RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 MORC2Q9Y6X9 1032 aaPredicted RBP7.99□□□□□ -1.13
SMG1-215ENST00000568239 SMC2O95347 1197 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 CLK2P49760 499 aaKnown RBP7.99□□□□□ -1.13
SMG1-215ENST00000568239 MDM2Q00987 491 aaPredicted RBP7.99□□□□□ -1.13
SMG1-215ENST00000568239 RRAGBQ5VZM2 374 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 DLK2Q6UY11 383 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 DHX40Q8IX18 779 aaKnown RBP7.99□□□□□ -1.13
SMG1-215ENST00000568239 CPXCR1Q8N123 301 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 GJA10Q969M2 543 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 ANO3Q9BYT9 981 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 CCDC39Q9UFE4 941 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 MYH7BA7E2Y1 1941 aa7.99□□□□□ -1.13
SMG1-215ENST00000568239 MEIS2O14770 477 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 PRPHP41219 470 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 DHX8Q14562 1220 aaKnown RBP7.98□□□□□ -1.13
SMG1-215ENST00000568239 TMEM266Q2M3C6 531 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 DISC1Q9NRI5 854 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 FEM1BQ9UK73 627 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 MAN1B1Q9UKM7 699 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 ATAD5Q96QE3 1844 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 SBF1O95248 1867 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 FLOT1O75955 427 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 GPR162Q16538 588 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 CABP7Q86V35 215 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 FAM160B2Q86V87 743 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 HOOK2Q96ED9 719 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 PYM1Q9BRP8 204 aaKnown RBP7.98□□□□□ -1.13
SMG1-215ENST00000568239 TTC12Q9H892 705 aaPredicted RBP7.98□□□□□ -1.13
SMG1-215ENST00000568239 CTDP1Q9Y5B0 961 aaPredicted RBP7.98□□□□□ -1.13
SMG1-215ENST00000568239 POTEMA6NI47 508 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 ZNF76P36508 570 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 TPM4P67936 248 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 DPY19L2Q6NUT2 758 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 TBC1D5Q92609 795 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 CDK5RAP3Q96JB5 506 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 RAB34Q9BZG1 259 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 LRWD1Q9UFC0 647 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 ZHX2Q9Y6X8 837 aa7.98□□□□□ -1.13
SMG1-215ENST00000568239 DICER1Q9UPY3 1922 aaKnown RBP7.97□□□□□ -1.13
SMG1-215ENST00000568239 EDIL3O43854 480 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 BMP6P22004 513 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 SUPT20HL1Q3ZLR7 823 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 PRR16Q569H4 304 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 HSP90AA4PQ58FG1 418 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 PPP4R3AQ6IN85 833 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 KLHL10Q6JEL2 608 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 SULF1Q8IWU6 871 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 SCYL3Q8IZE3 742 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 LPAR1Q92633 364 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 DCPSQ96C86 337 aaKnown RBP7.97□□□□□ -1.13
SMG1-215ENST00000568239 AGBL1Q96MI9 1066 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 HOMER2Q9NSB8 354 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 CCPG1Q9ULG6 757 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 SMTNL1A8MU46 457 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 UBXN2AP68543 259 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 ARHGAP4P98171 946 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 TRAF1Q13077 416 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 AP3B2Q13367 1082 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 CUL4BQ13620 913 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 E2F4Q16254 413 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 LDHDQ86WU2 507 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 ELOA2Q8IYF1 753 aaPredicted RBP7.97□□□□□ -1.13
SMG1-215ENST00000568239 PRPF38AQ8NAV1 312 aaKnown RBP7.97□□□□□ -1.13
SMG1-215ENST00000568239 CALML4Q96GE6 196 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 AK8Q96MA6 479 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 P2RX7Q99572 595 aaKnown RBP7.97□□□□□ -1.13
SMG1-215ENST00000568239 SLF1Q9BQI6 1058 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 KIAA1683Q9H0B3 1180 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 RANBP17Q9H2T7 1088 aaKnown RBP7.97□□□□□ -1.13
SMG1-215ENST00000568239 AS3MTQ9HBK9 375 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 ADARB2Q9NS39 739 aaKnown RBP7.97□□□□□ -1.13
SMG1-215ENST00000568239 PCDHA12Q9UN75 941 aa7.97□□□□□ -1.13
SMG1-215ENST00000568239 ADM5C9JUS6 153 aa7.96□□□□□ -1.13
SMG1-215ENST00000568239 GCOM1H8Y6P7 765 aaPredicted RBP7.96□□□□□ -1.13
SMG1-215ENST00000568239 OPLAHO14841 1288 aa7.96□□□□□ -1.13
SMG1-215ENST00000568239 WDR46O15213 610 aaKnown RBP7.96□□□□□ -1.13
SMG1-215ENST00000568239 POLR2MP0CAP2 368 aa7.96□□□□□ -1.13
SMG1-215ENST00000568239 GCFC2P16383 781 aaKnown RBP7.96□□□□□ -1.13
SMG1-215ENST00000568239 PTPRAP18433 802 aa7.96□□□□□ -1.13
SMG1-215ENST00000568239 PLCG1P19174 1290 aa7.96□□□□□ -1.13
SMG1-215ENST00000568239 VCAM1P19320 739 aa7.96□□□□□ -1.13
SMG1-215ENST00000568239 MSNP26038 577 aaKnown RBP7.96□□□□□ -1.13
SMG1-215ENST00000568239 HMGCS2P54868 508 aa7.96□□□□□ -1.13
SMG1-215ENST00000568239 ORC2Q13416 577 aaPredicted RBP7.96□□□□□ -1.13
SMG1-215ENST00000568239 PDXDC2PQ6P474 469 aa7.96□□□□□ -1.13
SMG1-215ENST00000568239 SMYD4Q8IYR2 804 aaPredicted RBP7.96□□□□□ -1.13
SMG1-215ENST00000568239 ZNF280CQ8ND82 737 aa7.96□□□□□ -1.13
SMG1-215ENST00000568239 ZFP91Q96JP5 570 aaPredicted RBP7.96□□□□□ -1.13
SMG1-215ENST00000568239 ZNF830Q96NB3 372 aaPredicted RBP7.96□□□□□ -1.13
SMG1-215ENST00000568239 MTMR9Q96QG7 549 aa7.96□□□□□ -1.13
SMG1-215ENST00000568239 CCSER1Q9C0I3 900 aa7.96□□□□□ -1.13
SMG1-215ENST00000568239 RPAP3Q9H6T3 665 aaPredicted RBP7.96□□□□□ -1.13
SMG1-215ENST00000568239 MRPL11Q9Y3B7 192 aaKnown RBP7.96□□□□□ -1.13
SMG1-215ENST00000568239 ESPNB1AK53 854 aa7.96□□□□□ -1.14
SMG1-215ENST00000568239 FOSP01100 380 aaPredicted RBP7.96□□□□□ -1.14
SMG1-215ENST00000568239 ALAS1P13196 640 aa7.96□□□□□ -1.14
SMG1-215ENST00000568239 SARSP49591 514 aaKnown RBP7.96□□□□□ -1.14
SMG1-215ENST00000568239 USP11P51784 963 aa7.96□□□□□ -1.14
SMG1-215ENST00000568239 USP14P54578 494 aa7.96□□□□□ -1.14
SMG1-215ENST00000568239 BACE1P56817 501 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms