RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 PTPN11Q06124 597 aaPredicted RBP11.79□□□□□ -0.52
SH2D4A-202ENST00000518040 TKFCQ3LXA3 575 aa11.79□□□□□ -0.52
SH2D4A-202ENST00000518040 BRDTQ58F21 947 aaPredicted RBP11.79□□□□□ -0.52
SH2D4A-202ENST00000518040 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.79□□□□□ -0.52
SH2D4A-202ENST00000518040 KIFC2Q96AC6 838 aa11.79□□□□□ -0.52
SH2D4A-202ENST00000518040 TGS1Q96RS0 853 aaKnown RBP11.79□□□□□ -0.52
SH2D4A-202ENST00000518040 NUP88Q99567 741 aaPredicted RBP11.79□□□□□ -0.52
SH2D4A-202ENST00000518040 VTA1Q9NP79 307 aa11.79□□□□□ -0.52
SH2D4A-202ENST00000518040 TCRBV5S4A2TA0A5A2 114 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 NDUFB10O96000 172 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 TRIM27P14373 513 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 IL9P15248 144 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 ERVK-21P61565 698 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 CNTN2Q02246 1040 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 NFRKBQ6P4R8 1299 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 RPAP2Q8IXW5 612 aaPredicted RBP11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 CCDC155Q8N6L0 562 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 GDPD5Q8WTR4 605 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 MTG1Q9BT17 334 aaPredicted RBP11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 ARMT1Q9H993 441 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 SUGCTQ9HAC7 445 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 BRWD1Q9NSI6 2320 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 KPNA6O60684 536 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 EFCAB14O75071 495 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 PKN1Q16512 942 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 DUSP28Q4G0W2 176 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 TAPT1Q6NXT6 567 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 AACSQ86V21 672 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 NEK9Q8TD19 979 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 RAD9AQ99638 391 aa11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 A1CFQ9NQ94 594 aaKnown RBP11.78□□□□□ -0.52
SH2D4A-202ENST00000518040 RAD50Q92878 1312 aa11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 LOC102724159A0A0B4J2E5 919 aa11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 SOWAHBA6NEL2 793 aa11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 BCAR3O75815 825 aa11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 MBD4O95243 580 aa11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 PURAQ00577 322 aaKnown RBP11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 PWP2Q15269 919 aaKnown RBP11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 KIAA1211Q6ZU35 1233 aa11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 CAGE1Q8TC20 777 aa11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 HOMER2Q9NSB8 354 aa11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 ARPP21Q9UBL0 812 aaPredicted RBP11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 SCN5AQ14524 2016 aa11.77□□□□□ -0.53
SH2D4A-202ENST00000518040 PRKAB2O43741 272 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 PTPN5P54829 565 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 WDR5P61964 334 aaKnown RBP11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 PTPROQ16827 1216 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 FAM47CQ5HY64 1035 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 AFAP1L1Q8TED9 768 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 MKL1Q969V6 931 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 CRBNQ96SW2 442 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 MKNK2Q9HBH9 465 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 ZNF287Q9HBT7 754 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 PDGFCQ9NRA1 345 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 RNF146Q9NTX7 359 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 NOD1Q9Y239 953 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 TANC1Q9C0D5 1861 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 ZBED9Q6R2W3 1325 aa11.76□□□□□ -0.53
SH2D4A-202ENST00000518040 CYP2D7A0A087X1C5 515 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 ABHD14A-ACY1A0A1B0GW23 586 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 GOLIM4O00461 696 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 GJB5O95377 273 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 TIGD5Q53EQ6 642 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 HSP90AB4PQ58FF6 505 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 CNKSR3Q6P9H4 555 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 CTR9Q6PD62 1173 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 HFE2Q6ZVN8 426 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 FBXO16Q8IX29 292 aaPredicted RBP11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 GMCL1P1Q8NEA9 526 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 MORC4Q8TE76 937 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 CHURC1Q8WUH1 139 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 POP1Q99575 1024 aaKnown RBP11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 CLIP2Q9UDT6 1046 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 ADD3Q9UEY8 706 aaKnown RBP11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 GREB1LQ9C091 1923 aaPredicted RBP11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 BAZ2AQ9UIF9 1905 aaKnown RBP11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 LCHNA4D1U4 455 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 NKRFO15226 690 aaKnown RBP eCLIP11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 MYL3P08590 195 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 ADD2P35612 726 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 ZP2Q05996 745 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 NBPF20Q3BBV1 942 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 FAM160B2Q86V87 743 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 ADHFE1Q8IWW8 467 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 MRPL38Q96DV4 380 aaKnown RBP11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 SAMD11Q96NU1 681 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 TRERF1Q96PN7 1200 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 DNAJC2Q99543 621 aaKnown RBP11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 SLC4A4Q9Y6R1 1079 aa11.75□□□□□ -0.53
SH2D4A-202ENST00000518040 ZNF318Q5VUA4 2279 aa11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 LINC01553A4QN01 128 aa11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 POTEMA6NI47 508 aa11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 NCK2O43639 380 aa11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 BMP3P12645 472 aa11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 STAT2P52630 851 aa11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 EEPD1Q7L9B9 569 aa11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 BMP8AQ7Z5Y6 402 aa11.74□□□□□ -0.53
SH2D4A-202ENST00000518040 SPRED2Q7Z698 418 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 292.3 ms