RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 VPS54Q9P1Q0 977 aa23.1■■□□□ 1.29
SMIM20-201ENST00000506197 TAL1P17542 331 aaPredicted RBP23.09■■□□□ 1.29
SMIM20-201ENST00000506197 PDCP20941 246 aa23.09■■□□□ 1.29
SMIM20-201ENST00000506197 NCAPG2Q86XI2 1143 aa23.09■■□□□ 1.29
SMIM20-201ENST00000506197 FAM177A1Q8N128 213 aaPredicted RBP23.09■■□□□ 1.29
SMIM20-201ENST00000506197 TRERF1Q96PN7 1200 aa23.09■■□□□ 1.29
SMIM20-201ENST00000506197 MOV10L1Q9BXT6 1211 aaKnown RBP23.09■■□□□ 1.29
SMIM20-201ENST00000506197 RNF208Q9H0X6 261 aa23.09■■□□□ 1.29
SMIM20-201ENST00000506197 CWC22Q9HCG8 908 aaKnown RBP23.09■■□□□ 1.29
SMIM20-201ENST00000506197 RNF146Q9NTX7 359 aa23.09■■□□□ 1.29
SMIM20-201ENST00000506197 PLXNB2O15031 1838 aa23.08■■□□□ 1.29
SMIM20-201ENST00000506197 ELNP15502 786 aa23.08■■□□□ 1.29
SMIM20-201ENST00000506197 NLRP5P59047 1200 aa23.08■■□□□ 1.29
SMIM20-201ENST00000506197 PXYLP1Q8TE99 480 aa23.08■■□□□ 1.29
SMIM20-201ENST00000506197 SHISA4Q96DD7 197 aa23.08■■□□□ 1.29
SMIM20-201ENST00000506197 IPO9Q96P70 1041 aaKnown RBP23.08■■□□□ 1.29
SMIM20-201ENST00000506197 FBXO40Q9UH90 709 aa23.08■■□□□ 1.29
SMIM20-201ENST00000506197 H3BQV1 296 aa23.07■■□□□ 1.28
SMIM20-201ENST00000506197 INHAP05111 366 aa23.07■■□□□ 1.28
SMIM20-201ENST00000506197 Q3C1V9 767 aa23.07■■□□□ 1.28
SMIM20-201ENST00000506197 WDR78Q5VTH9 848 aa23.07■■□□□ 1.28
SMIM20-201ENST00000506197 LARP1BQ659C4 914 aaKnown RBP23.07■■□□□ 1.28
SMIM20-201ENST00000506197 SHCBP1Q8NEM2 672 aa23.07■■□□□ 1.28
SMIM20-201ENST00000506197 CHST13Q8NET6 341 aa23.07■■□□□ 1.28
SMIM20-201ENST00000506197 MROH8Q9H579 483 aa23.07■■□□□ 1.28
SMIM20-201ENST00000506197 ACAD9Q9H845 621 aa23.07■■□□□ 1.28
SMIM20-201ENST00000506197 RIPK3Q9Y572 518 aa23.07■■□□□ 1.28
SMIM20-201ENST00000506197 ZNFX1Q9P2E3 1918 aaKnown RBP23.07■■□□□ 1.28
SMIM20-201ENST00000506197 SMCO2A6NFE2 343 aa23.06■■□□□ 1.28
SMIM20-201ENST00000506197 GJB1P08034 283 aa23.06■■□□□ 1.28
SMIM20-201ENST00000506197 ERCC3P19447 782 aa23.06■■□□□ 1.28
SMIM20-201ENST00000506197 CALML3P27482 149 aa23.06■■□□□ 1.28
SMIM20-201ENST00000506197 MCF2L2Q86YR7 1114 aa23.06■■□□□ 1.28
SMIM20-201ENST00000506197 CUL5Q93034 780 aa23.06■■□□□ 1.28
SMIM20-201ENST00000506197 GLT8D2Q9H1C3 349 aa23.06■■□□□ 1.28
SMIM20-201ENST00000506197 UNC93B1Q9H1C4 597 aa23.06■■□□□ 1.28
SMIM20-201ENST00000506197 C6orf50Q9HD87 102 aa23.06■■□□□ 1.28
SMIM20-201ENST00000506197 ESYT2A0FGR8 921 aa23.05■■□□□ 1.28
SMIM20-201ENST00000506197 GNA11P29992 359 aa23.05■■□□□ 1.28
SMIM20-201ENST00000506197 GJA8P48165 433 aa23.05■■□□□ 1.28
SMIM20-201ENST00000506197 ADCY7P51828 1080 aa23.05■■□□□ 1.28
SMIM20-201ENST00000506197 MUM1L1Q5H9M0 696 aa23.05■■□□□ 1.28
SMIM20-201ENST00000506197 TYW1BQ6NUM6 668 aa23.05■■□□□ 1.28
SMIM20-201ENST00000506197 PSTPIP2Q9H939 334 aa23.05■■□□□ 1.28
SMIM20-201ENST00000506197 BRMS1Q9HCU9 246 aa23.05■■□□□ 1.28
SMIM20-201ENST00000506197 KCNJ14Q9UNX9 436 aa23.05■■□□□ 1.28
SMIM20-201ENST00000506197 MAPK4P31152 587 aa23.04■■□□□ 1.28
SMIM20-201ENST00000506197 MRPL12P52815 198 aaKnown RBP23.04■■□□□ 1.28
SMIM20-201ENST00000506197 GUCY1B3Q02153 619 aa23.04■■□□□ 1.28
SMIM20-201ENST00000506197 SAFBQ15424 915 aaKnown RBP eCLIP23.04■■□□□ 1.28
SMIM20-201ENST00000506197 KRT40Q6A162 431 aa23.04■■□□□ 1.28
SMIM20-201ENST00000506197 GALNT17Q6IS24 598 aa23.04■■□□□ 1.28
SMIM20-201ENST00000506197 BICD2Q8TD16 824 aa23.04■■□□□ 1.28
SMIM20-201ENST00000506197 CLEC4DQ8WXI8 215 aa23.04■■□□□ 1.28
SMIM20-201ENST00000506197 ZMYND12Q9H0C1 365 aa23.04■■□□□ 1.28
SMIM20-201ENST00000506197 PORCNQ9H237 461 aa23.04■■□□□ 1.28
SMIM20-201ENST00000506197 RIC8AQ9NPQ8 531 aa23.04■■□□□ 1.28
SMIM20-201ENST00000506197 GJB4Q9NTQ9 266 aa23.04■■□□□ 1.28
SMIM20-201ENST00000506197 NFIBO00712 420 aa23.03■■□□□ 1.28
SMIM20-201ENST00000506197 CFBP00751 764 aa23.03■■□□□ 1.28
SMIM20-201ENST00000506197 NSMFQ6X4W1 530 aa23.03■■□□□ 1.28
SMIM20-201ENST00000506197 FBXO18Q8NFZ0 1043 aa23.03■■□□□ 1.28
SMIM20-201ENST00000506197 PHF20Q9BVI0 1012 aa23.03■■□□□ 1.28
SMIM20-201ENST00000506197 IVNS1ABPQ9Y6Y0 642 aa23.03■■□□□ 1.28
SMIM20-201ENST00000506197 VPS37CA5D8V6 355 aaPredicted RBP23.02■■□□□ 1.28
SMIM20-201ENST00000506197 SLC34A2O95436 690 aa23.02■■□□□ 1.28
SMIM20-201ENST00000506197 MMP1P03956 469 aa23.02■■□□□ 1.28
SMIM20-201ENST00000506197 PDIA4P13667 645 aaKnown RBP23.02■■□□□ 1.28
SMIM20-201ENST00000506197 SYT1P21579 422 aa23.02■■□□□ 1.28
SMIM20-201ENST00000506197 TEX2Q8IWB9 1127 aa23.02■■□□□ 1.28
SMIM20-201ENST00000506197 ANKRD35Q8N283 1001 aa23.02■■□□□ 1.28
SMIM20-201ENST00000506197 RGS22Q8NE09 1264 aa23.02■■□□□ 1.28
SMIM20-201ENST00000506197 U2AF1L4Q8WU68 220 aaKnown RBP23.02■■□□□ 1.28
SMIM20-201ENST00000506197 MAF1Q9H063 256 aa23.02■■□□□ 1.28
SMIM20-201ENST00000506197 GJD2Q9UKL4 321 aa23.02■■□□□ 1.28
SMIM20-201ENST00000506197 PCDHA4Q9UN74 947 aa23.02■■□□□ 1.28
SMIM20-201ENST00000506197 PLXNA1Q9UIW2 1896 aa23.01■■□□□ 1.27
SMIM20-201ENST00000506197 GCOM1H8Y6P7 765 aaPredicted RBP23.01■■□□□ 1.27
SMIM20-201ENST00000506197 HMGCRP04035 888 aa23.01■■□□□ 1.27
SMIM20-201ENST00000506197 POLR2MP0CAP2 368 aa23.01■■□□□ 1.27
SMIM20-201ENST00000506197 FCER1AP12319 257 aa23.01■■□□□ 1.27
SMIM20-201ENST00000506197 KRT2P35908 639 aa23.01■■□□□ 1.27
SMIM20-201ENST00000506197 GNL2Q13823 731 aaKnown RBP23.01■■□□□ 1.27
SMIM20-201ENST00000506197 KCTD2Q14681 263 aa23.01■■□□□ 1.27
SMIM20-201ENST00000506197 RNF207Q6ZRF8 634 aa23.01■■□□□ 1.27
SMIM20-201ENST00000506197 SAMD3Q8N6K7 520 aa23.01■■□□□ 1.27
SMIM20-201ENST00000506197 MMP19Q99542 508 aa23.01■■□□□ 1.27
SMIM20-201ENST00000506197 PFASO15067 1338 aa23.01■■□□□ 1.27
SMIM20-201ENST00000506197 OPLAHO14841 1288 aa23■■□□□ 1.27
SMIM20-201ENST00000506197 PLEKHH3Q7Z736 793 aa23■■□□□ 1.27
SMIM20-201ENST00000506197 BLIDQ8IZY5 108 aa23■■□□□ 1.27
SMIM20-201ENST00000506197 REXO1Q8N1G1 1221 aaKnown RBP23■■□□□ 1.27
SMIM20-201ENST00000506197 DAGLBQ8NCG7 672 aa23■■□□□ 1.27
SMIM20-201ENST00000506197 SOCS4Q8WXH5 440 aa23■■□□□ 1.27
SMIM20-201ENST00000506197 MAP3K20Q9NYL2 800 aaKnown RBP23■■□□□ 1.27
SMIM20-201ENST00000506197 ZNF236Q9UL36 1845 aa22.99■■□□□ 1.27
SMIM20-201ENST00000506197 STX6O43752 255 aa22.99■■□□□ 1.27
SMIM20-201ENST00000506197 MCTP1Q6DN14 999 aa22.99■■□□□ 1.27
SMIM20-201ENST00000506197 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.99■■□□□ 1.27
SMIM20-201ENST00000506197 GPR142Q7Z601 462 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms