RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 MTIF3Q9H2K0 278 aaKnown RBP3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 KCNQ5Q9NR82 932 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 CACNA2D2Q9NY47 1150 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 FAM13BQ9NYF5 915 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 STOML1Q9UBI4 398 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 ZNF652Q9Y2D9 606 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 RAXQ9Y2V3 346 aa3.06□□□□□ -1.92
TRAV1-1-201ENST00000542354 IGF2RP11717 2491 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 OTOGLQ3ZCN5 2332 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 LTBP2Q14767 1821 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 LAMB1P07942 1786 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 A0A1W2PP64 1363 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 RTL1A6NKG5 1358 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 ST20-MTHFSA0A0A6YYL1 179 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 WNT10BO00744 389 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 ECE2O60344 883 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 EIF4EBP3O60516 100 aaPredicted RBP3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 IGLV1-40P01703 118 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 RARAP10276 462 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 CPB1P15086 417 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 EIF2AK2P19525 551 aaKnown RBP3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 NOS3P29474 1203 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 IL6STP40189 918 aaPredicted RBP3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 CD97P48960 835 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 MTHFSP49914 203 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 SEC13P55735 322 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 PLAURQ03405 335 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 SNAPC2Q13487 334 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 RASIP1Q5U651 963 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 KRT40Q6A162 431 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 UNQ6494/PRO21346Q6UXR6 183 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 SLC39A5Q6ZMH5 540 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 DHX32Q7L7V1 743 aaKnown RBP3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 ZNF605Q86T29 641 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 DZIP1LQ8IYY4 767 aaKnown RBP3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 SIX5Q8N196 739 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 HSH2DQ96JZ2 352 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 GSX2Q9BZM3 304 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 TSPAN10Q9H1Z9 355 aaPredicted RBP3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 PDLIM7Q9NR12 457 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 LMCD1Q9NZU5 365 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 NIP7Q9Y221 180 aaKnown RBP eCLIP3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 YBX2Q9Y2T7 364 aaKnown RBP3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 USP3Q9Y6I4 520 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 SMG1Q96Q15 3661 aaKnown RBP3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 FBN2P35556 2912 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 KMT2EQ8IZD2 1858 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 POLQO75417 2590 aa3.05□□□□□ -1.92
TRAV1-1-201ENST00000542354 NAV3Q8IVL0 2385 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 RTL9Q8NET4 1388 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 ZNF521Q96K83 1311 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 SALL1Q9NSC2 1324 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 USP17L3A6NCW0 530 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 USP17L4A6NCW7 530 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 KIAA1324LA8MWY0 1029 aaPredicted RBP3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 PDHXO00330 501 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 KIAA0355O15063 1070 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 ATP9BO43861 1147 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 C1QTNF9P0C862 333 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 PLA2G2AP14555 144 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 GLB1P16278 677 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 PMLP29590 882 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 SSTR4P31391 388 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 MMP14P50281 582 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 GP2P55259 537 aaKnown RBP3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 LMNB2Q03252 620 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 PPIGQ13427 754 aaKnown RBP eCLIP3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 CPSF6Q16630 551 aaKnown RBP eCLIP3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 KRTAP21-3Q3LHN1 58 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 TRIM60Q495X7 471 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 TBCELQ5QJ74 424 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 USP17L2Q6R6M4 530 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 USP17L1Q7RTZ2 530 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 ANKRD23Q86SG2 305 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 PDZD3Q86UT5 571 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 CRACR2BQ8N4Y2 399 aaPredicted RBP3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 DCLK2Q8N568 766 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 CYP2W1Q8TAV3 490 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 SPACA7Q96KW9 195 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 C2orf49Q9BVC5 232 aaPredicted RBP3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 NYXQ9GZU5 481 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 ALG2Q9H553 416 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 PCDHA11Q9Y5I1 949 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 RAI2Q9Y5P3 530 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 PPP2R3BQ9Y5P8 575 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 CSADQ9Y600 493 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 FRYLO94915 3013 aa3.04□□□□□ -1.92
TRAV1-1-201ENST00000542354 EVC2Q86UK5 1308 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 A0A1B0GTL3 188 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 A0A1B0GUL7 405 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 J3QKU1 62 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 DNM1LO00429 736 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 WNT11O96014 354 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 CLTBP09497 229 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 FBLN1P23142 703 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 SOX18P35713 384 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 TLE2Q04725 743 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 FLIIQ13045 1269 aa3.03□□□□□ -1.92
TRAV1-1-201ENST00000542354 FZD5Q13467 585 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms