RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.28□□□□□ -0.28
TMEM116-218ENST00000552839 IL23AQ9NPF7 189 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 MSRAQ9UJ68 235 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 NAP1L2Q9ULW6 460 aaPredicted RBP13.28□□□□□ -0.28
TMEM116-218ENST00000552839 YBX2Q9Y2T7 364 aaKnown RBP13.28□□□□□ -0.28
TMEM116-218ENST00000552839 CYP46A1Q9Y6A2 500 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 PLIN4Q96Q06 1357 aa13.28□□□□□ -0.28
TMEM116-218ENST00000552839 CTAGE5O15320 804 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 TLR3O15455 904 aaKnown RBP13.27□□□□□ -0.29
TMEM116-218ENST00000552839 TTLL1O95922 423 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 PLA2G5P39877 138 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 SLC4A3P48751 1232 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 WTAPQ15007 396 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 TMEM67Q5HYA8 995 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 IFIT1BQ5T764 474 aaKnown RBP13.27□□□□□ -0.29
TMEM116-218ENST00000552839 STOX1Q6ZVD7 989 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 RASEFQ8IZ41 740 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 CPXCR1Q8N123 301 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 ZKSCAN3Q9BRR0 538 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 ABHD16BQ9H3Z7 469 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 KAT14Q9H8E8 782 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 SPC25Q9HBM1 224 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 MTMR7Q9Y216 660 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 TNKSO95271 1327 aa13.27□□□□□ -0.29
TMEM116-218ENST00000552839 CCDC69A6NI79 296 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 F5H6K3 240 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 ATP2A1O14983 1001 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 FGBP02675 491 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 KLRC3Q07444 240 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 UMODL1Q5DID0 1318 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 SYNE3Q6ZMZ3 975 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.26□□□□□ -0.29
TMEM116-218ENST00000552839 ARMCX2Q7L311 632 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 CHST3Q7LGC8 479 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 PRPF38AQ8NAV1 312 aaKnown RBP13.26□□□□□ -0.29
TMEM116-218ENST00000552839 CEP95Q96GE4 821 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 ZSCAN10Q96SZ4 725 aaPredicted RBP13.26□□□□□ -0.29
TMEM116-218ENST00000552839 KATNBL1Q9H079 304 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 SLC28A3Q9HAS3 691 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 RAVER2Q9HCJ3 691 aaKnown RBP13.26□□□□□ -0.29
TMEM116-218ENST00000552839 CLIP2Q9UDT6 1046 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 TAF6LQ9Y6J9 622 aa13.26□□□□□ -0.29
TMEM116-218ENST00000552839 ASTN1O14525 1302 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.25□□□□□ -0.29
TMEM116-218ENST00000552839 NDUFB10O96000 172 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 FGRP09769 529 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 RABGGTBP53611 331 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 NKX3-2P78367 333 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 BEX3Q00994 111 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 TSGA10IPQ3SY00 556 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 DHX32Q7L7V1 743 aaKnown RBP13.25□□□□□ -0.29
TMEM116-218ENST00000552839 OTOP2Q7RTS6 562 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 CCDC144CPQ8IYA2 1237 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 MB21D2Q8IYB1 491 aaPredicted RBP13.25□□□□□ -0.29
TMEM116-218ENST00000552839 LRRC47Q8N1G4 583 aaKnown RBP13.25□□□□□ -0.29
TMEM116-218ENST00000552839 SLC43A3Q8NBI5 491 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 IL27Q8NEV9 243 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 TMEM87BQ96K49 555 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 NECAB3Q96P71 396 aaPredicted RBP13.25□□□□□ -0.29
TMEM116-218ENST00000552839 UPF3BQ9BZI7 483 aaKnown RBP13.25□□□□□ -0.29
TMEM116-218ENST00000552839 HIPK3Q9H422 1215 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 ZSWIM5Q9P217 1185 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 NYAP2Q9P242 653 aa13.25□□□□□ -0.29
TMEM116-218ENST00000552839 NCOR1O75376 2440 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 NMT2O60551 498 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 ZBED4O75132 1171 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 TOP1P11387 765 aaKnown RBP13.24□□□□□ -0.29
TMEM116-218ENST00000552839 BMP1P13497 986 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 RPS6KB1P23443 525 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 IKQ13123 557 aaPredicted RBP13.24□□□□□ -0.29
TMEM116-218ENST00000552839 CCDC96Q2M329 555 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 ADCK5Q3MIX3 580 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 CXCL17Q6UXB2 119 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 CYB5R4Q7L1T6 521 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 CATIPQ7Z7H3 387 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 ANKRD35Q8N283 1001 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 KCNB2Q92953 911 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 FAM122AQ96E09 287 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 LRRC2Q9BYS8 371 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 MTIF3Q9H2K0 278 aaKnown RBP13.24□□□□□ -0.29
TMEM116-218ENST00000552839 PDRG1Q9NUG6 133 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 TCP11L1Q9NUJ3 509 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 MTMR4Q9NYA4 1195 aa13.24□□□□□ -0.29
TMEM116-218ENST00000552839 GRIN2DO15399 1336 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 WDR19Q8NEZ3 1342 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 LRRC37A2A6NM11 1700 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 ST18O60284 1047 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 MYOGP15173 224 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 CCL23P55773 120 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 CNTN2Q02246 1040 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 TNFAIP2Q03169 654 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 TFF2Q03403 129 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 RABEP1Q15276 862 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 RUFY3Q7L099 469 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 DGKHQ86XP1 1220 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 TMTC2Q8N394 836 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 CHST13Q8NET6 341 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 TCEANC2Q96MN5 208 aa13.23□□□□□ -0.29
TMEM116-218ENST00000552839 TTC14Q96N46 770 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms