RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 PDHBP11177 359 aa13.63□□□□□ -0.23
PRPF40B-212ENST00000551111 TOP1P11387 765 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-212ENST00000551111 SLC30A10Q6XR72 485 aa13.63□□□□□ -0.23
PRPF40B-212ENST00000551111 KIAA1211Q6ZU35 1233 aa13.63□□□□□ -0.23
PRPF40B-212ENST00000551111 MORC4Q8TE76 937 aa13.63□□□□□ -0.23
PRPF40B-212ENST00000551111 RILPL2Q969X0 211 aa13.63□□□□□ -0.23
PRPF40B-212ENST00000551111 MROH7Q68CQ1 1323 aa13.63□□□□□ -0.23
PRPF40B-212ENST00000551111 PTPRSQ13332 1948 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 B4GALT4O60513 344 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 GOLGA8HP0CJ92 632 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 FOSL2P15408 326 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 ALDH5A1P51649 535 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 ITGA7Q13683 1181 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 AKNAD1Q5T1N1 836 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 IQSEC1Q6DN90 963 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 PLEKHM2Q8IWE5 1019 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 TBC1D5Q92609 795 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 PBX4Q9BYU1 374 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 AP5M1Q9H0R1 490 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 ZNF576Q9H609 170 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 TCP11L1Q9NUJ3 509 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 ZBTB47Q9UFB7 747 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 CCDC171Q6TFL3 1326 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 TTC28Q96AY4 2481 aa13.62□□□□□ -0.23
PRPF40B-212ENST00000551111 PTPDC1A2A3K4 754 aa13.61□□□□□ -0.23
PRPF40B-212ENST00000551111 SDSP20132 328 aa13.61□□□□□ -0.23
PRPF40B-212ENST00000551111 CCL23P55773 120 aa13.61□□□□□ -0.23
PRPF40B-212ENST00000551111 ZNF543Q08ER8 600 aa13.61□□□□□ -0.23
PRPF40B-212ENST00000551111 PPIGQ13427 754 aaKnown RBP eCLIP13.61□□□□□ -0.23
PRPF40B-212ENST00000551111 PPP4R3BQ5MIZ7 849 aa13.61□□□□□ -0.23
PRPF40B-212ENST00000551111 SMC5Q8IY18 1101 aa13.61□□□□□ -0.23
PRPF40B-212ENST00000551111 COPS5Q92905 334 aa13.61□□□□□ -0.23
PRPF40B-212ENST00000551111 NOC4LQ9BVI4 516 aaKnown RBP13.61□□□□□ -0.23
PRPF40B-212ENST00000551111 UBA5Q9GZZ9 404 aa13.61□□□□□ -0.23
PRPF40B-212ENST00000551111 WNT8AQ9H1J5 351 aa13.61□□□□□ -0.23
PRPF40B-212ENST00000551111 PRDM6Q9NQX0 595 aa13.61□□□□□ -0.23
PRPF40B-212ENST00000551111 TCF20Q9UGU0 1960 aaKnown RBP13.61□□□□□ -0.23
PRPF40B-212ENST00000551111 SNHG28P0DPA3 235 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 CALML3P27482 149 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 DUSP28Q4G0W2 176 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 MFSD6Q6ZSS7 791 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 TMEM199Q8N511 208 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 EXOC6Q8TAG9 804 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 TIFAQ96CG3 184 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 SCLYQ96I15 445 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 YTHDC1Q96MU7 727 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 WDR11Q9BZH6 1224 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 IL25Q9H293 177 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 HIPK3Q9H422 1215 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 VTA1Q9NP79 307 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 IL23AQ9NPF7 189 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 ZMYM6O95789 1325 aa13.6□□□□□ -0.23
PRPF40B-212ENST00000551111 RBM47A0AV96 593 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-212ENST00000551111 TLR3O15455 904 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-212ENST00000551111 CYP2C9P11712 490 aa13.59□□□□□ -0.23
PRPF40B-212ENST00000551111 RPS6P62753 249 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-212ENST00000551111 CWC27Q6UX04 472 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-212ENST00000551111 OTOP2Q7RTS6 562 aa13.59□□□□□ -0.23
PRPF40B-212ENST00000551111 PRDM12Q9H4Q4 367 aa13.59□□□□□ -0.23
PRPF40B-212ENST00000551111 TRMT13Q9NUP7 481 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-212ENST00000551111 YBX2Q9Y2T7 364 aaKnown RBP13.59□□□□□ -0.23
PRPF40B-212ENST00000551111 Q9Y3F1 56 aa13.59□□□□□ -0.23
PRPF40B-212ENST00000551111 MUC3AQ02505 3323 aa13.59□□□□□ -0.23
PRPF40B-212ENST00000551111 TANC1Q9C0D5 1861 aa13.59□□□□□ -0.23
PRPF40B-212ENST00000551111 DOCK5Q9H7D0 1870 aa13.59□□□□□ -0.23
PRPF40B-212ENST00000551111 TMEM265A0A087WTH1 108 aa13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 B4E1Z4 1266 aa13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 ARIH2O95376 493 aa13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 MYOGP15173 224 aa13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 RABGGTBP53611 331 aa13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 PURAQ00577 322 aaKnown RBP13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 ADGRE1Q14246 886 aa13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 USH1GQ495M9 461 aa13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 RNF207Q6ZRF8 634 aa13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 CHD1LQ86WJ1 897 aa13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 HERVK_113Q902F9 699 aa13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 TTC14Q96N46 770 aa13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 ALDH8A1Q9H2A2 487 aaPredicted RBP13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 COL20A1Q9P218 1284 aa13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 PRRC2BQ5JSZ5 2229 aaKnown RBP13.58□□□□□ -0.24
PRPF40B-212ENST00000551111 TRANK1O15050 2925 aa13.57□□□□□ -0.24
PRPF40B-212ENST00000551111 KDM4AO75164 1064 aa13.57□□□□□ -0.24
PRPF40B-212ENST00000551111 CABYRO75952 493 aa13.57□□□□□ -0.24
PRPF40B-212ENST00000551111 MYL3P08590 195 aa13.57□□□□□ -0.24
PRPF40B-212ENST00000551111 EDNRBP24530 442 aa13.57□□□□□ -0.24
PRPF40B-212ENST00000551111 NUCB1Q02818 461 aa13.57□□□□□ -0.24
PRPF40B-212ENST00000551111 OR6J1Q8NGC5 347 aa13.57□□□□□ -0.24
PRPF40B-212ENST00000551111 PPM1EQ8WY54 764 aa13.57□□□□□ -0.24
PRPF40B-212ENST00000551111 NKX2-4Q9H2Z4 354 aa13.57□□□□□ -0.24
PRPF40B-212ENST00000551111 OSBPL3Q9H4L5 887 aa13.57□□□□□ -0.24
PRPF40B-212ENST00000551111 ADD3Q9UEY8 706 aaKnown RBP13.57□□□□□ -0.24
PRPF40B-212ENST00000551111 ZEB2O60315 1214 aa13.56□□□□□ -0.24
PRPF40B-212ENST00000551111 FGBP02675 491 aa13.56□□□□□ -0.24
PRPF40B-212ENST00000551111 TTLL4Q14679 1199 aa13.56□□□□□ -0.24
PRPF40B-212ENST00000551111 NBPF20Q3BBV1 942 aa13.56□□□□□ -0.24
PRPF40B-212ENST00000551111 PSRC1Q6PGN9 363 aaPredicted RBP13.56□□□□□ -0.24
PRPF40B-212ENST00000551111 TAAR1Q96RJ0 339 aa13.56□□□□□ -0.24
PRPF40B-212ENST00000551111 ZSWIM5Q9P217 1185 aa13.56□□□□□ -0.24
PRPF40B-212ENST00000551111 NCOR1O75376 2440 aa13.55□□□□□ -0.24
PRPF40B-212ENST00000551111 ZNF213O14771 459 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms