RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 PPP2R5DQ14738 602 aa5.95□□□□□ -1.46
LRRC28-218ENST00000560236 UBXN11Q5T124 520 aa5.95□□□□□ -1.46
LRRC28-218ENST00000560236 ZFYVE27Q5T4F4 411 aa5.95□□□□□ -1.46
LRRC28-218ENST00000560236 NT5DC1Q5TFE4 455 aa5.95□□□□□ -1.46
LRRC28-218ENST00000560236 SAPCD2Q86UD0 394 aa5.95□□□□□ -1.46
LRRC28-218ENST00000560236 CABP7Q86V35 215 aa5.95□□□□□ -1.46
LRRC28-218ENST00000560236 ALG3Q92685 438 aa5.95□□□□□ -1.46
LRRC28-218ENST00000560236 SPATA25Q9BR10 227 aa5.95□□□□□ -1.46
LRRC28-218ENST00000560236 CBFA2T2O43439 604 aa5.94□□□□□ -1.46
LRRC28-218ENST00000560236 GLI4P10075 376 aa5.94□□□□□ -1.46
LRRC28-218ENST00000560236 HTRA3P83110 453 aa5.94□□□□□ -1.46
LRRC28-218ENST00000560236 ZNF394Q53GI3 561 aa5.94□□□□□ -1.46
LRRC28-218ENST00000560236 EEF1DP3Q658K8 133 aa5.94□□□□□ -1.46
LRRC28-218ENST00000560236 RCSD1Q6JBY9 416 aa5.94□□□□□ -1.46
LRRC28-218ENST00000560236 ZNF526Q8TF50 670 aaPredicted RBP5.94□□□□□ -1.46
LRRC28-218ENST00000560236 PCDHGB7Q9Y5F8 929 aa5.94□□□□□ -1.46
LRRC28-218ENST00000560236 ADAMTS20P59510 1910 aa5.93□□□□□ -1.46
LRRC28-218ENST00000560236 BAZ1AQ9NRL2 1556 aaPredicted RBP5.93□□□□□ -1.46
LRRC28-218ENST00000560236 SH3D21A4FU49 640 aa5.93□□□□□ -1.46
LRRC28-218ENST00000560236 FANCCQ00597 558 aa5.93□□□□□ -1.46
LRRC28-218ENST00000560236 B3GNT8Q7Z7M8 397 aa5.93□□□□□ -1.46
LRRC28-218ENST00000560236 LZTR1Q8N653 840 aa5.93□□□□□ -1.46
LRRC28-218ENST00000560236 ADCY4Q8NFM4 1077 aa5.93□□□□□ -1.46
LRRC28-218ENST00000560236 HAUS7Q99871 368 aa5.93□□□□□ -1.46
LRRC28-218ENST00000560236 BACH2Q9BYV9 841 aa5.93□□□□□ -1.46
LRRC28-218ENST00000560236 RXFP1Q9HBX9 757 aa5.93□□□□□ -1.46
LRRC28-218ENST00000560236 WHRNQ9P202 907 aa5.93□□□□□ -1.46
LRRC28-218ENST00000560236 NCAPD3P42695 1498 aa5.93□□□□□ -1.46
LRRC28-218ENST00000560236 AURKAO14965 403 aa5.92□□□□□ -1.46
LRRC28-218ENST00000560236 ZNF16P17020 682 aaPredicted RBP5.92□□□□□ -1.46
LRRC28-218ENST00000560236 PMLP29590 882 aa5.92□□□□□ -1.46
LRRC28-218ENST00000560236 FERMT3Q86UX7 667 aa5.92□□□□□ -1.46
LRRC28-218ENST00000560236 CRBNQ96SW2 442 aa5.92□□□□□ -1.46
LRRC28-218ENST00000560236 GBP3Q9H0R5 595 aa5.92□□□□□ -1.46
LRRC28-218ENST00000560236 BCAS3Q9H6U6 928 aa5.92□□□□□ -1.46
LRRC28-218ENST00000560236 METTL5Q9NRN9 209 aaKnown RBP5.92□□□□□ -1.46
LRRC28-218ENST00000560236 NUDT5Q9UKK9 219 aa5.92□□□□□ -1.46
LRRC28-218ENST00000560236 RWDD3Q9Y3V2 267 aa5.92□□□□□ -1.46
LRRC28-218ENST00000560236 LTBP3Q9NS15 1303 aa5.92□□□□□ -1.46
LRRC28-218ENST00000560236 LAMC3Q9Y6N6 1575 aa5.92□□□□□ -1.46
LRRC28-218ENST00000560236 KIF21AQ7Z4S6 1674 aa5.91□□□□□ -1.46
LRRC28-218ENST00000560236 K7ESM1 405 aa5.91□□□□□ -1.46
LRRC28-218ENST00000560236 STXBP3O00186 592 aa5.91□□□□□ -1.46
LRRC28-218ENST00000560236 SEPHS1P49903 392 aa5.91□□□□□ -1.46
LRRC28-218ENST00000560236 DLX2Q07687 328 aaPredicted RBP5.91□□□□□ -1.46
LRRC28-218ENST00000560236 SLC9A5Q14940 896 aa5.91□□□□□ -1.46
LRRC28-218ENST00000560236 ZXDCQ2QGD7 858 aaPredicted RBP5.91□□□□□ -1.46
LRRC28-218ENST00000560236 GNPTABQ3T906 1256 aa5.91□□□□□ -1.46
LRRC28-218ENST00000560236 HEATR6Q6AI08 1181 aaKnown RBP5.91□□□□□ -1.46
LRRC28-218ENST00000560236 CCDC81Q6ZN84 652 aa5.91□□□□□ -1.46
LRRC28-218ENST00000560236 ADAT2Q7Z6V5 191 aaKnown RBP5.91□□□□□ -1.46
LRRC28-218ENST00000560236 CARFQ8N187 725 aa5.91□□□□□ -1.46
LRRC28-218ENST00000560236 TSPAN17Q96FV3 270 aa5.91□□□□□ -1.46
LRRC28-218ENST00000560236 PEX11GQ96HA9 241 aa5.91□□□□□ -1.46
LRRC28-218ENST00000560236 MCMBPQ9BTE3 642 aa5.91□□□□□ -1.46
LRRC28-218ENST00000560236 CNOT11Q9UKZ1 510 aaKnown RBP5.91□□□□□ -1.46
LRRC28-218ENST00000560236 SLC12A7Q9Y666 1083 aa5.91□□□□□ -1.46
LRRC28-218ENST00000560236 ZCCHC6Q5VYS8 1495 aaKnown RBP5.9□□□□□ -1.46
LRRC28-218ENST00000560236 GJA9P57773 515 aa5.9□□□□□ -1.46
LRRC28-218ENST00000560236 TRIM26Q12899 539 aaPredicted RBP5.9□□□□□ -1.46
LRRC28-218ENST00000560236 DPY19L1Q2PZI1 675 aa5.9□□□□□ -1.46
LRRC28-218ENST00000560236 HHIPL2Q6UWX4 724 aa5.9□□□□□ -1.46
LRRC28-218ENST00000560236 NETO2Q8NC67 525 aa5.9□□□□□ -1.46
LRRC28-218ENST00000560236 SMARCC2Q8TAQ2 1214 aa5.9□□□□□ -1.46
LRRC28-218ENST00000560236 DDX1Q92499 740 aaKnown RBP5.9□□□□□ -1.46
LRRC28-218ENST00000560236 KLHL25Q9H0H3 589 aa5.9□□□□□ -1.46
LRRC28-218ENST00000560236 PHAXQ9H814 394 aaKnown RBP5.9□□□□□ -1.46
LRRC28-218ENST00000560236 FBLN5Q9UBX5 448 aa5.9□□□□□ -1.46
LRRC28-218ENST00000560236 RIMBP3CA6NJZ7 1639 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 RIMBP3BA6NNM3 1639 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 RIMBP3Q9UFD9 1639 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 C2orf71A6NGG8 1288 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 NOBOXO60393 691 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 VAMP4O75379 141 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 PPM1BO75688 479 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 SLC7A5Q01650 507 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 COL9A2Q14055 689 aaPredicted RBP5.89□□□□□ -1.47
LRRC28-218ENST00000560236 ZNF827Q17R98 1081 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 USP33Q8TEY7 942 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 CPA5Q8WXQ8 436 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 GPR20Q99678 358 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 GINM1Q9NU53 330 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 GULP1Q9UBP9 304 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 DDX41Q9UJV9 622 aaKnown RBP5.89□□□□□ -1.47
LRRC28-218ENST00000560236 PALD1Q9ULE6 856 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 PCDHB10Q9UN67 800 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 BACE2Q9Y5Z0 518 aa5.89□□□□□ -1.47
LRRC28-218ENST00000560236 NESP48681 1621 aa5.88□□□□□ -1.47
LRRC28-218ENST00000560236 ZBTB7AO95365 584 aa5.88□□□□□ -1.47
LRRC28-218ENST00000560236 EPHX1P07099 455 aa5.88□□□□□ -1.47
LRRC28-218ENST00000560236 INSRRP14616 1297 aa5.88□□□□□ -1.47
LRRC28-218ENST00000560236 CNR2P34972 360 aa5.88□□□□□ -1.47
LRRC28-218ENST00000560236 SARSP49591 514 aaKnown RBP5.88□□□□□ -1.47
LRRC28-218ENST00000560236 EIF6P56537 245 aaKnown RBP5.88□□□□□ -1.47
LRRC28-218ENST00000560236 RACK1P63244 317 aaKnown RBP5.88□□□□□ -1.47
LRRC28-218ENST00000560236 AMPD2Q01433 879 aa5.88□□□□□ -1.47
LRRC28-218ENST00000560236 CPNE8Q86YQ8 564 aa5.88□□□□□ -1.47
LRRC28-218ENST00000560236 FGD4Q96M96 766 aa5.88□□□□□ -1.47
LRRC28-218ENST00000560236 NOX5Q96PH1 765 aa5.88□□□□□ -1.47
LRRC28-218ENST00000560236 MTA3Q9BTC8 594 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms