RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CYTH3O43739 400 aa20■□□□□ 0.79
SFSWAP-205ENST00000537164 DHX16O60231 1041 aaKnown RBP20■□□□□ 0.79
SFSWAP-205ENST00000537164 PPP1R11O60927 126 aaPredicted RBP20■□□□□ 0.79
SFSWAP-205ENST00000537164 CALML3P27482 149 aa20■□□□□ 0.79
SFSWAP-205ENST00000537164 SMARCA1P28370 1054 aa20■□□□□ 0.79
SFSWAP-205ENST00000537164 TNFAIP2Q03169 654 aa20■□□□□ 0.79
SFSWAP-205ENST00000537164 IQSEC1Q6DN90 963 aa20■□□□□ 0.79
SFSWAP-205ENST00000537164 CHRDL2Q6WN34 429 aa20■□□□□ 0.79
SFSWAP-205ENST00000537164 MCF2L2Q86YR7 1114 aa20■□□□□ 0.79
SFSWAP-205ENST00000537164 ZNF654Q8IZM8 581 aa20■□□□□ 0.79
SFSWAP-205ENST00000537164 KCNB2Q92953 911 aa20■□□□□ 0.79
SFSWAP-205ENST00000537164 GPHNQ9NQX3 736 aaPredicted RBP20■□□□□ 0.79
SFSWAP-205ENST00000537164 Q9Y3F1 56 aa20■□□□□ 0.79
SFSWAP-205ENST00000537164 DDX49Q9Y6V7 483 aaKnown RBP20■□□□□ 0.79
SFSWAP-205ENST00000537164 LAMA3Q16787 3333 aa20■□□□□ 0.79
SFSWAP-205ENST00000537164 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 A0A1W2PQ45 241 aaPredicted RBP19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 A0A1W2PQY0 241 aa19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 RBM47A0AV96 593 aaKnown RBP19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 OPLAHO14841 1288 aa19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 CTAGE5O15320 804 aa19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 CENPBP07199 599 aaPredicted RBP19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 ATN1P54259 1190 aaPredicted RBP19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 TRAF1Q13077 416 aa19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 SGMS1Q86VZ5 419 aa19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 RASEFQ8IZ41 740 aa19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 SAMD3Q8N6K7 520 aa19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 TBC1D5Q92609 795 aa19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 GDF15Q99988 308 aa19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 MAP3K20Q9NYL2 800 aaKnown RBP19.99■□□□□ 0.79
SFSWAP-205ENST00000537164 MYCNP04198 464 aaPredicted RBP19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 BMP8BP34820 402 aa19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 ACLYP53396 1101 aa19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 RTP1P59025 263 aa19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 EXOSC10Q01780 885 aaKnown RBP19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 KCNA10Q16322 511 aa19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 FBXO16Q8IX29 292 aaPredicted RBP19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 PCSK9Q8NBP7 692 aaKnown RBP19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 SYTL5Q8TDW5 730 aaPredicted RBP19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 NEK1Q96PY6 1258 aa19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 MPHOSPH6Q99547 160 aaKnown RBP19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 SPZ1Q9BXG8 430 aa19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 SPC25Q9HBM1 224 aa19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 PDGFCQ9NRA1 345 aa19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 KIAA1217Q5T5P2 1943 aa19.98■□□□□ 0.79
SFSWAP-205ENST00000537164 PNMA6FA0A0J9YX94 578 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 A0A1W2PPC1 479 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 MYADML2A6NDP7 307 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 B4DLN1 442 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 C6orf222P0C671 652 aaPredicted RBP19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 SMPD1P17405 629 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 KIF5BP33176 963 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 HSD17B4P51659 736 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 MRPL12P52815 198 aaKnown RBP19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 KRT32Q14532 448 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 NUP133Q8WUM0 1156 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 FERMT2Q96AC1 680 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 PIGSQ96S52 555 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 COL20A1Q9P218 1284 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 RBM27Q9P2N5 1060 aaKnown RBP19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 ZMYND8Q9ULU4 1186 aaPredicted RBP19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 PCDHA1Q9Y5I3 950 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 LTBP2Q14767 1821 aa19.97■□□□□ 0.79
SFSWAP-205ENST00000537164 LAMA2P24043 3122 aaKnown RBP19.96■□□□□ 0.79
SFSWAP-205ENST00000537164 CCDC69A6NI79 296 aa19.96■□□□□ 0.79
SFSWAP-205ENST00000537164 EPB41L2O43491 1005 aaKnown RBP19.96■□□□□ 0.79
SFSWAP-205ENST00000537164 CALM1P0DP23 149 aa19.96■□□□□ 0.79
SFSWAP-205ENST00000537164 CALM2P0DP24 149 aa19.96■□□□□ 0.79
SFSWAP-205ENST00000537164 CALM3P0DP25 149 aa19.96■□□□□ 0.79
SFSWAP-205ENST00000537164 ADCK5Q3MIX3 580 aa19.96■□□□□ 0.79
SFSWAP-205ENST00000537164 DUSP28Q4G0W2 176 aa19.96■□□□□ 0.79
SFSWAP-205ENST00000537164 DHX32Q7L7V1 743 aaKnown RBP19.96■□□□□ 0.79
SFSWAP-205ENST00000537164 EEPD1Q7L9B9 569 aa19.96■□□□□ 0.79
SFSWAP-205ENST00000537164 CTCFLQ8NI51 663 aaPredicted RBP19.96■□□□□ 0.79
SFSWAP-205ENST00000537164 LZTS2Q9BRK4 669 aa19.96■□□□□ 0.79
SFSWAP-205ENST00000537164 ELP1O95163 1332 aa19.96■□□□□ 0.79
SFSWAP-205ENST00000537164 SZT2Q5T011 3432 aa19.95■□□□□ 0.78
SFSWAP-205ENST00000537164 ASGR1P07306 291 aa19.95■□□□□ 0.78
SFSWAP-205ENST00000537164 SYN1P17600 705 aa19.95■□□□□ 0.78
SFSWAP-205ENST00000537164 HSPA4P34932 840 aa19.95■□□□□ 0.78
SFSWAP-205ENST00000537164 GNAQP50148 359 aa19.95■□□□□ 0.78
SFSWAP-205ENST00000537164 IRX5P78411 483 aaPredicted RBP19.95■□□□□ 0.78
SFSWAP-205ENST00000537164 PDE4DQ08499 809 aa19.95■□□□□ 0.78
SFSWAP-205ENST00000537164 GNASQ5JWF2 1037 aa19.95■□□□□ 0.78
SFSWAP-205ENST00000537164 TLK2Q86UE8 772 aa19.95■□□□□ 0.78
SFSWAP-205ENST00000537164 NSUN6Q8TEA1 469 aaKnown RBP19.95■□□□□ 0.78
SFSWAP-205ENST00000537164 TAAR1Q96RJ0 339 aa19.95■□□□□ 0.78
SFSWAP-205ENST00000537164 IWS1Q96ST2 819 aa19.95■□□□□ 0.78
SFSWAP-205ENST00000537164 MYL10Q9BUA6 226 aa19.95■□□□□ 0.78
SFSWAP-205ENST00000537164 REC8O95072 547 aa19.94■□□□□ 0.78
SFSWAP-205ENST00000537164 HMGB1P09429 215 aaKnown RBP19.94■□□□□ 0.78
SFSWAP-205ENST00000537164 TRIM60Q495X7 471 aa19.94■□□□□ 0.78
SFSWAP-205ENST00000537164 TMEM63BQ5T3F8 832 aa19.94■□□□□ 0.78
SFSWAP-205ENST00000537164 NFXL1Q6ZNB6 911 aa19.94■□□□□ 0.78
SFSWAP-205ENST00000537164 ANKRD33Q7Z3H0 272 aa19.94■□□□□ 0.78
SFSWAP-205ENST00000537164 HOMER1Q86YM7 354 aa19.94■□□□□ 0.78
SFSWAP-205ENST00000537164 TOX2Q96NM4 488 aa19.94■□□□□ 0.78
SFSWAP-205ENST00000537164 RMDN3Q96TC7 470 aa19.94■□□□□ 0.78
SFSWAP-205ENST00000537164 WDR11Q9BZH6 1224 aa19.94■□□□□ 0.78
SFSWAP-205ENST00000537164 ATP11BQ9Y2G3 1177 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms