RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 PPP1R12BO60237 982 aaPredicted RBP22.98■■□□□ 1.27
CDH5-202ENST00000539168 ICAM1P05362 532 aa22.98■■□□□ 1.27
CDH5-202ENST00000539168 SMARCE1Q969G3 411 aa22.98■■□□□ 1.27
CDH5-202ENST00000539168 DDX25Q9UHL0 483 aaKnown RBP22.98■■□□□ 1.27
CDH5-202ENST00000539168 DACH1Q9UI36 760 aa22.98■■□□□ 1.27
CDH5-202ENST00000539168 BECN2A8MW95 431 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 MYL1P05976 194 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 SNAP25P60880 206 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 SPP2Q13103 211 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 PNOCQ13519 176 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 MTMR2Q13614 643 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 SH3RF1Q7Z6J0 888 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 CCDC84Q86UT8 332 aaPredicted RBP22.97■■□□□ 1.27
CDH5-202ENST00000539168 IQCA1LA6NCM1 817 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 GCOM1H8Y6P7 765 aaPredicted RBP22.97■■□□□ 1.27
CDH5-202ENST00000539168 SLC26A4O43511 780 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 POLR2MP0CAP2 368 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 VCAM1P19320 739 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 NF2P35240 595 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 SREBF1P36956 1147 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 SEMA3FQ13275 785 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 E2F4Q16254 413 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 CT47A1Q5JQC4 288 aaPredicted RBP22.97■■□□□ 1.27
CDH5-202ENST00000539168 ILDR2Q71H61 639 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 POTEDQ86YR6 584 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 IGSF22Q8N9C0 903 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.97■■□□□ 1.27
CDH5-202ENST00000539168 RBM46Q8TBY0 533 aaKnown RBP22.97■■□□□ 1.27
CDH5-202ENST00000539168 MBOAT7Q96N66 472 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 DISC1Q9NRI5 854 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 EMILIN3Q9NT22 766 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 MAP3K20Q9NYL2 800 aaKnown RBP22.97■■□□□ 1.27
CDH5-202ENST00000539168 RABGAP1Q9Y3P9 1069 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 PCDHA5Q9Y5H7 936 aa22.97■■□□□ 1.27
CDH5-202ENST00000539168 MAP3K9P80192 1104 aa22.96■■□□□ 1.27
CDH5-202ENST00000539168 CCDC174Q6PII3 467 aa22.96■■□□□ 1.27
CDH5-202ENST00000539168 LDHDQ86WU2 507 aa22.96■■□□□ 1.27
CDH5-202ENST00000539168 RASSF8Q8NHQ8 419 aa22.96■■□□□ 1.27
CDH5-202ENST00000539168 SPATA20Q8TB22 786 aa22.96■■□□□ 1.27
CDH5-202ENST00000539168 ZKSCAN4Q969J2 545 aaPredicted RBP22.96■■□□□ 1.27
CDH5-202ENST00000539168 TANGO6Q9C0B7 1094 aa22.96■■□□□ 1.27
CDH5-202ENST00000539168 PPP1R9AQ9ULJ8 1098 aa22.96■■□□□ 1.27
CDH5-202ENST00000539168 CTDP1Q9Y5B0 961 aaPredicted RBP22.96■■□□□ 1.27
CDH5-202ENST00000539168 SSC5DA1L4H1 1573 aa22.95■■□□□ 1.27
CDH5-202ENST00000539168 GLTPD2A6NH11 291 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 SMTNL1A8MU46 457 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 TBX3O15119 743 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 MARCH6O60337 910 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 TDP2O95551 362 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 CYP3A4P08684 503 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 STAT6P42226 847 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 SARSP49591 514 aaKnown RBP22.95■■□□□ 1.26
CDH5-202ENST00000539168 TPM4P67936 248 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 ARHGAP4P98171 946 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 IQCB1Q15051 598 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 PRAMEF18Q5VWM3 479 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 RRAGBQ5VZM2 374 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 MCF2L2Q86YR7 1114 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 SLFN12Q8IYM2 578 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 CRYGNQ8WXF5 182 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 TRIM44Q96DX7 344 aaPredicted RBP22.95■■□□□ 1.26
CDH5-202ENST00000539168 PAGE5Q96GU1 130 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 GSDMAQ96QA5 445 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 ZHX2Q9Y6X8 837 aa22.95■■□□□ 1.26
CDH5-202ENST00000539168 A0A087X0B3 334 aa22.94■■□□□ 1.26
CDH5-202ENST00000539168 ZBED4O75132 1171 aa22.94■■□□□ 1.26
CDH5-202ENST00000539168 USP2O75604 605 aaPredicted RBP22.94■■□□□ 1.26
CDH5-202ENST00000539168 CIITAP33076 1130 aa22.94■■□□□ 1.26
CDH5-202ENST00000539168 EPHX2P34913 555 aa22.94■■□□□ 1.26
CDH5-202ENST00000539168 C11orf57Q6ZUT1 292 aaPredicted RBP22.94■■□□□ 1.26
CDH5-202ENST00000539168 CABP7Q86V35 215 aa22.94■■□□□ 1.26
CDH5-202ENST00000539168 LUZP1Q86V48 1076 aa22.94■■□□□ 1.26
CDH5-202ENST00000539168 ERCC4Q92889 916 aaPredicted RBP22.94■■□□□ 1.26
CDH5-202ENST00000539168 CALML4Q96GE6 196 aa22.94■■□□□ 1.26
CDH5-202ENST00000539168 RPAP3Q9H6T3 665 aaPredicted RBP22.94■■□□□ 1.26
CDH5-202ENST00000539168 SLC38A10Q9HBR0 1119 aa22.94■■□□□ 1.26
CDH5-202ENST00000539168 FBXO28Q9NVF7 368 aa22.94■■□□□ 1.26
CDH5-202ENST00000539168 TMOD4Q9NZQ9 345 aa22.94■■□□□ 1.26
CDH5-202ENST00000539168 STK24Q9Y6E0 443 aa22.94■■□□□ 1.26
CDH5-202ENST00000539168 MYH7BA7E2Y1 1941 aa22.94■■□□□ 1.26
CDH5-202ENST00000539168 EDIL3O43854 480 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 FLOT1O75955 427 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 TXKP42681 527 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 IREB2P48200 963 aaKnown RBP22.93■■□□□ 1.26
CDH5-202ENST00000539168 Q4G0T1 1027 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 KRT26Q7Z3Y9 468 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 MLKLQ8NB16 471 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 CCPG1Q9ULG6 757 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 CSADQ9Y600 493 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 SCN4AP35499 1836 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 POLR2AP24928 1970 aaKnown RBP22.93■■□□□ 1.26
CDH5-202ENST00000539168 GOLGB1Q14789 3259 aaKnown RBP22.93■■□□□ 1.26
CDH5-202ENST00000539168 OPLAHO14841 1288 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 SLC37A4O43826 429 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 TECP42680 631 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 DPCR1Q3MIW9 517 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 PDXDC2PQ6P474 469 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 MAF1Q9H063 256 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 LRWD1Q9UFC0 647 aa22.93■■□□□ 1.26
CDH5-202ENST00000539168 GTPBP6O43824 516 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms