RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 MAMDC4Q6UXC1 1216 aa20.71■□□□□ 0.91
DDX55-204ENST00000536079 RGS22Q8NE09 1264 aa20.71■□□□□ 0.91
DDX55-204ENST00000536079 SYTL5Q8TDW5 730 aaPredicted RBP20.71■□□□□ 0.91
DDX55-204ENST00000536079 DEFB118Q96PH6 123 aa20.71■□□□□ 0.91
DDX55-204ENST00000536079 TMEM106CQ9BVX2 250 aa20.71■□□□□ 0.91
DDX55-204ENST00000536079 HMX1Q9NP08 348 aaPredicted RBP20.71■□□□□ 0.91
DDX55-204ENST00000536079 PLXNA1Q9UIW2 1896 aa20.71■□□□□ 0.91
DDX55-204ENST00000536079 GJB1P08034 283 aa20.7■□□□□ 0.9
DDX55-204ENST00000536079 ZNF865P0CJ78 1059 aaPredicted RBP20.7■□□□□ 0.9
DDX55-204ENST00000536079 RBM25P49756 843 aaKnown RBP20.7■□□□□ 0.9
DDX55-204ENST00000536079 NEK4P51957 841 aa20.7■□□□□ 0.9
DDX55-204ENST00000536079 STK3Q13188 491 aa20.7■□□□□ 0.9
DDX55-204ENST00000536079 NTRK3Q16288 839 aa20.7■□□□□ 0.9
DDX55-204ENST00000536079 ARMCX2Q7L311 632 aa20.7■□□□□ 0.9
DDX55-204ENST00000536079 ZNF467Q7Z7K2 595 aaPredicted RBP20.7■□□□□ 0.9
DDX55-204ENST00000536079 KATNBL1Q9H079 304 aa20.7■□□□□ 0.9
DDX55-204ENST00000536079 V9GY48 417 aaPredicted RBP20.7■□□□□ 0.9
DDX55-204ENST00000536079 LARGE1O95461 756 aa20.69■□□□□ 0.9
DDX55-204ENST00000536079 ANO1Q5XXA6 986 aa20.69■□□□□ 0.9
DDX55-204ENST00000536079 LHX8Q68G74 356 aa20.69■□□□□ 0.9
DDX55-204ENST00000536079 NOL8Q76FK4 1167 aaKnown RBP20.69■□□□□ 0.9
DDX55-204ENST00000536079 U2AF1L4Q8WU68 220 aaKnown RBP20.69■□□□□ 0.9
DDX55-204ENST00000536079 GPKOWQ92917 476 aaPredicted RBP eCLIP20.69■□□□□ 0.9
DDX55-204ENST00000536079 ZNF274Q96GC6 653 aaPredicted RBP20.69■□□□□ 0.9
DDX55-204ENST00000536079 TAAR1Q96RJ0 339 aa20.69■□□□□ 0.9
DDX55-204ENST00000536079 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.69■□□□□ 0.9
DDX55-204ENST00000536079 SGPL1O95470 568 aa20.68■□□□□ 0.9
DDX55-204ENST00000536079 CFBP00751 764 aa20.68■□□□□ 0.9
DDX55-204ENST00000536079 HOXA13P31271 388 aaPredicted RBP20.68■□□□□ 0.9
DDX55-204ENST00000536079 GJA8P48165 433 aa20.68■□□□□ 0.9
DDX55-204ENST00000536079 ALDH5A1P51649 535 aaPredicted RBP20.68■□□□□ 0.9
DDX55-204ENST00000536079 HSD17B4P51659 736 aa20.68■□□□□ 0.9
DDX55-204ENST00000536079 WWC2Q6AWC2 1192 aa20.68■□□□□ 0.9
DDX55-204ENST00000536079 TYW1BQ6NUM6 668 aa20.68■□□□□ 0.9
DDX55-204ENST00000536079 PHKBQ93100 1093 aa20.68■□□□□ 0.9
DDX55-204ENST00000536079 BACH2Q9BYV9 841 aa20.68■□□□□ 0.9
DDX55-204ENST00000536079 SEC63Q9UGP8 760 aaKnown RBP20.68■□□□□ 0.9
DDX55-204ENST00000536079 SYNGAP1Q96PV0 1343 aa20.68■□□□□ 0.9
DDX55-204ENST00000536079 CNGA1P29973 690 aa20.67■□□□□ 0.9
DDX55-204ENST00000536079 GHRHRQ02643 423 aa20.67■□□□□ 0.9
DDX55-204ENST00000536079 MSL3Q8N5Y2 521 aaKnown RBP20.67■□□□□ 0.9
DDX55-204ENST00000536079 LENG1Q96BZ8 264 aaPredicted RBP20.67■□□□□ 0.9
DDX55-204ENST00000536079 CRISPLD2Q9H0B8 497 aa20.67■□□□□ 0.9
DDX55-204ENST00000536079 MYH6P13533 1939 aa20.66■□□□□ 0.9
DDX55-204ENST00000536079 KIAA0100Q14667 2235 aaKnown RBP20.66■□□□□ 0.9
DDX55-204ENST00000536079 ADCY6O43306 1168 aa20.66■□□□□ 0.9
DDX55-204ENST00000536079 PTGS1P23219 599 aa20.66■□□□□ 0.9
DDX55-204ENST00000536079 SCRN1Q12765 414 aa20.66■□□□□ 0.9
DDX55-204ENST00000536079 PKN1Q16512 942 aa20.66■□□□□ 0.9
DDX55-204ENST00000536079 EEPD1Q7L9B9 569 aa20.66■□□□□ 0.9
DDX55-204ENST00000536079 MCF2L2Q86YR7 1114 aa20.66■□□□□ 0.9
DDX55-204ENST00000536079 MORC4Q8TE76 937 aa20.66■□□□□ 0.9
DDX55-204ENST00000536079 MKI67P46013 3256 aaKnown RBP20.66■□□□□ 0.9
DDX55-204ENST00000536079 ADAMTS3O15072 1205 aa20.65■□□□□ 0.9
DDX55-204ENST00000536079 MNX1P50219 401 aaPredicted RBP20.65■□□□□ 0.9
DDX55-204ENST00000536079 ACVR2BQ13705 512 aa20.65■□□□□ 0.9
DDX55-204ENST00000536079 PPP2R5BQ15173 497 aa20.65■□□□□ 0.9
DDX55-204ENST00000536079 ME3Q16798 604 aa20.65■□□□□ 0.9
DDX55-204ENST00000536079 TMEM63BQ5T3F8 832 aa20.65■□□□□ 0.9
DDX55-204ENST00000536079 HEATR3Q7Z4Q2 680 aa20.65■□□□□ 0.9
DDX55-204ENST00000536079 PDGFCQ9NRA1 345 aa20.65■□□□□ 0.9
DDX55-204ENST00000536079 DDX20Q9UHI6 824 aaKnown RBP20.65■□□□□ 0.9
DDX55-204ENST00000536079 ZHX1Q9UKY1 873 aaPredicted RBP20.65■□□□□ 0.9
DDX55-204ENST00000536079 RBBP6Q7Z6E9 1792 aaKnown RBP20.64■□□□□ 0.9
DDX55-204ENST00000536079 CCDC196A0A1B0GTZ2 297 aa20.64■□□□□ 0.89
DDX55-204ENST00000536079 STXBP3O00186 592 aa20.64■□□□□ 0.89
DDX55-204ENST00000536079 SEPT4O43236 478 aa20.64■□□□□ 0.89
DDX55-204ENST00000536079 PFKFB2O60825 505 aa20.64■□□□□ 0.89
DDX55-204ENST00000536079 TFRCP02786 760 aaKnown RBP20.64■□□□□ 0.89
DDX55-204ENST00000536079 IFNAR1P17181 557 aa20.64■□□□□ 0.89
DDX55-204ENST00000536079 EDNRBP24530 442 aa20.64■□□□□ 0.89
DDX55-204ENST00000536079 ST3GAL1Q11201 340 aa20.64■□□□□ 0.89
DDX55-204ENST00000536079 USP17L6PQ6QN14 398 aa20.64■□□□□ 0.89
DDX55-204ENST00000536079 FBXO16Q8IX29 292 aaPredicted RBP20.64■□□□□ 0.89
DDX55-204ENST00000536079 NECAB1Q8N987 351 aa20.64■□□□□ 0.89
DDX55-204ENST00000536079 TBC1D32Q96NH3 1257 aa20.64■□□□□ 0.89
DDX55-204ENST00000536079 MCM3APO60318 1980 aa20.64■□□□□ 0.89
DDX55-204ENST00000536079 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.63■□□□□ 0.89
DDX55-204ENST00000536079 ASB14A6NK59 587 aa20.63■□□□□ 0.89
DDX55-204ENST00000536079 GCOM1H8Y6P7 765 aaPredicted RBP20.63■□□□□ 0.89
DDX55-204ENST00000536079 MEIS2O14770 477 aa20.63■□□□□ 0.89
DDX55-204ENST00000536079 PRPF3O43395 683 aaKnown RBP20.63■□□□□ 0.89
DDX55-204ENST00000536079 CTDNEP1O95476 244 aa20.63■□□□□ 0.89
DDX55-204ENST00000536079 POLR2MP0CAP2 368 aa20.63■□□□□ 0.89
DDX55-204ENST00000536079 RGS19P49795 217 aa20.63■□□□□ 0.89
DDX55-204ENST00000536079 PFKFB3Q16875 520 aaPredicted RBP20.63■□□□□ 0.89
DDX55-204ENST00000536079 TAPT1Q6NXT6 567 aa20.63■□□□□ 0.89
DDX55-204ENST00000536079 DIS3LQ8TF46 1054 aaKnown RBP20.63■□□□□ 0.89
DDX55-204ENST00000536079 SLC26A6Q9BXS9 759 aa20.63■□□□□ 0.89
DDX55-204ENST00000536079 NRBP1Q9UHY1 535 aa20.63■□□□□ 0.89
DDX55-204ENST00000536079 OGDHLQ9ULD0 1010 aa20.63■□□□□ 0.89
DDX55-204ENST00000536079 CNPY2Q9Y2B0 182 aa20.63■□□□□ 0.89
DDX55-204ENST00000536079 EIF2AK2P19525 551 aaKnown RBP20.62■□□□□ 0.89
DDX55-204ENST00000536079 IRX5P78411 483 aaPredicted RBP20.62■□□□□ 0.89
DDX55-204ENST00000536079 UBE2SQ16763 222 aa20.62■□□□□ 0.89
DDX55-204ENST00000536079 UBE2Q1Q7Z7E8 422 aa20.62■□□□□ 0.89
DDX55-204ENST00000536079 FCHSD1Q86WN1 690 aa20.62■□□□□ 0.89
DDX55-204ENST00000536079 DNERQ8NFT8 737 aa20.62■□□□□ 0.89
DDX55-204ENST00000536079 IL31RAQ8NI17 732 aa20.62■□□□□ 0.89
DDX55-204ENST00000536079 RMDN3Q96TC7 470 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms