RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 MRPL4Q9BYD3 311 aaKnown RBP6.68□□□□□ -1.34
CTNNA1-222ENST00000520400 FAM126AQ9BYI3 521 aaPredicted RBP6.68□□□□□ -1.34
CTNNA1-222ENST00000520400 NDOR1Q9UHB4 597 aa6.68□□□□□ -1.34
CTNNA1-222ENST00000520400 A0A087X0B3 334 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 SSU72P8A0A1W2PR75 194 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 C7orf72A4D263 438 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 KCNQ2O43526 872 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 RNASE1P07998 156 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 MSL3P1P0C860 447 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 TRHRP34981 398 aaPredicted RBP6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 GALK1P51570 392 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 HK2P52789 917 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 LAPTM5Q13571 262 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 ZNF460Q14592 562 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 ZMYM1Q5SVZ6 1142 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 ABHD17CQ6PCB6 329 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 SLCO6A1Q86UG4 719 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 NLRP10Q86W26 655 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 MMP19Q99542 508 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 CDIP1Q9H305 208 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 TMEM59LQ9UK28 342 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 PCDHA9Q9Y5H5 950 aa6.67□□□□□ -1.34
CTNNA1-222ENST00000520400 NPHP3-ACAD11A0A0J9YXS1 232 aa6.66□□□□□ -1.34
CTNNA1-222ENST00000520400 MEFVO15553 781 aaPredicted RBP6.66□□□□□ -1.34
CTNNA1-222ENST00000520400 CRTAMO95727 393 aa6.66□□□□□ -1.34
CTNNA1-222ENST00000520400 KCNA6P17658 529 aa6.66□□□□□ -1.34
CTNNA1-222ENST00000520400 MASP1P48740 699 aa6.66□□□□□ -1.34
CTNNA1-222ENST00000520400 FNDC3BQ53EP0 1204 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-222ENST00000520400 TM4SF20Q53R12 229 aa6.66□□□□□ -1.34
CTNNA1-222ENST00000520400 KSR1Q8IVT5 923 aa6.66□□□□□ -1.34
CTNNA1-222ENST00000520400 PTPRN2Q92932 1015 aa6.66□□□□□ -1.34
CTNNA1-222ENST00000520400 NINJ1Q92982 152 aa6.66□□□□□ -1.34
CTNNA1-222ENST00000520400 PCMTD2Q9NV79 361 aa6.66□□□□□ -1.34
CTNNA1-222ENST00000520400 CCDC163A0A0D9SF12 145 aa6.65□□□□□ -1.34
CTNNA1-222ENST00000520400 RFPL3O75679 317 aa6.65□□□□□ -1.34
CTNNA1-222ENST00000520400 PAMP19021 973 aa6.65□□□□□ -1.34
CTNNA1-222ENST00000520400 LTBRP36941 435 aa6.65□□□□□ -1.34
CTNNA1-222ENST00000520400 GABREP78334 506 aa6.65□□□□□ -1.34
CTNNA1-222ENST00000520400 DCAF4Q8WV16 495 aa6.65□□□□□ -1.34
CTNNA1-222ENST00000520400 DIO2Q92813 273 aa6.65□□□□□ -1.34
CTNNA1-222ENST00000520400 C19orf44Q9H6X5 657 aa6.65□□□□□ -1.34
CTNNA1-222ENST00000520400 SFMBT1Q9UHJ3 866 aa6.65□□□□□ -1.34
CTNNA1-222ENST00000520400 PCDHA8Q9Y5H6 950 aa6.65□□□□□ -1.34
CTNNA1-222ENST00000520400 TCRBV16S1A1N1A0A5B0 115 aa6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 PSPNO60542 156 aa6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 POU3F3P20264 500 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 LRP8Q14114 963 aa6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 HSF5Q4G112 596 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 E4F1Q66K89 784 aaPredicted RBP6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 SLC23A3Q6PIS1 610 aa6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 NIM1KQ8IY84 436 aa6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 ABI1Q8IZP0 508 aa6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 SYNPOQ8N3V7 929 aa6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 NAT16Q8N8M0 369 aa6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 SHISA4Q96DD7 197 aa6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 GPR27Q9NS67 375 aa6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 GULP1Q9UBP9 304 aa6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 PCDHA2Q9Y5H9 948 aa6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 TNPO3Q9Y5L0 923 aaKnown RBP6.64□□□□□ -1.35
CTNNA1-222ENST00000520400 ANKRD62A6NC57 917 aa6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 BCL6P41182 706 aa6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 MVKQ03426 396 aa6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 KCNAB2Q13303 367 aa6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 PLCL1Q15111 1095 aa6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 ZNF792Q3KQV3 632 aa6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 LBX2Q6XYB7 198 aa6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 MAMDC2Q7Z304 686 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 THNSL2Q86YJ6 484 aa6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 IPO9Q96P70 1041 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 TARS2Q9BW92 718 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 IFT57Q9NWB7 429 aa6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 TNFRSF10DQ9UBN6 386 aa6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 ANGEL1Q9UNK9 670 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-222ENST00000520400 GSG1L2A8MUP6 293 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 WNT11O96014 354 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 FPR2P25090 351 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 GPR85P60893 370 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 FYB2Q5VWT5 728 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 CYP2R1Q6VVX0 501 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 CEP128Q6ZU80 1094 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 TEX2Q8IWB9 1127 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 TP53INP2Q8IXH6 220 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 PCDH19Q8TAB3 1148 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 PI4K2BQ8TCG2 481 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 PLEKHO2Q8TD55 490 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 MFSD3Q96ES6 412 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 MTA3Q9BTC8 594 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 MTFR1LQ9H019 292 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 IMPACTQ9P2X3 320 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 CTNND2Q9UQB3 1225 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 RWDD3Q9Y3V2 267 aa6.62□□□□□ -1.35
CTNNA1-222ENST00000520400 ARVCFO00192 962 aa6.61□□□□□ -1.35
CTNNA1-222ENST00000520400 TBC1D8O95759 1140 aa6.61□□□□□ -1.35
CTNNA1-222ENST00000520400 HPXP02790 462 aa6.61□□□□□ -1.35
CTNNA1-222ENST00000520400 CKMP06732 381 aa6.61□□□□□ -1.35
CTNNA1-222ENST00000520400 RTP1P59025 263 aa6.61□□□□□ -1.35
CTNNA1-222ENST00000520400 GUCY1A3Q02108 690 aa6.61□□□□□ -1.35
CTNNA1-222ENST00000520400 HLA-DQA1Q5Y7H0 255 aa6.61□□□□□ -1.35
CTNNA1-222ENST00000520400 RSPO2Q6UXX9 243 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-222ENST00000520400 FILIP1Q7Z7B0 1213 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms