RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 KCNH3Q9ULD8 1083 aa13.44□□□□□ -0.26
AC087878.1-201ENST00000560709 CCPG1Q9ULG6 757 aa13.44□□□□□ -0.26
AC087878.1-201ENST00000560709 CLEC11AQ9Y240 323 aa13.44□□□□□ -0.26
AC087878.1-201ENST00000560709 A0A1B0GVL5 298 aa13.43□□□□□ -0.26
AC087878.1-201ENST00000560709 ATP2A1O14983 1001 aa13.43□□□□□ -0.26
AC087878.1-201ENST00000560709 ZNF202O95125 648 aa13.43□□□□□ -0.26
AC087878.1-201ENST00000560709 DSG3P32926 999 aa13.43□□□□□ -0.26
AC087878.1-201ENST00000560709 SREBF1P36956 1147 aa13.43□□□□□ -0.26
AC087878.1-201ENST00000560709 NDUFA8P51970 172 aa13.43□□□□□ -0.26
AC087878.1-201ENST00000560709 PABPC4Q13310 644 aaKnown RBP eCLIP13.43□□□□□ -0.26
AC087878.1-201ENST00000560709 TMEM266Q2M3C6 531 aa13.43□□□□□ -0.26
AC087878.1-201ENST00000560709 NOM1Q5C9Z4 860 aaKnown RBP13.43□□□□□ -0.26
AC087878.1-201ENST00000560709 CCDC174Q6PII3 467 aa13.43□□□□□ -0.26
AC087878.1-201ENST00000560709 CATSPERGQ6ZRH7 1159 aa13.43□□□□□ -0.26
AC087878.1-201ENST00000560709 MB21D1Q8N884 522 aa13.43□□□□□ -0.26
AC087878.1-201ENST00000560709 KCNH4Q9UQ05 1017 aa13.43□□□□□ -0.26
AC087878.1-201ENST00000560709 CYP3A7-CYP3A51PA0A087WV96 503 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 A0A0G2JLL6 359 aaPredicted RBP13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 VWA5AO00534 786 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 SLC26A4O43511 780 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 CYP3A7P24462 503 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 PRKG1Q13976 671 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 UBE2SQ16763 222 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 UVSSAQ2YD98 709 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 TPRNQ4KMQ1 711 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 LDLRAD1Q5T700 205 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 SASS6Q6UVJ0 657 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 FASTKD5Q7L8L6 764 aaKnown RBP13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 PRRT2Q7Z6L0 340 aaPredicted RBP13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 C4orf32Q8N8J7 132 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 GTF3C2Q8WUA4 911 aaPredicted RBP13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 SDF4Q9BRK5 362 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 CSRNP2Q9H175 543 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 FBXO28Q9NVF7 368 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 TMEM260Q9NX78 707 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 ADAMTS5Q9UNA0 930 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 STK24Q9Y6E0 443 aa13.42□□□□□ -0.26
AC087878.1-201ENST00000560709 PHIPQ8WWQ0 1821 aa13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 VWA3AA6NCI4 1184 aa13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 ADAMTS3O15072 1205 aa13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 TBX3O15119 743 aa13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 CYP3A4P08684 503 aa13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 HOXA7P31268 230 aaPredicted RBP13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 CIITAP33076 1130 aa13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 COPB2P35606 906 aa13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 ZRSR1Q15695 479 aaKnown RBP13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 CALCRLQ16602 461 aa13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 USP17L6PQ6QN14 398 aa13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 SLFN12Q8IYM2 578 aa13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 MBOAT7Q96N66 472 aa13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 CLIC6Q96NY7 704 aa13.41□□□□□ -0.26
AC087878.1-201ENST00000560709 ZNF536O15090 1300 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 POLR2AP24928 1970 aaKnown RBP13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 WNT7AO00755 349 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 OPLAHO14841 1288 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 HSD17B4P51659 736 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 SNAP25P60880 206 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 ARHGAP4P98171 946 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 GAS2L3Q86XJ1 694 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 IQUBQ8NA54 791 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 CNNM3Q8NE01 707 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 CRYGNQ8WXF5 182 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 TEX13BQ9BXU2 312 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 CCSER1Q9C0I3 900 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 CUEDC2Q9H467 287 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 ELP3Q9H9T3 547 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 MAGEF1Q9HAY2 307 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 CCDC39Q9UFE4 941 aa13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 DDX25Q9UHL0 483 aaKnown RBP13.4□□□□□ -0.26
AC087878.1-201ENST00000560709 OTOFQ9HC10 1997 aa13.4□□□□□ -0.27
AC087878.1-201ENST00000560709 CFBP00751 764 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 XRCC6P12956 609 aaKnown RBP eCLIP13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 SETQ01105 290 aaPredicted RBP13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 SNAPC2Q13487 334 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 PDIA5Q14554 519 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 Q4G0T1 1027 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 LBX2Q6XYB7 198 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 KRBA2Q6ZNG9 492 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 CEP57L1Q8IYX8 460 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 SYMPKQ92797 1274 aaKnown RBP13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 ATG4CQ96DT6 458 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 OTUD5Q96G74 571 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 MTMR9Q96QG7 549 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 FUCA2Q9BTY2 467 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 RRAGCQ9HB90 399 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 FZD1Q9UP38 647 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 AGTPBP1Q9UPW5 1226 aa13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 GOLGB1Q14789 3259 aaKnown RBP13.39□□□□□ -0.27
AC087878.1-201ENST00000560709 LOC285556D6RIA3 1793 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 SPDYE16A6NNV3 312 aaPredicted RBP13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 IRF6O14896 467 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 MARCH6O60337 910 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 MYL1P05976 194 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 OSBPP22059 807 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 IRX3P78415 501 aaPredicted RBP13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 CAMK4Q16566 473 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 MAP1SQ66K74 1059 aaPredicted RBP13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 XRRA1Q6P2D8 792 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 305.3 ms