RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 GPHNQ9NQX3 736 aaPredicted RBP20.96■□□□□ 0.95
PVT1-220ENST00000524165 ZFHX2Q9C0A1 2572 aaPredicted RBP20.96■□□□□ 0.95
PVT1-220ENST00000524165 LCTP09848 1927 aa20.96■□□□□ 0.95
PVT1-220ENST00000524165 C5orf42Q9H799 3197 aa20.95■□□□□ 0.94
PVT1-220ENST00000524165 BCAR3O75815 825 aa20.95■□□□□ 0.94
PVT1-220ENST00000524165 NBPF20Q3BBV1 942 aa20.95■□□□□ 0.94
PVT1-220ENST00000524165 KIAA1211Q6ZU35 1233 aa20.95■□□□□ 0.94
PVT1-220ENST00000524165 EEPD1Q7L9B9 569 aa20.95■□□□□ 0.94
PVT1-220ENST00000524165 BMP8AQ7Z5Y6 402 aa20.95■□□□□ 0.94
PVT1-220ENST00000524165 MRPL38Q96DV4 380 aaKnown RBP20.95■□□□□ 0.94
PVT1-220ENST00000524165 DDRGK1Q96HY6 314 aa20.95■□□□□ 0.94
PVT1-220ENST00000524165 MYL3P08590 195 aa20.94■□□□□ 0.94
PVT1-220ENST00000524165 IRS1P35568 1242 aa20.94■□□□□ 0.94
PVT1-220ENST00000524165 DEFB103AP81534 67 aa20.94■□□□□ 0.94
PVT1-220ENST00000524165 PKN1Q16512 942 aa20.94■□□□□ 0.94
PVT1-220ENST00000524165 HERC4Q5GLZ8 1057 aaPredicted RBP20.94■□□□□ 0.94
PVT1-220ENST00000524165 MORC4Q8TE76 937 aa20.94■□□□□ 0.94
PVT1-220ENST00000524165 PABPC5Q96DU9 382 aaKnown RBP20.94■□□□□ 0.94
PVT1-220ENST00000524165 RNF146Q9NTX7 359 aa20.94■□□□□ 0.94
PVT1-220ENST00000524165 CACNA1HO95180 2353 aa20.94■□□□□ 0.94
PVT1-220ENST00000524165 IPO8O15397 1037 aaKnown RBP20.93■□□□□ 0.94
PVT1-220ENST00000524165 MBD4O95243 580 aa20.93■□□□□ 0.94
PVT1-220ENST00000524165 TRIM27P14373 513 aa20.93■□□□□ 0.94
PVT1-220ENST00000524165 COL19A1Q14993 1142 aa20.93■□□□□ 0.94
PVT1-220ENST00000524165 PTPROQ16827 1216 aa20.93■□□□□ 0.94
PVT1-220ENST00000524165 TKFCQ3LXA3 575 aa20.93■□□□□ 0.94
PVT1-220ENST00000524165 CNKSR3Q6P9H4 555 aa20.93■□□□□ 0.94
PVT1-220ENST00000524165 CCDC155Q8N6L0 562 aa20.93■□□□□ 0.94
PVT1-220ENST00000524165 FBXO22Q8NEZ5 403 aa20.93■□□□□ 0.94
PVT1-220ENST00000524165 CAGE1Q8TC20 777 aa20.93■□□□□ 0.94
PVT1-220ENST00000524165 AFAP1L1Q8TED9 768 aa20.93■□□□□ 0.94
PVT1-220ENST00000524165 DDX49Q9Y6V7 483 aaKnown RBP20.93■□□□□ 0.94
PVT1-220ENST00000524165 ZBED9Q6R2W3 1325 aa20.93■□□□□ 0.94
PVT1-220ENST00000524165 GFRA3O60609 400 aa20.92■□□□□ 0.94
PVT1-220ENST00000524165 PARNO95453 639 aaKnown RBP20.92■□□□□ 0.94
PVT1-220ENST00000524165 TIGD5Q53EQ6 642 aa20.92■□□□□ 0.94
PVT1-220ENST00000524165 AACSQ86V21 672 aa20.92■□□□□ 0.94
PVT1-220ENST00000524165 RPAP2Q8IXW5 612 aaPredicted RBP20.92■□□□□ 0.94
PVT1-220ENST00000524165 SYNPO2Q9UMS6 1093 aa20.92■□□□□ 0.94
PVT1-220ENST00000524165 NOD1Q9Y239 953 aa20.92■□□□□ 0.94
PVT1-220ENST00000524165 ABHD14A-ACY1A0A1B0GW23 586 aa20.91■□□□□ 0.94
PVT1-220ENST00000524165 KPNA6O60684 536 aa20.91■□□□□ 0.94
PVT1-220ENST00000524165 EFCAB14O75071 495 aa20.91■□□□□ 0.94
PVT1-220ENST00000524165 PTPRZ1P23471 2315 aaPredicted RBP20.91■□□□□ 0.94
PVT1-220ENST00000524165 GPNMBQ14956 572 aa20.91■□□□□ 0.94
PVT1-220ENST00000524165 BRDTQ58F21 947 aaPredicted RBP20.91■□□□□ 0.94
PVT1-220ENST00000524165 IER5LQ5T953 404 aa20.91■□□□□ 0.94
PVT1-220ENST00000524165 CTR9Q6PD62 1173 aa20.91■□□□□ 0.94
PVT1-220ENST00000524165 MKL1Q969V6 931 aa20.91■□□□□ 0.94
PVT1-220ENST00000524165 CRBNQ96SW2 442 aa20.91■□□□□ 0.94
PVT1-220ENST00000524165 POP1Q99575 1024 aaKnown RBP20.91■□□□□ 0.94
PVT1-220ENST00000524165 WDR11Q9BZH6 1224 aa20.91■□□□□ 0.94
PVT1-220ENST00000524165 CLIP2Q9UDT6 1046 aa20.91■□□□□ 0.94
PVT1-220ENST00000524165 KMT2EQ8IZD2 1858 aa20.9■□□□□ 0.94
PVT1-220ENST00000524165 GOLIM4O00461 696 aa20.9■□□□□ 0.94
PVT1-220ENST00000524165 CXCL10P02778 98 aa20.9■□□□□ 0.94
PVT1-220ENST00000524165 RASA1P20936 1047 aa20.9■□□□□ 0.94
PVT1-220ENST00000524165 TCF15Q12870 199 aa20.9■□□□□ 0.94
PVT1-220ENST00000524165 EDAQ92838 391 aa20.9■□□□□ 0.94
PVT1-220ENST00000524165 TRERF1Q96PN7 1200 aa20.9■□□□□ 0.94
PVT1-220ENST00000524165 C17orf80Q9BSJ5 609 aa20.9■□□□□ 0.94
PVT1-220ENST00000524165 CYP39A1Q9NYL5 469 aa20.9■□□□□ 0.94
PVT1-220ENST00000524165 MUTYHQ9UIF7 546 aa20.9■□□□□ 0.94
PVT1-220ENST00000524165 MYH7P12883 1935 aa20.9■□□□□ 0.94
PVT1-220ENST00000524165 MICAL3Q7RTP6 2002 aa20.89■□□□□ 0.93
PVT1-220ENST00000524165 RAD50Q92878 1312 aa20.89■□□□□ 0.93
PVT1-220ENST00000524165 RBM47A0AV96 593 aaKnown RBP20.89■□□□□ 0.93
PVT1-220ENST00000524165 ADD2P35612 726 aa20.89■□□□□ 0.93
PVT1-220ENST00000524165 BANK1Q8NDB2 785 aa20.89■□□□□ 0.93
PVT1-220ENST00000524165 GMCL1P1Q8NEA9 526 aa20.89■□□□□ 0.93
PVT1-220ENST00000524165 OR6J1Q8NGC5 347 aa20.89■□□□□ 0.93
PVT1-220ENST00000524165 ARPP21Q9UBL0 812 aaPredicted RBP20.89■□□□□ 0.93
PVT1-220ENST00000524165 INSL6Q9Y581 213 aa20.89■□□□□ 0.93
PVT1-220ENST00000524165 IGKV6D-41A0A0C4DH26 115 aa20.88■□□□□ 0.93
PVT1-220ENST00000524165 SELPP16109 830 aa20.88■□□□□ 0.93
PVT1-220ENST00000524165 LRRC8DQ7L1W4 858 aa20.88■□□□□ 0.93
PVT1-220ENST00000524165 ERC1Q8IUD2 1116 aa20.88■□□□□ 0.93
PVT1-220ENST00000524165 SAMD11Q96NU1 681 aa20.88■□□□□ 0.93
PVT1-220ENST00000524165 TNNQ9UQP3 1299 aa20.88■□□□□ 0.93
PVT1-220ENST00000524165 LOC102724159A0A0B4J2E5 919 aa20.87■□□□□ 0.93
PVT1-220ENST00000524165 A6NJR5 290 aa20.87■□□□□ 0.93
PVT1-220ENST00000524165 BMP3P12645 472 aa20.87■□□□□ 0.93
PVT1-220ENST00000524165 STAT2P52630 851 aa20.87■□□□□ 0.93
PVT1-220ENST00000524165 RBL2Q08999 1139 aa20.87■□□□□ 0.93
PVT1-220ENST00000524165 PWP2Q15269 919 aaKnown RBP20.87■□□□□ 0.93
PVT1-220ENST00000524165 SMAD2Q15796 467 aaKnown RBP20.87■□□□□ 0.93
PVT1-220ENST00000524165 PTGISQ16647 500 aa20.87■□□□□ 0.93
PVT1-220ENST00000524165 PPP1R13LQ8WUF5 828 aa20.87■□□□□ 0.93
PVT1-220ENST00000524165 DNAJC2Q99543 621 aaKnown RBP20.87■□□□□ 0.93
PVT1-220ENST00000524165 MKNK2Q9HBH9 465 aa20.87■□□□□ 0.93
PVT1-220ENST00000524165 SLC4A4Q9Y6R1 1079 aa20.87■□□□□ 0.93
PVT1-220ENST00000524165 MYO7AQ13402 2215 aa20.87■□□□□ 0.93
PVT1-220ENST00000524165 NLRC5Q86WI3 1866 aa20.87■□□□□ 0.93
PVT1-220ENST00000524165 NKRFO15226 690 aaKnown RBP eCLIP20.86■□□□□ 0.938e-7■■□□□ 12.5
PVT1-220ENST00000524165 NCK2O43639 380 aa20.86■□□□□ 0.93
PVT1-220ENST00000524165 ALAS1P13196 640 aa20.86■□□□□ 0.93
PVT1-220ENST00000524165 IKBKEQ14164 716 aa20.86■□□□□ 0.93
PVT1-220ENST00000524165 TCEAL5Q5H9L2 206 aa20.86■□□□□ 0.93
PVT1-220ENST00000524165 EP400NLQ6ZTU2 488 aa20.86■□□□□ 0.93
PVT1-220ENST00000524165 FAM160B2Q86V87 743 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms