP19793 462 aa30.63■■■□□ 2.49
PPP4R1-204ENST00000577393 TNFAIP2Q03169 654 aa30.63■■■□□ 2.49
PPP4R1-204ENST00000577393 TAPT1Q6NXT6 567 aa30.63■■■□□ 2.49
PPP4R1-204ENST00000577393 RAB11FIP4Q86YS3 637 aa30.63■■■□□ 2.49
PPP4R1-204ENST00000577393 SYTL5Q8TDW5 730 aaPredicted RBP30.63■■■□□ 2.49
PPP4R1-204ENST00000577393 FERMT2Q96AC1 680 aa30.63■■■□□ 2.49
PPP4R1-204ENST00000577393 VTA1Q9NP79 307 aa30.63■■■□□ 2.49
PPP4R1-204ENST00000577393 PHF24Q9UPV7 400 aa30.63■■■□□ 2.49
PPP4R1-204ENST00000577393 PNMA6FA0A0J9YX94 578 aa30.62■■■□□ 2.49
PPP4R1-204ENST00000577393 KLHDC9Q8NEP7 349 aa30.62■■■□□ 2.49
PPP4R1-204ENST00000577393 PIBF1Q8WXW3 757 aa30.62■■■□□ 2.49
PPP4R1-204ENST00000577393 SNX14Q9Y5W7 946 aa30.62■■■□□ 2.49
PPP4R1-204ENST00000577393 LRRC37A2A6NM11 1700 aa30.61■■■□□ 2.49
PPP4R1-204ENST00000577393 OPLAHO14841 1288 aa30.61■■■□□ 2.49
PPP4R1-204ENST00000577393 HMGB1P09429 215 aaKnown RBP30.61■■■□□ 2.49
PPP4R1-204ENST00000577393 GNAQP50148 359 aa30.61■■■□□ 2.49
PPP4R1-204ENST00000577393 IRX5P78411 483 aaPredicted RBP30.61■■■□□ 2.49
PPP4R1-204ENST00000577393 NOL8Q76FK4 1167 aaKnown RBP30.61■■■□□ 2.49
PPP4R1-204ENST00000577393 TAAR1Q96RJ0 339 aa30.61■■■□□ 2.49
PPP4R1-204ENST00000577393 LZTS2Q9BRK4 669 aa30.61■■■□□ 2.49
PPP4R1-204ENST00000577393 SPZ1Q9BXG8 430 aa30.61■■■□□ 2.49
PPP4R1-204ENST00000577393 UPF3AQ9H1J1 476 aaKnown RBP30.61■■■□□ 2.49
PPP4R1-204ENST00000577393 COL20A1Q9P218 1284 aa30.61■■■□□ 2.49
PPP4R1-204ENST00000577393 MYADML2A6NDP7 307 aa30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 PLEKHA8P1O95397 391 aa30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 CFBP00751 764 aa30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 EDNRBP24530 442 aa30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 SMARCA1P28370 1054 aa30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 GJA9P57773 515 aa30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 PDE4DQ08499 809 aa30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 TRAF1Q13077 416 aa30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 IQSEC1Q6DN90 963 aa30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 SLC39A5Q6ZMH5 540 aa30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 MPHOSPH6Q99547 160 aaKnown RBP30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 TSEN34Q9BSV6 310 aaKnown RBP30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 SPC25Q9HBM1 224 aa30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 ZMYND8Q9ULU4 1186 aaPredicted RBP30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 GNEQ9Y223 722 aaKnown RBP30.6■■■□□ 2.49
PPP4R1-204ENST00000577393 C6orf222P0C671 652 aaPredicted RBP30.59■■■□□ 2.49
PPP4R1-204ENST00000577393 SMPD1P17405 629 aa30.59■■■□□ 2.49
PPP4R1-204ENST00000577393 CCSAPQ6IQ19 270 aaPredicted RBP30.59■■■□□ 2.49
PPP4R1-204ENST00000577393 SRBD1Q8N5C6 995 aaKnown RBP30.59■■■□□ 2.49
PPP4R1-204ENST00000577393 FANCBQ8NB91 859 aa30.59■■■□□ 2.49
PPP4R1-204ENST00000577393 JAKMIP1Q96N16 626 aaKnown RBP30.59■■■□□ 2.49
PPP4R1-204ENST00000577393 B4DLN1 442 aa30.58■■■□□ 2.49
PPP4R1-204ENST00000577393 CPA1P15085 419 aa30.58■■■□□ 2.49
PPP4R1-204ENST00000577393 CST5P28325 142 aaPredicted RBP30.58■■■□□ 2.49
PPP4R1-204ENST00000577393 HSD17B4P51659 736 aa30.58■■■□□ 2.49
PPP4R1-204ENST00000577393 MRPL12P52815 198 aaKnown RBP30.58■■■□□ 2.49
PPP4R1-204ENST00000577393 KCNA10Q16322 511 aa30.58■■■□□ 2.49
PPP4R1-204ENST00000577393 SYNE3Q6ZMZ3 975 aa30.58■■■□□ 2.49
PPP4R1-204ENST00000577393 MICU3Q86XE3 530 aa30.58■■■□□ 2.49
PPP4R1-204ENST00000577393 EPB41L2O43491 1005 aaKnown RBP30.57■■■□□ 2.48
PPP4R1-204ENST00000577393 PTGS1P23219 599 aa30.57■■■□□ 2.48
PPP4R1-204ENST00000577393 ACLYP53396 1101 aa30.57■■■□□ 2.48
PPP4R1-204ENST00000577393 RTP1P59025 263 aa30.57■■■□□ 2.48
PPP4R1-204ENST00000577393 GHRHRQ02643 423 aa30.57■■■□□ 2.48
PPP4R1-204ENST00000577393 TMEM63BQ5T3F8 832 aa30.57■■■□□ 2.48
PPP4R1-204ENST00000577393 APOA5Q6Q788 366 aa30.57■■■□□ 2.48
PPP4R1-204ENST00000577393 CMTR1Q8N1G2 835 aaKnown RBP30.57■■■□□ 2.48
PPP4R1-204ENST00000577393 NSUN6Q8TEA1 469 aaKnown RBP30.57■■■□□ 2.48
PPP4R1-204ENST00000577393 RRP36Q96EU6 259 aaKnown RBP30.57■■■□□ 2.48
PPP4R1-204ENST00000577393 RMDN3Q96TC7 470 aa30.57■■■□□ 2.48
PPP4R1-204ENST00000577393 BRPF3Q9ULD4 1205 aa30.57■■■□□ 2.48
PPP4R1-204ENST00000577393 A0A1W2PQ45 241 aaPredicted RBP30.56■■■□□ 2.48
PPP4R1-204ENST00000577393 A0A1W2PQY0 241 aa30.56■■■□□ 2.48
PPP4R1-204ENST00000577393 CTAGE5O15320 804 aa30.56■■■□□ 2.48
PPP4R1-204ENST00000577393 CHRDL2Q6WN34 429 aa30.56■■■□□ 2.48
PPP4R1-204ENST00000577393 TLK2Q86UE8 772 aa30.56■■■□□ 2.48
PPP4R1-204ENST00000577393 COLQQ9Y215 455 aaPredicted RBP30.56■■■□□ 2.48
PPP4R1-204ENST00000577393 RBM47A0AV96 593 aaKnown RBP30.55■■■□□ 2.48
PPP4R1-204ENST00000577393 MOXD2PA6NHM9 499 aa30.55■■■□□ 2.48
PPP4R1-204ENST00000577393 DYNC1LI2O43237 492 aaPredicted RBP30.55■■■□□ 2.48
PPP4R1-204ENST00000577393 SYN1P17600 705 aa30.55■■■□□ 2.48
PPP4R1-204ENST00000577393 NKX3-2P78367 333 aa30.55■■■□□ 2.48
PPP4R1-204ENST00000577393 SNX17Q15036 470 aa30.55■■■□□ 2.48
PPP4R1-204ENST00000577393 GNASQ5JWF2 1037 aa30.55■■■□□ 2.48
PPP4R1-204ENST00000577393 BLOC1S2Q6QNY1 142 aa30.55■■■□□ 2.48
PPP4R1-204ENST00000577393 SAMD3Q8N6K7 520 aa30.55■■■□□ 2.48
PPP4R1-204ENST00000577393 PCSK9Q8NBP7 692 aaKnown RBP30.55■■■□□ 2.48
PPP4R1-204ENST00000577393 USP26Q9BXU7 913 aa30.55■■■□□ 2.48
PPP4R1-204ENST00000577393 WDR11Q9BZH6 1224 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms