RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 PPP2R5BQ15173 497 aa20.09■□□□□ 0.81
CDK4-208ENST00000551706 USH1GQ495M9 461 aa20.09■□□□□ 0.81
CDK4-208ENST00000551706 ZNF697Q5TEC3 545 aa20.09■□□□□ 0.81
CDK4-208ENST00000551706 MRPL11Q9Y3B7 192 aaKnown RBP20.09■□□□□ 0.81
CDK4-208ENST00000551706 PNMA6FA0A0J9YX94 578 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 CYTH3O43739 400 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 RXRAP19793 462 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 CACNB2Q08289 660 aaPredicted RBP20.08■□□□□ 0.81
CDK4-208ENST00000551706 NSMFQ6X4W1 530 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 HOMER1Q86YM7 354 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 CCDC144CPQ8IYA2 1237 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 FAM133AQ8N9E0 248 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 RGS22Q8NE09 1264 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 CLEC4DQ8WXI8 215 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 BRF1Q92994 677 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 TINF2Q9BSI4 451 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 CYP39A1Q9NYL5 469 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 NRBP1Q9UHY1 535 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 BRPF3Q9ULD4 1205 aa20.08■□□□□ 0.81
CDK4-208ENST00000551706 NFIBO00712 420 aa20.07■□□□□ 0.8
CDK4-208ENST00000551706 SEC24BO95487 1268 aa20.07■□□□□ 0.8
CDK4-208ENST00000551706 TAL1P17542 331 aaPredicted RBP20.07■□□□□ 0.8
CDK4-208ENST00000551706 CYP2C19P33261 490 aa20.07■□□□□ 0.8
CDK4-208ENST00000551706 RTN1Q16799 776 aa20.07■□□□□ 0.8
CDK4-208ENST00000551706 MAMDC4Q6UXC1 1216 aa20.07■□□□□ 0.8
CDK4-208ENST00000551706 TMTC3Q6ZXV5 915 aa20.07■□□□□ 0.8
CDK4-208ENST00000551706 MCF2L2Q86YR7 1114 aa20.07■□□□□ 0.8
CDK4-208ENST00000551706 RRP36Q96EU6 259 aaKnown RBP20.07■□□□□ 0.8
CDK4-208ENST00000551706 IL17RAQ96F46 866 aa20.07■□□□□ 0.8
CDK4-208ENST00000551706 PIGSQ96S52 555 aa20.07■□□□□ 0.8
CDK4-208ENST00000551706 SEC63Q9UGP8 760 aaKnown RBP20.07■□□□□ 0.8
CDK4-208ENST00000551706 NAP1L2Q9ULW6 460 aaPredicted RBP20.07■□□□□ 0.8
CDK4-208ENST00000551706 PRUNE2Q8WUY3 3088 aa20.07■□□□□ 0.8
CDK4-208ENST00000551706 SYNGAP1Q96PV0 1343 aa20.06■□□□□ 0.8
CDK4-208ENST00000551706 CCDC196A0A1B0GTZ2 297 aa20.06■□□□□ 0.8
CDK4-208ENST00000551706 GOLGA8AA7E2F4 631 aa20.06■□□□□ 0.8
CDK4-208ENST00000551706 GOLGA8BA8MQT2 603 aa20.06■□□□□ 0.8
CDK4-208ENST00000551706 PLEKHA8P1O95397 391 aa20.06■□□□□ 0.8
CDK4-208ENST00000551706 COL6A1P12109 1028 aa20.06■□□□□ 0.8
CDK4-208ENST00000551706 APOBRQ0VD83 1088 aa20.06■□□□□ 0.8
CDK4-208ENST00000551706 BAATQ14032 418 aaPredicted RBP20.06■□□□□ 0.8
CDK4-208ENST00000551706 SLC35G1Q2M3R5 365 aa20.06■□□□□ 0.8
CDK4-208ENST00000551706 RNF207Q6ZRF8 634 aa20.06■□□□□ 0.8
CDK4-208ENST00000551706 RAB11FIP4Q86YS3 637 aa20.06■□□□□ 0.8
CDK4-208ENST00000551706 SRBD1Q8N5C6 995 aaKnown RBP20.06■□□□□ 0.8
CDK4-208ENST00000551706 MAFAQ8NHW3 353 aaPredicted RBP20.06■□□□□ 0.8
CDK4-208ENST00000551706 UPF3BQ9BZI7 483 aaKnown RBP20.06■□□□□ 0.8
CDK4-208ENST00000551706 PCDHA1Q9Y5I3 950 aa20.06■□□□□ 0.8
CDK4-208ENST00000551706 PTPDC1A2A3K4 754 aa20.05■□□□□ 0.8
CDK4-208ENST00000551706 METAP2P50579 478 aaKnown RBP eCLIP20.05■□□□□ 0.83e-6■■■■□ 25.7
CDK4-208ENST00000551706 EVCP57679 992 aa20.05■□□□□ 0.8
CDK4-208ENST00000551706 LRRC26Q2I0M4 334 aa20.05■□□□□ 0.8
CDK4-208ENST00000551706 CDX2Q99626 313 aaPredicted RBP20.05■□□□□ 0.8
CDK4-208ENST00000551706 ADD3Q9UEY8 706 aaKnown RBP20.05■□□□□ 0.8
CDK4-208ENST00000551706 TTC28Q96AY4 2481 aa20.05■□□□□ 0.8
CDK4-208ENST00000551706 LOC102724159A0A0B4J2E5 919 aa20.04■□□□□ 0.8
CDK4-208ENST00000551706 ASB14A6NK59 587 aa20.04■□□□□ 0.8
CDK4-208ENST00000551706 MSCO60682 206 aa20.04■□□□□ 0.8
CDK4-208ENST00000551706 CYBAP13498 195 aa20.04■□□□□ 0.8
CDK4-208ENST00000551706 COL9A1P20849 921 aa20.04■□□□□ 0.8
CDK4-208ENST00000551706 CNTN2Q02246 1040 aa20.04■□□□□ 0.8
CDK4-208ENST00000551706 PWP2Q15269 919 aaKnown RBP20.04■□□□□ 0.8
CDK4-208ENST00000551706 SAMD3Q8N6K7 520 aa20.04■□□□□ 0.8
CDK4-208ENST00000551706 SYMPKQ92797 1274 aaKnown RBP20.04■□□□□ 0.8
CDK4-208ENST00000551706 LBHD1Q9BQE6 289 aaPredicted RBP20.04■□□□□ 0.8
CDK4-208ENST00000551706 PDRG1Q9NUG6 133 aa20.04■□□□□ 0.8
CDK4-208ENST00000551706 CNPY2Q9Y2B0 182 aa20.04■□□□□ 0.8
CDK4-208ENST00000551706 PPP1R11O60927 126 aaPredicted RBP20.03■□□□□ 0.8
CDK4-208ENST00000551706 CCND3P30281 292 aaPredicted RBP20.03■□□□□ 0.8
CDK4-208ENST00000551706 RPS6P62753 249 aaKnown RBP20.03■□□□□ 0.8
CDK4-208ENST00000551706 FGD4Q96M96 766 aa20.03■□□□□ 0.8
CDK4-208ENST00000551706 MPHOSPH6Q99547 160 aaKnown RBP20.03■□□□□ 0.8
CDK4-208ENST00000551706 MAP3K20Q9NYL2 800 aaKnown RBP20.03■□□□□ 0.8
CDK4-208ENST00000551706 NID2Q14112 1375 aa20.03■□□□□ 0.8
CDK4-208ENST00000551706 ZNFX1Q9P2E3 1918 aaKnown RBP20.02■□□□□ 0.8
CDK4-208ENST00000551706 SOWAHBA6NEL2 793 aa20.02■□□□□ 0.8
CDK4-208ENST00000551706 CALML3P27482 149 aa20.02■□□□□ 0.8
CDK4-208ENST00000551706 CNGA1P29973 690 aa20.02■□□□□ 0.8
CDK4-208ENST00000551706 TOB2Q14106 344 aaPredicted RBP20.02■□□□□ 0.8
CDK4-208ENST00000551706 SLC30A10Q6XR72 485 aa20.02■□□□□ 0.8
CDK4-208ENST00000551706 CMTR1Q8N1G2 835 aaKnown RBP20.02■□□□□ 0.8
CDK4-208ENST00000551706 DNERQ8NFT8 737 aa20.02■□□□□ 0.8
CDK4-208ENST00000551706 PIBF1Q8WXW3 757 aa20.02■□□□□ 0.8
CDK4-208ENST00000551706 ALDH8A1Q9H2A2 487 aaPredicted RBP20.02■□□□□ 0.8
CDK4-208ENST00000551706 UPF2Q9HAU5 1272 aaKnown RBP20.02■□□□□ 0.8
CDK4-208ENST00000551706 DNAH12Q6ZR08 3092 aa20.01■□□□□ 0.79
CDK4-208ENST00000551706 B4DLN1 442 aa20.01■□□□□ 0.79
CDK4-208ENST00000551706 SEPT4O43236 478 aa20.01■□□□□ 0.79
CDK4-208ENST00000551706 MRPL12P52815 198 aaKnown RBP20.01■□□□□ 0.79
CDK4-208ENST00000551706 GHRHRQ02643 423 aa20.01■□□□□ 0.79
CDK4-208ENST00000551706 ANKRD1Q15327 319 aa20.01■□□□□ 0.79
CDK4-208ENST00000551706 ARMCX2Q7L311 632 aa20.01■□□□□ 0.79
CDK4-208ENST00000551706 CCDC82Q8N4S0 544 aa20.01■□□□□ 0.79
CDK4-208ENST00000551706 TRPV1Q8NER1 839 aa20.01■□□□□ 0.79
CDK4-208ENST00000551706 ZNF274Q96GC6 653 aaPredicted RBP20.01■□□□□ 0.79
CDK4-208ENST00000551706 ABHD16BQ9H3Z7 469 aa20.01■□□□□ 0.79
CDK4-208ENST00000551706 FAM217BQ9NTX9 383 aaPredicted RBP20.01■□□□□ 0.79
CDK4-208ENST00000551706 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.01■□□□□ 0.79
CDK4-208ENST00000551706 DDX20Q9UHI6 824 aaKnown RBP20.01■□□□□ 0.79
CDK4-208ENST00000551706 SNAI1O95863 264 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms