RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 AP3B2Q13367 1082 aa11.54□□□□□ -0.56
LDHA-216ENST00000538451 NONOQ15233 471 aaKnown RBP eCLIP11.54□□□□□ -0.56
LDHA-216ENST00000538451 SF3A1Q15459 793 aaKnown RBP11.54□□□□□ -0.56
LDHA-216ENST00000538451 SKOR2Q2VWA4 1001 aaPredicted RBP11.54□□□□□ -0.56
LDHA-216ENST00000538451 USH1GQ495M9 461 aa11.54□□□□□ -0.56
LDHA-216ENST00000538451 KIAA1755Q5JYT7 1200 aa11.54□□□□□ -0.56
LDHA-216ENST00000538451 MYSM1Q5VVJ2 828 aa11.54□□□□□ -0.56
LDHA-216ENST00000538451 CCDC174Q6PII3 467 aa11.54□□□□□ -0.56
LDHA-216ENST00000538451 HOMEZQ8IX15 550 aa11.54□□□□□ -0.56
LDHA-216ENST00000538451 SPATA32Q96LK8 384 aa11.54□□□□□ -0.56
LDHA-216ENST00000538451 MANSC4A6NHS7 340 aaPredicted RBP11.53□□□□□ -0.56
LDHA-216ENST00000538451 GCOM1H8Y6P7 765 aaPredicted RBP11.53□□□□□ -0.56
LDHA-216ENST00000538451 ATP2A1O14983 1001 aa11.53□□□□□ -0.56
LDHA-216ENST00000538451 POLR2MP0CAP2 368 aa11.53□□□□□ -0.56
LDHA-216ENST00000538451 HSPA8P11142 646 aaKnown RBP11.53□□□□□ -0.56
LDHA-216ENST00000538451 MCM4P33991 863 aa11.53□□□□□ -0.56
LDHA-216ENST00000538451 DNM1Q05193 864 aaKnown RBP11.53□□□□□ -0.56
LDHA-216ENST00000538451 ORC2Q13416 577 aaPredicted RBP11.53□□□□□ -0.56
LDHA-216ENST00000538451 FOXD4L6Q3SYB3 417 aaPredicted RBP11.53□□□□□ -0.56
LDHA-216ENST00000538451 SPRYD7Q5W111 196 aa11.53□□□□□ -0.56
LDHA-216ENST00000538451 FOXD4L3Q6VB84 417 aaPredicted RBP11.53□□□□□ -0.56
LDHA-216ENST00000538451 CPXCR1Q8N123 301 aa11.53□□□□□ -0.56
LDHA-216ENST00000538451 KCNG4Q8TDN1 519 aa11.53□□□□□ -0.56
LDHA-216ENST00000538451 ANP32EQ9BTT0 268 aa11.53□□□□□ -0.56
LDHA-216ENST00000538451 TEX13BQ9BXU2 312 aa11.53□□□□□ -0.56
LDHA-216ENST00000538451 GJB4Q9NTQ9 266 aa11.53□□□□□ -0.56
LDHA-216ENST00000538451 FBXO28Q9NVF7 368 aa11.53□□□□□ -0.56
LDHA-216ENST00000538451 POLR3EQ9NVU0 708 aa11.53□□□□□ -0.56
LDHA-216ENST00000538451 FBXO40Q9UH90 709 aa11.53□□□□□ -0.56
LDHA-216ENST00000538451 RABGAP1Q9Y3P9 1069 aa11.53□□□□□ -0.56
LDHA-216ENST00000538451 CCL15-CCL14A0A0B4J2E2 113 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 YEATS4O95619 227 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 SREBF2Q12772 1141 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 STK38Q15208 465 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 CCL15Q16663 113 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 SLC35G1Q2M3R5 365 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 LBX2Q6XYB7 198 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 PIK3AP1Q6ZUJ8 805 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 ANKRD23Q86SG2 305 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 TNS4Q8IZW8 715 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 SMCR8Q8TEV9 937 aaPredicted RBP11.52□□□□□ -0.57
LDHA-216ENST00000538451 ZIC5Q96T25 663 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 ZCCHC17Q9NP64 241 aaKnown RBP11.52□□□□□ -0.57
LDHA-216ENST00000538451 SAGE1Q9NXZ1 904 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 RTEL1Q9NZ71 1219 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 ADAMTS5Q9UNA0 930 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 OTOFQ9HC10 1997 aa11.52□□□□□ -0.57
LDHA-216ENST00000538451 ELP1O95163 1332 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 PHIPQ8WWQ0 1821 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 PIK3CDO00329 1044 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 FIBPO43427 364 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 SLC25A27O95847 323 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 ALAS1P13196 640 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 STAT3P40763 770 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 GCLCP48506 637 aaPredicted RBP11.51□□□□□ -0.57
LDHA-216ENST00000538451 CCNA1P78396 465 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 NR5A1Q13285 461 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 PLS1Q14651 629 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 NFKBIBQ15653 356 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 ANO1Q5XXA6 986 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 IFNL1Q8IU54 200 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 CCAR1Q8IX12 1150 aaKnown RBP11.51□□□□□ -0.57
LDHA-216ENST00000538451 CHST13Q8NET6 341 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 ATG4CQ96DT6 458 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 DCBLD2Q96PD2 775 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 PARK7Q99497 189 aaKnown RBP11.51□□□□□ -0.57
LDHA-216ENST00000538451 MPHOSPH6Q99547 160 aaKnown RBP11.51□□□□□ -0.57
LDHA-216ENST00000538451 PCDHA6Q9UN73 950 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 PCDHA8Q9Y5H6 950 aa11.51□□□□□ -0.57
LDHA-216ENST00000538451 BAZ2BQ9UIF8 2168 aaKnown RBP11.51□□□□□ -0.57
LDHA-216ENST00000538451 SPDYE16A6NNV3 312 aaPredicted RBP11.5□□□□□ -0.57
LDHA-216ENST00000538451 B4DLN1 442 aa11.5□□□□□ -0.57
LDHA-216ENST00000538451 KIF28PB7ZC32 967 aa11.5□□□□□ -0.57
LDHA-216ENST00000538451 LAD1O00515 517 aa11.5□□□□□ -0.57
LDHA-216ENST00000538451 PPP1R11O60927 126 aaPredicted RBP11.5□□□□□ -0.57
LDHA-216ENST00000538451 PRPF40AO75400 957 aaKnown RBP11.5□□□□□ -0.57
LDHA-216ENST00000538451 MBD3O95983 291 aa11.5□□□□□ -0.57
LDHA-216ENST00000538451 CFBP00751 764 aa11.5□□□□□ -0.57
LDHA-216ENST00000538451 GCFC2P16383 781 aaKnown RBP11.5□□□□□ -0.57
LDHA-216ENST00000538451 SNAP25P60880 206 aa11.5□□□□□ -0.57
LDHA-216ENST00000538451 HERVK_113P62684 666 aa11.5□□□□□ -0.57
LDHA-216ENST00000538451 TREML2Q5T2D2 321 aa11.5□□□□□ -0.57
LDHA-216ENST00000538451 SNRNP48Q6IEG0 339 aaKnown RBP11.5□□□□□ -0.57
LDHA-216ENST00000538451 NEK8Q86SG6 692 aa11.5□□□□□ -0.57
LDHA-216ENST00000538451 TRERF1Q96PN7 1200 aa11.5□□□□□ -0.57
LDHA-216ENST00000538451 ASCC2Q9H1I8 757 aaPredicted RBP11.5□□□□□ -0.57
LDHA-216ENST00000538451 ACAD9Q9H845 621 aa11.5□□□□□ -0.57
LDHA-216ENST00000538451 RAVER2Q9HCJ3 691 aaKnown RBP11.5□□□□□ -0.57
LDHA-216ENST00000538451 TFIP11Q9UBB9 837 aaKnown RBP11.5□□□□□ -0.57
LDHA-216ENST00000538451 BIN2Q9UBW5 565 aaPredicted RBP11.5□□□□□ -0.57
LDHA-216ENST00000538451 M0R2N6 131 aa11.49□□□□□ -0.57
LDHA-216ENST00000538451 PDHXO00330 501 aa11.49□□□□□ -0.57
LDHA-216ENST00000538451 SPTLC2O15270 562 aa11.49□□□□□ -0.57
LDHA-216ENST00000538451 ME1P48163 572 aa11.49□□□□□ -0.57
LDHA-216ENST00000538451 NASPP49321 788 aaPredicted RBP11.49□□□□□ -0.57
LDHA-216ENST00000538451 USP11P51784 963 aa11.49□□□□□ -0.57
LDHA-216ENST00000538451 UBE2HP62256 183 aa11.49□□□□□ -0.57
LDHA-216ENST00000538451 CEBPZQ03701 1054 aaKnown RBP11.49□□□□□ -0.57
LDHA-216ENST00000538451 MKRN3Q13064 507 aaKnown RBP11.49□□□□□ -0.57
LDHA-216ENST00000538451 DGKZQ13574 1117 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms