RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 RAB30Q15771 203 aa16.68■□□□□ 0.26
POLR2J3-207ENST00000503564 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
POLR2J3-207ENST00000503564 PRDM12Q9H4Q4 367 aa16.68■□□□□ 0.26
POLR2J3-207ENST00000503564 PRDM6Q9NQX0 595 aa16.68■□□□□ 0.26
POLR2J3-207ENST00000503564 YBX2Q9Y2T7 364 aaKnown RBP16.68■□□□□ 0.26
POLR2J3-207ENST00000503564 FRMPD2Q68DX3 1309 aaPredicted RBP16.68■□□□□ 0.26
POLR2J3-207ENST00000503564 CHD9Q3L8U1 2897 aa16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 RBM47A0AV96 593 aaKnown RBP16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 FGBP02675 491 aa16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 PDHBP11177 359 aa16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 CCL23P55773 120 aa16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 RRP1P56182 461 aaKnown RBP16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 ADGRE1Q14246 886 aa16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 TJAP1Q5JTD0 557 aa16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 AKNAD1Q5T1N1 836 aa16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 ANKRD45Q5TZF3 282 aa16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 SLC30A10Q6XR72 485 aa16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 ZNF589Q86UQ0 364 aaPredicted RBP16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 CLEC4DQ8WXI8 215 aa16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 SYMPKQ92797 1274 aaKnown RBP16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 GAS2L1Q99501 681 aaPredicted RBP16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 ALDH8A1Q9H2A2 487 aaPredicted RBP16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 MTIF3Q9H2K0 278 aaKnown RBP16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 ADD3Q9UEY8 706 aaKnown RBP16.67■□□□□ 0.26
POLR2J3-207ENST00000503564 SNHG28P0DPA3 235 aa16.66■□□□□ 0.26
POLR2J3-207ENST00000503564 PURAQ00577 322 aaKnown RBP16.66■□□□□ 0.26
POLR2J3-207ENST00000503564 MCMDC2Q4G0Z9 681 aa16.66■□□□□ 0.26
POLR2J3-207ENST00000503564 RRP12Q5JTH9 1297 aaKnown RBP16.66■□□□□ 0.26
POLR2J3-207ENST00000503564 OTOP2Q7RTS6 562 aa16.66■□□□□ 0.26
POLR2J3-207ENST00000503564 WDR11Q9BZH6 1224 aa16.66■□□□□ 0.26
POLR2J3-207ENST00000503564 NKX2-4Q9H2Z4 354 aa16.66■□□□□ 0.26
POLR2J3-207ENST00000503564 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
POLR2J3-207ENST00000503564 TOMM22Q9NS69 142 aa16.66■□□□□ 0.26
POLR2J3-207ENST00000503564 MSRAQ9UJ68 235 aa16.66■□□□□ 0.26
POLR2J3-207ENST00000503564 PTPDC1A2A3K4 754 aa16.65■□□□□ 0.26
POLR2J3-207ENST00000503564 HSPD1P10809 573 aaKnown RBP16.65■□□□□ 0.26
POLR2J3-207ENST00000503564 EDNRBP24530 442 aa16.65■□□□□ 0.26
POLR2J3-207ENST00000503564 ZNF543Q08ER8 600 aa16.65■□□□□ 0.26
POLR2J3-207ENST00000503564 TICAM2Q86XR7 235 aa16.65■□□□□ 0.26
POLR2J3-207ENST00000503564 TBC1D10CQ8IV04 446 aa16.65■□□□□ 0.26
POLR2J3-207ENST00000503564 SCLYQ96I15 445 aa16.65■□□□□ 0.26
POLR2J3-207ENST00000503564 TRMT13Q9NUP7 481 aaKnown RBP16.65■□□□□ 0.26
POLR2J3-207ENST00000503564 POLR3EQ9NVU0 708 aa16.65■□□□□ 0.26
POLR2J3-207ENST00000503564 WDR19Q8NEZ3 1342 aa16.65■□□□□ 0.26
POLR2J3-207ENST00000503564 CALML3P27482 149 aa16.64■□□□□ 0.25
POLR2J3-207ENST00000503564 HAND2P61296 217 aa16.64■□□□□ 0.25
POLR2J3-207ENST00000503564 NMIQ13287 307 aaPredicted RBP16.64■□□□□ 0.25
POLR2J3-207ENST00000503564 HDAC1Q13547 482 aaPredicted RBP16.64■□□□□ 0.25
POLR2J3-207ENST00000503564 RNF207Q6ZRF8 634 aa16.64■□□□□ 0.25
POLR2J3-207ENST00000503564 CRBNQ96SW2 442 aa16.64■□□□□ 0.25
POLR2J3-207ENST00000503564 TNKSO95271 1327 aa16.64■□□□□ 0.25
POLR2J3-207ENST00000503564 CCDC171Q6TFL3 1326 aa16.64■□□□□ 0.25
POLR2J3-207ENST00000503564 TET1Q8NFU7 2136 aa16.63■□□□□ 0.25
POLR2J3-207ENST00000503564 MYH6P13533 1939 aa16.63■□□□□ 0.25
POLR2J3-207ENST00000503564 KIAA1217Q5T5P2 1943 aa16.63■□□□□ 0.25
POLR2J3-207ENST00000503564 CYP2C9P11712 490 aa16.63■□□□□ 0.25
POLR2J3-207ENST00000503564 CPT1AP50416 773 aa16.63■□□□□ 0.25
POLR2J3-207ENST00000503564 RABGGTBP53611 331 aa16.63■□□□□ 0.25
POLR2J3-207ENST00000503564 RPS6P62753 249 aaKnown RBP16.63■□□□□ 0.25
POLR2J3-207ENST00000503564 OR6J1Q8NGC5 347 aa16.63■□□□□ 0.25
POLR2J3-207ENST00000503564 TTC14Q96N46 770 aa16.63■□□□□ 0.25
POLR2J3-207ENST00000503564 MTG1Q9BT17 334 aaPredicted RBP16.63■□□□□ 0.25
POLR2J3-207ENST00000503564 ZBTB47Q9UFB7 747 aaPredicted RBP16.63■□□□□ 0.25
POLR2J3-207ENST00000503564 PNMA2Q9UL42 364 aa16.63■□□□□ 0.25
POLR2J3-207ENST00000503564 NEDD4P46934 1319 aa16.63■□□□□ 0.25
POLR2J3-207ENST00000503564 PTPRSQ13332 1948 aa16.62■□□□□ 0.25
POLR2J3-207ENST00000503564 CHD7Q9P2D1 2997 aa16.62■□□□□ 0.25
POLR2J3-207ENST00000503564 MYL3P08590 195 aa16.62■□□□□ 0.25
POLR2J3-207ENST00000503564 PCP11498 1178 aaKnown RBP16.62■□□□□ 0.25
POLR2J3-207ENST00000503564 PPP2R5BQ15173 497 aa16.62■□□□□ 0.25
POLR2J3-207ENST00000503564 RPUSD2Q8IZ73 545 aaKnown RBP16.62■□□□□ 0.25
POLR2J3-207ENST00000503564 PPM1EQ8WY54 764 aa16.62■□□□□ 0.25
POLR2J3-207ENST00000503564 SLC28A3Q9HAS3 691 aa16.62■□□□□ 0.25
POLR2J3-207ENST00000503564 THEGQ9P2T0 379 aa16.62■□□□□ 0.25
POLR2J3-207ENST00000503564 SLC4A7Q9Y6M7 1214 aa16.62■□□□□ 0.25
POLR2J3-207ENST00000503564 TRIP12Q14669 1992 aaPredicted RBP16.61■□□□□ 0.25
POLR2J3-207ENST00000503564 NKRFO15226 690 aaKnown RBP eCLIP16.61■□□□□ 0.25
POLR2J3-207ENST00000503564 PFKMP08237 780 aa16.61■□□□□ 0.25
POLR2J3-207ENST00000503564 SUPT20HL2P0C7V6 817 aa16.61■□□□□ 0.25
POLR2J3-207ENST00000503564 MYOGP15173 224 aa16.61■□□□□ 0.25
POLR2J3-207ENST00000503564 PDE4DQ08499 809 aa16.61■□□□□ 0.25
POLR2J3-207ENST00000503564 TTLL4Q14679 1199 aa16.61■□□□□ 0.25
POLR2J3-207ENST00000503564 MFSD6Q6ZSS7 791 aa16.61■□□□□ 0.25
POLR2J3-207ENST00000503564 DNERQ8NFT8 737 aa16.61■□□□□ 0.25
POLR2J3-207ENST00000503564 SCFD2Q8WU76 684 aa16.61■□□□□ 0.25
POLR2J3-207ENST00000503564 ATXN2LQ8WWM7 1075 aaKnown RBP16.61■□□□□ 0.25
POLR2J3-207ENST00000503564 COPS5Q92905 334 aa16.61■□□□□ 0.25
POLR2J3-207ENST00000503564 PCDHA11Q9Y5I1 949 aa16.61■□□□□ 0.25
POLR2J3-207ENST00000503564 NCOR1O75376 2440 aa16.6■□□□□ 0.25
POLR2J3-207ENST00000503564 MUC3AQ02505 3323 aa16.6■□□□□ 0.25
POLR2J3-207ENST00000503564 A6NJR5 290 aa16.6■□□□□ 0.25
POLR2J3-207ENST00000503564 ARIH2O95376 493 aa16.6■□□□□ 0.25
POLR2J3-207ENST00000503564 NBPF20Q3BBV1 942 aa16.6■□□□□ 0.25
POLR2J3-207ENST00000503564 PPP2R2DQ66LE6 453 aa16.6■□□□□ 0.25
POLR2J3-207ENST00000503564 NFRKBQ6P4R8 1299 aa16.6■□□□□ 0.25
POLR2J3-207ENST00000503564 PPP1R13LQ8WUF5 828 aa16.6■□□□□ 0.25
POLR2J3-207ENST00000503564 CPVLQ9H3G5 476 aa16.6■□□□□ 0.25
POLR2J3-207ENST00000503564 RAD50Q92878 1312 aa16.6■□□□□ 0.25
POLR2J3-207ENST00000503564 ZBBXA8MT70 800 aa16.59■□□□□ 0.25
POLR2J3-207ENST00000503564 TNFRSF10AO00220 468 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms