RNA–Protein interactions for RNA: ENST00000518098.1

LINCR-0001-202, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-202ENST00000518098 CHMP4BQ9H444 224 aaKnown RBP7.11□□□□□ -1.27
LINCR-0001-202ENST00000518098 SUGCTQ9HAC7 445 aa7.11□□□□□ -1.27
LINCR-0001-202ENST00000518098 SIPA1L1O43166 1804 aa7.11□□□□□ -1.27
LINCR-0001-202ENST00000518098 GRIN2DO15399 1336 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 UMODL1Q5DID0 1318 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 RBM47A0AV96 593 aaKnown RBP7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 RFXAPO00287 272 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 NDUFB10O96000 172 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 CXCL10P02778 98 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 RB1P06400 928 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 RARSP54136 660 aaKnown RBP7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 WDR5P61964 334 aaKnown RBP7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 ZP2Q05996 745 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 IKQ13123 557 aaPredicted RBP7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 COL19A1Q14993 1142 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 PPP2R5BQ15173 497 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 LRRC47Q8N1G4 583 aaKnown RBP7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 BANK1Q8NDB2 785 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 DNERQ8NFT8 737 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 SDR42E1Q8WUS8 393 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 STAG1Q8WVM7 1258 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 EDAQ92838 391 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 EAF2Q96CJ1 260 aaPredicted RBP7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 GMCL1Q96IK5 515 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 TRERF1Q96PN7 1200 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 WDR11Q9BZH6 1224 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 CCDC8Q9H0W5 538 aaPredicted RBP7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 NSUN3Q9H649 340 aaKnown RBP7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 CERS4Q9HA82 394 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 RAVER2Q9HCJ3 691 aaKnown RBP7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 A1CFQ9NQ94 594 aaKnown RBP7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 RNF146Q9NTX7 359 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 RIPK3Q9Y572 518 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 FOCADQ5VW36 1801 aa7.1□□□□□ -1.27
LINCR-0001-202ENST00000518098 PLXNA1Q9UIW2 1896 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 H3BNC9 293 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 ADCY6O43306 1168 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 CAND2O75155 1236 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 HMMRO75330 724 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 MYL3P08590 195 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 IFIT2P09913 472 aaKnown RBP7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 CYP2C9P11712 490 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 CASTP20810 708 aaKnown RBP7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 SLC4A3P48751 1232 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 PDE4BQ07343 736 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 SMAD2Q15796 467 aaKnown RBP7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 PTGISQ16647 500 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 TAPT1Q6NXT6 567 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 LRRC8DQ7L1W4 858 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 AACSQ86V21 672 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 OR6J1Q8NGC5 347 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 KIF1BPQ96EK5 621 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 NACAP1Q9BZK3 213 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 CD320Q9NPF0 282 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 TRMT13Q9NUP7 481 aaKnown RBP7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 CYP39A1Q9NYL5 469 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 CLIP2Q9UDT6 1046 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 SLC4A4Q9Y6R1 1079 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 LRRC37A2A6NM11 1700 aa7.09□□□□□ -1.27
LINCR-0001-202ENST00000518098 ASTN1O14525 1302 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 ZBED9Q6R2W3 1325 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 TCRBV5S4A2TA0A5A2 114 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 LINC01553A4QN01 128 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 SOWAHBA6NEL2 793 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 EPOPA6NHQ4 379 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 GFRA3O60609 400 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 MBD4O95243 580 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 MS4A1P11836 297 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 IL9P15248 144 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 ADD2P35612 726 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 SLC1A4P43007 532 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 NT5C2P49902 561 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 PSMC6P62333 389 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 PDE4DQ08499 809 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 PTK7Q13308 1070 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 ZKSCAN2Q63HK3 967 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 MCTP2Q6DN12 878 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 HFE2Q6ZVN8 426 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 FTSJ3Q8IY81 847 aaKnown RBP7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 LCORLQ8N3X6 602 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 FBXL6Q8N531 539 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 C7orf31Q8N865 590 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 APBB2Q92870 758 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 KHSRPQ92945 711 aaKnown RBP eCLIP7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 PBXIP1Q96AQ6 731 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 DYNLL2Q96FJ2 89 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 FGD4Q96M96 766 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 YTHDC1Q96MU7 727 aaKnown RBP7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 C11orf84Q9BUA3 381 aaPredicted RBP7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 ANTXR1Q9H6X2 564 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 ARMT1Q9H993 441 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 HOMER2Q9NSB8 354 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 PAG1Q9NWQ8 432 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 MTMR4Q9NYA4 1195 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 REV3LO60673 3130 aa7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 PRRC2BQ5JSZ5 2229 aaKnown RBP7.08□□□□□ -1.28
LINCR-0001-202ENST00000518098 TMEM232C9JQI7 657 aa7.07□□□□□ -1.28
LINCR-0001-202ENST00000518098 PROB1E7EW31 1015 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms