RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 PCMTD1Q96MG8 357 aaPredicted RBP19.56■□□□□ 0.72
RAB40C-205ENST00000539661 ZIM3Q96PE6 472 aa19.56■□□□□ 0.72
RAB40C-205ENST00000539661 TRMT112Q9UI30 125 aaKnown RBP19.56■□□□□ 0.72
RAB40C-205ENST00000539661 STARD3NLO95772 234 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 HLFQ16534 295 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 HELBQ8NG08 1087 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-205ENST00000539661 CCSER1Q9C0I3 900 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 PJA2O43164 708 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 KLK7P49862 253 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 MIIPQ5JXC2 388 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 DTHD1Q6ZMT9 781 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 IQCKQ8N0W5 287 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 SRBD1Q8N5C6 995 aaKnown RBP19.55■□□□□ 0.72
RAB40C-205ENST00000539661 GPATCH11Q8N954 259 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 NOC4LQ9BVI4 516 aaKnown RBP19.55■□□□□ 0.72
RAB40C-205ENST00000539661 CXorf56Q9H5V9 222 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 LRP2BPQ9P2M1 347 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 MTIF2P46199 727 aaKnown RBP19.55■□□□□ 0.72
RAB40C-205ENST00000539661 SLC7A5Q01650 507 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 PLCB4Q15147 1175 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 GDF3Q9NR23 364 aa19.55■□□□□ 0.72
RAB40C-205ENST00000539661 LSP1P33241 339 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 ATP6V1AP38606 617 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 MMP14P50281 582 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 NAP1L1P55209 391 aaKnown RBP19.54■□□□□ 0.72
RAB40C-205ENST00000539661 CFAP58Q5T655 872 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 TEX2Q8IWB9 1127 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 SMCR8Q8TEV9 937 aaPredicted RBP19.54■□□□□ 0.72
RAB40C-205ENST00000539661 H0YHG0 523 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 MOCS3O95396 460 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 CYP7A1P22680 504 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 KIF11P52732 1056 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 PAK2Q13177 524 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 COBLL1Q53SF7 1204 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 TTC19Q6DKK2 380 aaPredicted RBP19.54■□□□□ 0.72
RAB40C-205ENST00000539661 NFRKBQ6P4R8 1299 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 RABEP2Q9H5N1 569 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 MLXIPQ9HAP2 919 aa19.54■□□□□ 0.72
RAB40C-205ENST00000539661 MAGEB6P1A0A0J9YX57 407 aa19.53■□□□□ 0.72
RAB40C-205ENST00000539661 KRT26Q7Z3Y9 468 aa19.53■□□□□ 0.72
RAB40C-205ENST00000539661 DNAJC10Q8IXB1 793 aa19.53■□□□□ 0.72
RAB40C-205ENST00000539661 RNF10Q8N5U6 811 aaKnown RBP19.53■□□□□ 0.72
RAB40C-205ENST00000539661 RASSF8Q8NHQ8 419 aa19.53■□□□□ 0.72
RAB40C-205ENST00000539661 SDR42E1Q8WUS8 393 aa19.53■□□□□ 0.72
RAB40C-205ENST00000539661 BRIP1Q9BX63 1249 aa19.53■□□□□ 0.72
RAB40C-205ENST00000539661 SH3GLB2Q9NR46 395 aa19.53■□□□□ 0.72
RAB40C-205ENST00000539661 ARHGAP20Q9P2F6 1191 aa19.53■□□□□ 0.72
RAB40C-205ENST00000539661 UBA7P41226 1012 aa19.53■□□□□ 0.72
RAB40C-205ENST00000539661 MATR3P43243 847 aaKnown RBP eCLIP19.53■□□□□ 0.72
RAB40C-205ENST00000539661 CFAP221Q4G0U5 840 aa19.53■□□□□ 0.72
RAB40C-205ENST00000539661 BLIDQ8IZY5 108 aa19.53■□□□□ 0.72
RAB40C-205ENST00000539661 SHANK3Q9BYB0 1731 aa19.52■□□□□ 0.72
RAB40C-205ENST00000539661 LAD1O00515 517 aa19.52■□□□□ 0.72
RAB40C-205ENST00000539661 ADAMTS2O95450 1211 aa19.52■□□□□ 0.72
RAB40C-205ENST00000539661 DRP2Q13474 957 aa19.52■□□□□ 0.72
RAB40C-205ENST00000539661 NAA35Q5VZE5 725 aa19.52■□□□□ 0.72
RAB40C-205ENST00000539661 TMED8Q6PL24 325 aaPredicted RBP19.52■□□□□ 0.72
RAB40C-205ENST00000539661 PIGBQ92521 554 aa19.52■□□□□ 0.72
RAB40C-205ENST00000539661 PPP1R37O75864 691 aa19.52■□□□□ 0.71
RAB40C-205ENST00000539661 ANKRD40Q6AI12 368 aa19.52■□□□□ 0.71
RAB40C-205ENST00000539661 TYW1BQ6NUM6 668 aa19.52■□□□□ 0.71
RAB40C-205ENST00000539661 HINFPQ9BQA5 517 aa19.52■□□□□ 0.71
RAB40C-205ENST00000539661 CHRM1P11229 460 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-205ENST00000539661 C2CD5Q86YS7 1000 aa19.51■□□□□ 0.71
RAB40C-205ENST00000539661 RNPC3Q96LT9 517 aaKnown RBP19.51■□□□□ 0.71
RAB40C-205ENST00000539661 CCDC43Q96MW1 224 aaKnown RBP19.51■□□□□ 0.71
RAB40C-205ENST00000539661 TMOD3Q9NYL9 352 aa19.51■□□□□ 0.71
RAB40C-205ENST00000539661 ABCB11O95342 1321 aa19.51■□□□□ 0.71
RAB40C-205ENST00000539661 HMGB1P1B2RPK0 211 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-205ENST00000539661 PLEKP08567 350 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-205ENST00000539661 PTGISQ16647 500 aa19.51■□□□□ 0.71
RAB40C-205ENST00000539661 WHAMMQ8TF30 809 aa19.51■□□□□ 0.71
RAB40C-205ENST00000539661 ZNF473Q8WTR7 871 aaKnown RBP19.51■□□□□ 0.71
RAB40C-205ENST00000539661 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.51■□□□□ 0.717e-7■■■■■ 86.8
RAB40C-205ENST00000539661 TLR10Q9BXR5 811 aa19.51■□□□□ 0.71
RAB40C-205ENST00000539661 RBM12Q9NTZ6 932 aaKnown RBP19.51■□□□□ 0.71
RAB40C-205ENST00000539661 ZNF233A6NK53 670 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 AKR1B10O60218 316 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 NR1D1P20393 614 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 EIF4A3P38919 411 aaKnown RBP19.5■□□□□ 0.71
RAB40C-205ENST00000539661 PRPHP41219 470 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 CCDC84Q86UT8 332 aaPredicted RBP19.5■□□□□ 0.71
RAB40C-205ENST00000539661 SH2D3CQ8N5H7 860 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 NOX5Q96PH1 765 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 PCDHA4Q9UN74 947 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 SIK3Q9Y2K2 1263 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 CHUKO15111 745 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 KRT14P02533 472 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 CCDC172P0C7W6 258 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 MAGEA1P43355 309 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 ATP1A2P50993 1020 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 C7orf25Q9BPX7 421 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 RIOK1Q9BRS2 568 aaKnown RBP19.5■□□□□ 0.71
RAB40C-205ENST00000539661 VCPKMTQ9H867 229 aa19.5■□□□□ 0.71
RAB40C-205ENST00000539661 NHSL1Q5SYE7 1610 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 GRID2IPA4D2P6 1211 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 MYO1FO00160 1098 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 BCAMP50895 628 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 SMTNP53814 917 aa19.49■□□□□ 0.71
RAB40C-205ENST00000539661 PDE4DQ08499 809 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms