RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 CCNJLQ8IV13 435 aa10.97□□□□□ -0.65
CFDP1-206ENST00000566254 C3orf58Q8NDZ4 430 aa10.97□□□□□ -0.65
CFDP1-206ENST00000566254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.97□□□□□ -0.65
CFDP1-206ENST00000566254 SPACA7Q96KW9 195 aa10.97□□□□□ -0.65
CFDP1-206ENST00000566254 TEPSINQ96N21 525 aa10.97□□□□□ -0.65
CFDP1-206ENST00000566254 TMEM39BQ9GZU3 492 aa10.97□□□□□ -0.65
CFDP1-206ENST00000566254 IGFLR1Q9H665 355 aa10.97□□□□□ -0.65
CFDP1-206ENST00000566254 TDRD3Q9H7E2 651 aaKnown RBP10.97□□□□□ -0.65
CFDP1-206ENST00000566254 ABCB6Q9NP58 842 aa10.97□□□□□ -0.65
CFDP1-206ENST00000566254 AVENQ9NQS1 362 aaPredicted RBP10.97□□□□□ -0.65
CFDP1-206ENST00000566254 DNAJB12Q9NXW2 375 aaKnown RBP10.97□□□□□ -0.65
CFDP1-206ENST00000566254 ZNF70Q9UC06 446 aaPredicted RBP10.97□□□□□ -0.65
CFDP1-206ENST00000566254 NR2E3Q9Y5X4 410 aa10.97□□□□□ -0.65
CFDP1-206ENST00000566254 CSADQ9Y600 493 aa10.97□□□□□ -0.65
CFDP1-206ENST00000566254 TCP10L2B9ZVM9 353 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 J3QW42 95 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 WDHD1O75717 1129 aaPredicted RBP10.96□□□□□ -0.65
CFDP1-206ENST00000566254 GJB1P08034 283 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 GRK4P32298 578 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 ST13P50502 369 aaKnown RBP10.96□□□□□ -0.65
CFDP1-206ENST00000566254 PRMT2P55345 433 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 RAD51AP2Q09MP3 1159 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 TNFAIP1Q13829 316 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 PCSK7Q16549 785 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 NPAS3Q8IXF0 933 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 GPR161Q8N6U8 529 aaKnown RBP10.96□□□□□ -0.65
CFDP1-206ENST00000566254 RAET1EQ8TD07 263 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 UBE2OQ9C0C9 1292 aaKnown RBP10.96□□□□□ -0.65
CFDP1-206ENST00000566254 RNF208Q9H0X6 261 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 STAP2Q9UGK3 403 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 SRRDQ9UH36 339 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 CPA4Q9UI42 421 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 RIPOR2Q9Y4F9 1068 aa10.96□□□□□ -0.65
CFDP1-206ENST00000566254 LAMA3Q16787 3333 aa10.96□□□□□ -0.66
CFDP1-206ENST00000566254 CUL9Q8IWT3 2517 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 TMEM238LA0A1B0GVL6 79 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 A0A1W2PPC1 479 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 FARP2O94887 1054 aaPredicted RBP10.95□□□□□ -0.66
CFDP1-206ENST00000566254 CETPP11597 493 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 IL1R1P14778 569 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 PSMC4P43686 418 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 FCGRTP55899 365 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 HFE2Q6ZVN8 426 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 G2E3Q7L622 706 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 ZNF804AQ7Z570 1209 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 TNFRSF25Q93038 417 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 HHIPQ96QV1 700 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 KLF15Q9UIH9 416 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 SNCAIPQ9Y6H5 919 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 MYH3P11055 1940 aa10.95□□□□□ -0.66
CFDP1-206ENST00000566254 IL16Q14005 1332 aa10.94□□□□□ -0.66
CFDP1-206ENST00000566254 MYPNQ86TC9 1320 aa10.94□□□□□ -0.66
CFDP1-206ENST00000566254 NEURL1BA8MQ27 555 aa10.94□□□□□ -0.66
CFDP1-206ENST00000566254 H3BM21 787 aa10.94□□□□□ -0.66
CFDP1-206ENST00000566254 FKBP1AP62942 108 aaKnown RBP10.94□□□□□ -0.66
CFDP1-206ENST00000566254 TBC1D8BQ0IIM8 1120 aa10.94□□□□□ -0.66
CFDP1-206ENST00000566254 C17orf99Q6UX52 265 aa10.94□□□□□ -0.66
CFDP1-206ENST00000566254 C15orf52Q6ZUT6 534 aaKnown RBP10.94□□□□□ -0.66
CFDP1-206ENST00000566254 Q7L0L9 218 aa10.94□□□□□ -0.66
CFDP1-206ENST00000566254 U2AF1L4Q8WU68 220 aaKnown RBP10.94□□□□□ -0.66
CFDP1-206ENST00000566254 OXCT2Q9BYC2 517 aaPredicted RBP10.94□□□□□ -0.66
CFDP1-206ENST00000566254 MYH16Q9H6N6 1097 aa10.94□□□□□ -0.66
CFDP1-206ENST00000566254 ZCCHC17Q9NP64 241 aaKnown RBP10.94□□□□□ -0.66
CFDP1-206ENST00000566254 FANCIQ9NVI1 1328 aa10.93□□□□□ -0.66
CFDP1-206ENST00000566254 ARAFP10398 606 aa10.93□□□□□ -0.66
CFDP1-206ENST00000566254 XRCC5P13010 732 aaKnown RBP10.93□□□□□ -0.66
CFDP1-206ENST00000566254 HOXD10P28358 340 aa10.93□□□□□ -0.66
CFDP1-206ENST00000566254 EXOSC9Q06265 439 aaKnown RBP10.93□□□□□ -0.66
CFDP1-206ENST00000566254 SNAPC2Q13487 334 aa10.93□□□□□ -0.66
CFDP1-206ENST00000566254 ERO1BQ86YB8 467 aa10.93□□□□□ -0.66
CFDP1-206ENST00000566254 DZIP1LQ8IYY4 767 aaKnown RBP10.93□□□□□ -0.66
CFDP1-206ENST00000566254 DEFB123Q8N688 67 aa10.93□□□□□ -0.66
CFDP1-206ENST00000566254 TMEM102Q8N9M5 508 aaPredicted RBP10.93□□□□□ -0.66
CFDP1-206ENST00000566254 ZKSCAN4Q969J2 545 aaPredicted RBP10.93□□□□□ -0.66
CFDP1-206ENST00000566254 NXPE3Q969Y0 559 aa10.93□□□□□ -0.66
CFDP1-206ENST00000566254 WRNIP1Q96S55 665 aa10.93□□□□□ -0.66
CFDP1-206ENST00000566254 PBX4Q9BYU1 374 aa10.93□□□□□ -0.66
CFDP1-206ENST00000566254 BHLHE41Q9C0J9 482 aaPredicted RBP10.93□□□□□ -0.66
CFDP1-206ENST00000566254 TTF2Q9UNY4 1162 aaKnown RBP10.93□□□□□ -0.66
CFDP1-206ENST00000566254 GHRHP01286 108 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 CSF1RP07333 972 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 ADH6P28332 368 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 GRIA4P48058 902 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 CACNB3P54284 484 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 UBXN2AP68543 259 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 ATP11AP98196 1134 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 PRKCZQ05513 592 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 MFSD14BQ5SR56 506 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 WDR63Q8IWG1 891 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 DNAAF4Q8WXU2 420 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 MDFIQ99750 246 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 PLA2G12BQ9BX93 195 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 COL25A1Q9BXS0 654 aaPredicted RBP10.92□□□□□ -0.66
CFDP1-206ENST00000566254 RASSF4Q9H2L5 321 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 SLC6A14Q9UN76 642 aa10.92□□□□□ -0.66
CFDP1-206ENST00000566254 ADGRA2Q96PE1 1338 aa10.91□□□□□ -0.66
CFDP1-206ENST00000566254 ANKRD18BA2A2Z9 1011 aa10.91□□□□□ -0.66
CFDP1-206ENST00000566254 ADARB2-AS1A8MUL3 147 aa10.91□□□□□ -0.66
CFDP1-206ENST00000566254 PDHXO00330 501 aa10.91□□□□□ -0.66
CFDP1-206ENST00000566254 PDE2AO00408 941 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms