RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 GMLQ99445 158 aa5.54□□□□□ -1.52
HMGB1P29-201ENST00000505659 PDLIM7Q9NR12 457 aa5.54□□□□□ -1.52
HMGB1P29-201ENST00000505659 SIRT5Q9NXA8 310 aa5.54□□□□□ -1.52
HMGB1P29-201ENST00000505659 NPHP3-ACAD11A0A0J9YXS1 232 aa5.53□□□□□ -1.52
HMGB1P29-201ENST00000505659 HRKO00198 91 aa5.53□□□□□ -1.52
HMGB1P29-201ENST00000505659 NOP56O00567 594 aaKnown RBP5.53□□□□□ -1.52
HMGB1P29-201ENST00000505659 THBDP07204 575 aa5.53□□□□□ -1.52
HMGB1P29-201ENST00000505659 NAT2P11245 290 aa5.53□□□□□ -1.52
HMGB1P29-201ENST00000505659 PI3P19957 117 aa5.53□□□□□ -1.52
HMGB1P29-201ENST00000505659 SF1Q15637 639 aaKnown RBP5.53□□□□□ -1.52
HMGB1P29-201ENST00000505659 FXNQ16595 210 aa5.53□□□□□ -1.52
HMGB1P29-201ENST00000505659 PANK1Q8TE04 598 aa5.53□□□□□ -1.52
HMGB1P29-201ENST00000505659 COPS5Q92905 334 aa5.53□□□□□ -1.52
HMGB1P29-201ENST00000505659 IRF2BPLQ9H1B7 796 aa5.53□□□□□ -1.52
HMGB1P29-201ENST00000505659 ARID1BQ8NFD5 2236 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 A0A1W2PQJ5 194 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 ZC3H12DA2A288 527 aaKnown RBP5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 ARNTLO00327 626 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 NUAK1O60285 661 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 PAMP19021 973 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 ZNF200P98182 395 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 CBX2Q14781 532 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 INF2Q27J81 1249 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 PRSS53Q2L4Q9 553 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 SLC10A6Q3KNW5 377 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 NAALADL2Q58DX5 795 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 POMZP3Q6PJE2 187 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 IGDCC3Q8IVU1 814 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 FRS2Q8WU20 508 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 NKX2-4Q9H2Z4 354 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 BCAS3Q9H6U6 928 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 EPB41L4AQ9HCS5 686 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 TMEFF2Q9UIK5 374 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 CNOT6Q9ULM6 557 aaKnown RBP5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 KCTD3Q9Y597 815 aa5.52□□□□□ -1.53
HMGB1P29-201ENST00000505659 C7orf72A4D263 438 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 N4BP3O15049 544 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 SRGAP3O43295 1099 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 KLF4O43474 513 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 CYBBP04839 570 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 ZSCAN22P10073 491 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 GLI4P10075 376 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 CORO7P57737 925 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 DDR2Q16832 855 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 CIAPIN1Q6FI81 312 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 PAQR3Q6TCH7 311 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 LDHDQ86WU2 507 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 CRACR2BQ8N4Y2 399 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 NPLOC4Q8TAT6 608 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 MZB1Q8WU39 189 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 DPF3Q92784 378 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 MTA3Q9BTC8 594 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 LRP2BPQ9P2M1 347 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 PCDHA5Q9Y5H7 936 aa5.51□□□□□ -1.53
HMGB1P29-201ENST00000505659 F8W031 263 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 ABLIM1O14639 778 aa5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 SNRPB2P08579 225 aaKnown RBP5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 ECI1P42126 302 aa5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 GRIA2P42262 883 aa5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 MAPKAPK2P49137 400 aa5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 ZC3H6P61129 1189 aaKnown RBP5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 PRR5P85299 388 aa5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 OLFML2BQ68BL8 750 aa5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 ZC3H14Q6PJT7 736 aaKnown RBP5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 CCDC103Q8IW40 242 aa5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 TMEFF1Q8IYR6 380 aa5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 LZTR1Q8N653 840 aa5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 NLGN2Q8NFZ4 835 aa5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 ZSCAN18Q8TBC5 510 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 CYP26B1Q9NR63 512 aa5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 BTG4Q9NY30 223 aa5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 SIT1Q9Y3P8 196 aa5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 R3HCC1Q9Y3T6 440 aaKnown RBP5.5□□□□□ -1.53
HMGB1P29-201ENST00000505659 IRS4O14654 1257 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P29-201ENST00000505659 NPHS1O60500 1241 aa5.49□□□□□ -1.53
HMGB1P29-201ENST00000505659 FUCA1P04066 466 aa5.49□□□□□ -1.53
HMGB1P29-201ENST00000505659 FBLN1P23142 703 aa5.49□□□□□ -1.53
HMGB1P29-201ENST00000505659 LIMS1P48059 325 aa5.49□□□□□ -1.53
HMGB1P29-201ENST00000505659 NR1I3Q14994 352 aa5.49□□□□□ -1.53
HMGB1P29-201ENST00000505659 DENND5AQ6IQ26 1287 aa5.49□□□□□ -1.53
HMGB1P29-201ENST00000505659 EEPD1Q7L9B9 569 aa5.49□□□□□ -1.53
HMGB1P29-201ENST00000505659 KREMEN2Q8NCW0 462 aa5.49□□□□□ -1.53
HMGB1P29-201ENST00000505659 SIGLEC10Q96LC7 697 aa5.49□□□□□ -1.53
HMGB1P29-201ENST00000505659 MARCH2Q9P0N8 246 aa5.49□□□□□ -1.53
HMGB1P29-201ENST00000505659 FBXL7Q9UJT9 491 aa5.49□□□□□ -1.53
HMGB1P29-201ENST00000505659 IRAK3Q9Y616 596 aa5.49□□□□□ -1.53
HMGB1P29-201ENST00000505659 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
HMGB1P29-201ENST00000505659 NTRK1P04629 796 aa5.48□□□□□ -1.53
HMGB1P29-201ENST00000505659 MC3RP41968 323 aa5.48□□□□□ -1.53
HMGB1P29-201ENST00000505659 KCNJ6P48051 423 aa5.48□□□□□ -1.53
HMGB1P29-201ENST00000505659 GFRA1P56159 465 aa5.48□□□□□ -1.53
HMGB1P29-201ENST00000505659 TMEM62Q0P6H9 643 aa5.48□□□□□ -1.53
HMGB1P29-201ENST00000505659 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
HMGB1P29-201ENST00000505659 TEX2Q8IWB9 1127 aa5.48□□□□□ -1.53
HMGB1P29-201ENST00000505659 TMEM145Q8NBT3 493 aa5.48□□□□□ -1.53
HMGB1P29-201ENST00000505659 MMP19Q99542 508 aa5.48□□□□□ -1.53
HMGB1P29-201ENST00000505659 DBR1Q9UK59 544 aaKnown RBP5.48□□□□□ -1.53
HMGB1P29-201ENST00000505659 TRBV23OR9-2A0A075B6M9 112 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 A0A1W2PQU0 124 aa5.47□□□□□ -1.53
HMGB1P29-201ENST00000505659 BUB1BO60566 1050 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms